data_8U3H # _model_server_result.job_id 8To5pwBgA_WiqJe5FsJcPQ _model_server_result.datetime_utc '2025-02-05 12:47:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u3h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8U3H # _exptl.entry_id 8U3H _exptl.method 'ELECTRON MICROSCOPY' # _entity.details 'conjugated to leucine as Fluorenylmethyloxycarbonyl-leucine' _entity.formula_weight 258.7 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Fluorenylmethyloxycarbonyl chloride' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8U3H _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U3H _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id C01 _struct_conn.ptnr1_label_comp_id VP1 _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id VP1 _struct_conn.ptnr1_auth_seq_id 501 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id N _struct_conn.ptnr2_label_comp_id LEU _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id LEU _struct_conn.ptnr2_auth_seq_id 502 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.484 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C15 H11 Cl O2' _chem_comp.formula_weight 258.7 _chem_comp.id VP1 _chem_comp.mon_nstd_flag . _chem_comp.name 'Fluorenylmethyloxycarbonyl chloride' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C09 C08 VP1 doub 374 n y C09 C10 VP1 sing 375 n y C08 C07 VP1 sing 376 n y C10 C11 VP1 doub 377 n y C07 C06 VP1 doub 378 n y C11 C06 VP1 sing 379 n y C11 C17 VP1 sing 380 n n C06 C05 VP1 sing 381 n n C16 C17 VP1 doub 382 n y C16 C15 VP1 sing 383 n y C17 C12 VP1 sing 384 n y O02 C01 VP1 doub 385 n n C04 C05 VP1 sing 386 n n C04 O03 VP1 sing 387 n n C15 C14 VP1 doub 388 n y C05 C12 VP1 sing 389 n n C12 C13 VP1 doub 390 n y C01 O03 VP1 sing 391 n n C14 C13 VP1 sing 392 n y C04 H2 VP1 sing 393 n n C04 H3 VP1 sing 394 n n C05 H4 VP1 sing 395 n n C07 H5 VP1 sing 396 n n C08 H6 VP1 sing 397 n n C09 H7 VP1 sing 398 n n C10 H8 VP1 sing 399 n n C13 H9 VP1 sing 400 n n C14 H10 VP1 sing 401 n n C15 H11 VP1 sing 402 n n C16 H12 VP1 sing 403 n n C01 CL1 VP1 sing 404 n n # _atom_sites.entry_id 8U3H _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VP1 A 1 501 1 VP1 FLI . C 3 LEU A 1 502 1 LEU FLI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 VP1 . . . B 2 127.351 123.18 131.933 1 76.44 ? C01 VP1 501 A 1 HETATM 2 C C04 VP1 . . . B 2 127.157 124.131 134.233 1 76.44 ? C04 VP1 501 A 1 HETATM 3 C C05 VP1 . . . B 2 126.217 123.699 135.377 1 76.44 ? C05 VP1 501 A 1 HETATM 4 C C06 VP1 . . . B 2 125.876 122.298 135.178 1 76.44 ? C06 VP1 501 A 1 HETATM 5 C C07 VP1 . . . B 2 126.619 121.135 135.252 1 76.44 ? C07 VP1 501 A 1 HETATM 6 C C08 VP1 . . . B 2 126.06 119.908 134.957 1 76.44 ? C08 VP1 501 A 1 HETATM 7 C C09 VP1 . . . B 2 124.742 119.812 134.552 1 76.44 ? C09 VP1 501 A 1 HETATM 8 C C10 VP1 . . . B 2 124.016 120.973 134.473 1 76.44 ? C10 VP1 501 A 1 HETATM 9 C C11 VP1 . . . B 2 124.564 122.21 134.785 1 76.44 ? C11 VP1 501 A 1 HETATM 10 C C12 VP1 . . . B 2 125 124.45 135.169 1 76.44 ? C12 VP1 501 A 1 HETATM 11 C C13 VP1 . . . B 2 124.707 125.788 135.226 1 76.44 ? C13 VP1 501 A 1 HETATM 12 C C14 VP1 . . . B 2 123.438 126.271 134.911 1 76.44 ? C14 VP1 501 A 1 HETATM 13 C C15 VP1 . . . B 2 122.441 125.414 134.51 1 76.44 ? C15 VP1 501 A 1 HETATM 14 C C16 VP1 . . . B 2 122.748 124.079 134.435 1 76.44 ? C16 VP1 501 A 1 HETATM 15 C C17 VP1 . . . B 2 124.005 123.597 134.767 1 76.44 ? C17 VP1 501 A 1 HETATM 16 O O02 VP1 . . . B 2 126.912 124.165 131.495 1 76.44 ? O02 VP1 501 A 1 HETATM 17 O O03 VP1 . . . B 2 127.588 123.104 133.348 1 76.44 ? O03 VP1 501 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #