data_8U45 # _model_server_result.job_id g7zqjvpFing2RpMjG0uDHA _model_server_result.datetime_utc '2024-11-26 22:21:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u45 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":506}' # _entry.id 8U45 # _exptl.entry_id 8U45 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.2 _cell.angle_gamma 90 _cell.entry_id 8U45 _cell.length_a 42.91 _cell.length_b 94.592 _cell.length_c 52.925 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U45 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O PRO 177 C PRO 298 1_555 E CA CA . C CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc2 B O ALA 179 C ALA 300 1_555 E CA CA . C CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc3 B OD1 ASP 202 C ASP 323 1_555 E CA CA . C CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc4 B OD2 ASP 202 C ASP 323 1_555 E CA CA . C CA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc5 E CA CA . C CA 501 1_555 L O HOH . C HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc6 E CA CA . C CA 501 1_555 L O HOH . C HOH 638 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc7 E CA CA . C CA 501 1_555 L O HOH . C HOH 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc8 E CA CA . C CA 501 1_555 L O HOH . C HOH 645 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 224 n n C1 C2 PEG sing 225 n n C1 H11 PEG sing 226 n n C1 H12 PEG sing 227 n n O1 HO1 PEG sing 228 n n C2 O2 PEG sing 229 n n C2 H21 PEG sing 230 n n C2 H22 PEG sing 231 n n O2 C3 PEG sing 232 n n C3 C4 PEG sing 233 n n C3 H31 PEG sing 234 n n C3 H32 PEG sing 235 n n C4 O4 PEG sing 236 n n C4 H41 PEG sing 237 n n C4 H42 PEG sing 238 n n O4 HO4 PEG sing 239 n n # _atom_sites.entry_id 8U45 _atom_sites.fract_transf_matrix[1][1] 0.023305 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005468 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010572 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019408 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PEG A 1 201 2 PEG PEG . D 3 PEG A 1 202 5 PEG PEG . E 4 CA C 1 501 501 CA CA . F 5 CL C 1 502 502 CL CL . G 3 PEG C 1 503 1 PEG PEG . H 3 PEG C 1 504 3 PEG PEG . I 3 PEG C 1 505 4 PEG PEG . J 3 PEG C 1 506 6 PEG PEG . K 6 HOH A 1 301 102 HOH HOH . K 6 HOH A 2 302 112 HOH HOH . K 6 HOH A 3 303 55 HOH HOH . K 6 HOH A 4 304 69 HOH HOH . K 6 HOH A 5 305 36 HOH HOH . K 6 HOH A 6 306 110 HOH HOH . K 6 HOH A 7 307 1 HOH HOH . K 6 HOH A 8 308 10 HOH HOH . K 6 HOH A 9 309 37 HOH HOH . K 6 HOH A 10 310 2 HOH HOH . K 6 HOH A 11 311 109 HOH HOH . K 6 HOH A 12 312 32 HOH HOH . K 6 HOH A 13 313 68 HOH HOH . K 6 HOH A 14 314 65 HOH HOH . K 6 HOH A 15 315 90 HOH HOH . K 6 HOH A 16 316 34 HOH HOH . K 6 HOH A 17 317 97 HOH HOH . K 6 HOH A 18 318 77 HOH HOH . K 6 HOH A 19 319 66 HOH HOH . K 6 HOH A 20 320 33 HOH HOH . K 6 HOH A 21 321 113 HOH HOH . K 6 HOH A 22 322 89 HOH HOH . K 6 HOH A 23 323 82 HOH HOH . K 6 HOH A 24 324 96 HOH HOH . K 6 HOH A 25 325 47 HOH HOH . K 6 HOH A 26 326 72 HOH HOH . K 6 HOH A 27 327 35 HOH HOH . K 6 HOH A 28 328 78 HOH HOH . K 6 HOH A 29 329 93 HOH HOH . K 6 HOH A 30 330 81 HOH HOH . K 6 HOH A 31 331 61 HOH HOH . L 6 HOH C 1 601 52 HOH HOH . L 6 HOH C 2 602 15 HOH HOH . L 6 HOH C 3 603 38 HOH HOH . L 6 HOH C 4 604 76 HOH HOH . L 6 HOH C 5 605 22 HOH HOH . L 6 HOH C 6 606 107 HOH HOH . L 6 HOH C 7 607 16 HOH HOH . L 6 HOH C 8 608 58 HOH HOH . L 6 HOH C 9 609 11 HOH HOH . L 6 HOH C 10 610 101 HOH HOH . L 6 HOH C 11 611 24 HOH HOH . L 6 HOH C 12 612 14 HOH HOH . L 6 HOH C 13 613 95 HOH HOH . L 6 HOH C 14 614 39 HOH HOH . L 6 HOH C 15 615 30 HOH HOH . L 6 HOH C 16 616 8 HOH HOH . L 6 HOH C 17 617 18 HOH HOH . L 6 HOH C 18 618 63 HOH HOH . L 6 HOH C 19 619 116 HOH HOH . L 6 HOH C 20 620 115 HOH HOH . L 6 HOH C 21 621 86 HOH HOH . L 6 HOH C 22 622 21 HOH HOH . L 6 HOH C 23 623 31 HOH HOH . L 6 HOH C 24 624 4 HOH HOH . L 6 HOH C 25 625 111 HOH HOH . L 6 HOH C 26 626 29 HOH HOH . L 6 HOH C 27 627 105 HOH HOH . L 6 HOH C 28 628 114 HOH HOH . L 6 HOH C 29 629 28 HOH HOH . L 6 HOH C 30 630 64 HOH HOH . L 6 HOH C 31 631 20 HOH HOH . L 6 HOH C 32 632 40 HOH HOH . L 6 HOH C 33 633 43 HOH HOH . L 6 HOH C 34 634 23 HOH HOH . L 6 HOH C 35 635 17 HOH HOH . L 6 HOH C 36 636 59 HOH HOH . L 6 HOH C 37 637 41 HOH HOH . L 6 HOH C 38 638 12 HOH HOH . L 6 HOH C 39 639 70 HOH HOH . L 6 HOH C 40 640 13 HOH HOH . L 6 HOH C 41 641 67 HOH HOH . L 6 HOH C 42 642 118 HOH HOH . L 6 HOH C 43 643 92 HOH HOH . L 6 HOH C 44 644 108 HOH HOH . L 6 HOH C 45 645 5 HOH HOH . L 6 HOH C 46 646 100 HOH HOH . L 6 HOH C 47 647 9 HOH HOH . L 6 HOH C 48 648 74 HOH HOH . L 6 HOH C 49 649 75 HOH HOH . L 6 HOH C 50 650 44 HOH HOH . L 6 HOH C 51 651 27 HOH HOH . L 6 HOH C 52 652 3 HOH HOH . L 6 HOH C 53 653 26 HOH HOH . L 6 HOH C 54 654 56 HOH HOH . L 6 HOH C 55 655 45 HOH HOH . L 6 HOH C 56 656 25 HOH HOH . L 6 HOH C 57 657 71 HOH HOH . L 6 HOH C 58 658 7 HOH HOH . L 6 HOH C 59 659 50 HOH HOH . L 6 HOH C 60 660 54 HOH HOH . L 6 HOH C 61 661 83 HOH HOH . L 6 HOH C 62 662 104 HOH HOH . L 6 HOH C 63 663 48 HOH HOH . L 6 HOH C 64 664 6 HOH HOH . L 6 HOH C 65 665 51 HOH HOH . L 6 HOH C 66 666 117 HOH HOH . L 6 HOH C 67 667 57 HOH HOH . L 6 HOH C 68 668 94 HOH HOH . L 6 HOH C 69 669 87 HOH HOH . L 6 HOH C 70 670 53 HOH HOH . L 6 HOH C 71 671 73 HOH HOH . L 6 HOH C 72 672 106 HOH HOH . L 6 HOH C 73 673 60 HOH HOH . L 6 HOH C 74 674 42 HOH HOH . L 6 HOH C 75 675 84 HOH HOH . L 6 HOH C 76 676 99 HOH HOH . L 6 HOH C 77 677 62 HOH HOH . L 6 HOH C 78 678 49 HOH HOH . L 6 HOH C 79 679 19 HOH HOH . L 6 HOH C 80 680 103 HOH HOH . L 6 HOH C 81 681 98 HOH HOH . L 6 HOH C 82 682 91 HOH HOH . L 6 HOH C 83 683 80 HOH HOH . L 6 HOH C 84 684 85 HOH HOH . L 6 HOH C 85 685 79 HOH HOH . L 6 HOH C 86 686 46 HOH HOH . L 6 HOH C 87 687 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . J 3 5.566 -5.844 -43.307 1 45.91 ? C1 PEG 506 C 1 HETATM 2 O O1 PEG . . . J 3 5.693 -7.166 -43.843 1 45.92 ? O1 PEG 506 C 1 HETATM 3 C C2 PEG . . . J 3 4.855 -5.781 -41.952 1 49.86 ? C2 PEG 506 C 1 HETATM 4 O O2 PEG . . . J 3 5.546 -6.58 -40.983 1 54.79 ? O2 PEG 506 C 1 HETATM 5 C C3 PEG . . . J 3 5.628 -5.987 -39.681 1 52.06 ? C3 PEG 506 C 1 HETATM 6 C C4 PEG . . . J 3 5.438 -7.061 -38.608 1 52.06 ? C4 PEG 506 C 1 HETATM 7 O O4 PEG . . . J 3 6.661 -7.703 -38.163 1 55.68 ? O4 PEG 506 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #