data_8U4Z # _model_server_result.job_id FXx9S2WGV-bnMiwCFvNaQA _model_server_result.datetime_utc '2024-12-28 09:43:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u4z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8U4Z # _exptl.entry_id 8U4Z _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 620.519 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Mesoheme _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8U4Z _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U4Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 225 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 225 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id FE _struct_conn.ptnr2_label_comp_id MH0 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id MH0 _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.108 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C34 H36 Fe N4 O4' _chem_comp.formula_weight 620.519 _chem_comp.id MH0 _chem_comp.mon_nstd_flag . _chem_comp.name Mesoheme _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBB CAB MH0 sing 235 n n CAB C3B MH0 sing 236 n n CMB C2B MH0 sing 237 n n C3B C2B MH0 doub 238 n n C3B C4B MH0 sing 239 n n C2B C1B MH0 sing 240 n n C4B CHC MH0 sing 241 n n C4B NB MH0 doub 242 n n CHC C1C MH0 doub 243 n n C1B NB MH0 sing 244 n n C1B CHB MH0 doub 245 n n CMC C2C MH0 sing 246 n n C1C C2C MH0 sing 247 n n C1C NC MH0 sing 248 n n NB FE MH0 sing 249 n n CBC CAC MH0 sing 250 n n CHB C4A MH0 sing 251 n n C2C C3C MH0 doub 252 n n NC FE MH0 sing 253 n n NC C4C MH0 doub 254 n n C3C C4C MH0 sing 255 n n C3C CAC MH0 sing 256 n n FE NA MH0 sing 257 n n FE ND MH0 sing 258 n n C4C CHD MH0 sing 259 n n C4A NA MH0 doub 260 n n C4A C3A MH0 sing 261 n n CHD C1D MH0 doub 262 n n NA C1A MH0 sing 263 n n CMA C3A MH0 sing 264 n n C3A C2A MH0 doub 265 n n ND C1D MH0 sing 266 n n ND C4D MH0 doub 267 n n C1D C2D MH0 sing 268 n n C1A C2A MH0 sing 269 n n C1A CHA MH0 doub 270 n n C2A CAA MH0 sing 271 n n C4D CHA MH0 sing 272 n n C4D C3D MH0 sing 273 n n C2D CMD MH0 sing 274 n n C2D C3D MH0 doub 275 n n C3D CAD MH0 sing 276 n n CAA CBA MH0 sing 277 n n CAD CBD MH0 sing 278 n n CBA CGA MH0 sing 279 n n CBD CGD MH0 sing 280 n n O1A CGA MH0 doub 281 n n CGA O2A MH0 sing 282 n n CGD O2D MH0 doub 283 n n CGD O1D MH0 sing 284 n n CHA H1 MH0 sing 285 n n CHB H2 MH0 sing 286 n n CHC H3 MH0 sing 287 n n CHD H4 MH0 sing 288 n n CMA H5 MH0 sing 289 n n CMA H6 MH0 sing 290 n n CMA H7 MH0 sing 291 n n CAA H8 MH0 sing 292 n n CAA H9 MH0 sing 293 n n CBA H10 MH0 sing 294 n n CBA H11 MH0 sing 295 n n O2A H12 MH0 sing 296 n n CMB H13 MH0 sing 297 n n CMB H14 MH0 sing 298 n n CMB H15 MH0 sing 299 n n CAB H16 MH0 sing 300 n n CAB H17 MH0 sing 301 n n CBB H18 MH0 sing 302 n n CBB H19 MH0 sing 303 n n CBB H20 MH0 sing 304 n n CMC H21 MH0 sing 305 n n CMC H22 MH0 sing 306 n n CMC H23 MH0 sing 307 n n CAC H24 MH0 sing 308 n n CAC H25 MH0 sing 309 n n CBC H26 MH0 sing 310 n n CBC H27 MH0 sing 311 n n CBC H28 MH0 sing 312 n n CMD H29 MH0 sing 313 n n CMD H30 MH0 sing 314 n n CMD H31 MH0 sing 315 n n CAD H32 MH0 sing 316 n n CAD H33 MH0 sing 317 n n CBD H34 MH0 sing 318 n n CBD H35 MH0 sing 319 n n O1D H36 MH0 sing 320 n n # _atom_sites.entry_id 8U4Z _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id MH0 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 401 _pdbx_nonpoly_scheme.auth_seq_num 401 _pdbx_nonpoly_scheme.pdb_mon_id MH0 _pdbx_nonpoly_scheme.auth_mon_id HEM _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA MH0 . . . B 2 113.333 131.755 90.51 1 35.4 ? CHA MH0 401 A 1 HETATM 2 C CHB MH0 . . . B 2 116.264 132.328 94.332 1 35.4 ? CHB MH0 401 A 1 HETATM 3 C CHC MH0 . . . B 2 120.092 132.697 91.399 1 35.4 ? CHC MH0 401 A 1 HETATM 4 C CHD MH0 . . . B 2 117.259 131.72 87.627 1 35.4 ? CHD MH0 401 A 1 HETATM 5 C C1A MH0 . . . B 2 113.751 131.889 91.822 1 35.4 ? C1A MH0 401 A 1 HETATM 6 C C2A MH0 . . . B 2 112.958 131.895 93.045 1 35.4 ? C2A MH0 401 A 1 HETATM 7 C C3A MH0 . . . B 2 113.786 132.059 94.072 1 35.4 ? C3A MH0 401 A 1 HETATM 8 C C4A MH0 . . . B 2 115.13 132.164 93.57 1 35.4 ? C4A MH0 401 A 1 HETATM 9 C CMA MH0 . . . B 2 113.362 132.119 95.555 1 35.4 ? CMA MH0 401 A 1 HETATM 10 C CAA MH0 . . . B 2 111.435 131.752 93.275 1 35.4 ? CAA MH0 401 A 1 HETATM 11 C CBA MH0 . . . B 2 110.643 131.017 92.213 1 35.4 ? CBA MH0 401 A 1 HETATM 12 C CGA MH0 . . . B 2 111.078 129.603 92.018 1 35.4 ? CGA MH0 401 A 1 HETATM 13 O O1A MH0 . . . B 2 111.78 129.039 92.877 1 35.4 ? O1A MH0 401 A 1 HETATM 14 O O2A MH0 . . . B 2 110.702 129.037 90.975 1 35.4 ? O2A MH0 401 A 1 HETATM 15 C C1B MH0 . . . B 2 117.55 132.492 93.875 1 35.4 ? C1B MH0 401 A 1 HETATM 16 C C2B MH0 . . . B 2 118.719 132.759 94.682 1 35.4 ? C2B MH0 401 A 1 HETATM 17 C C3B MH0 . . . B 2 119.774 132.857 93.864 1 35.4 ? C3B MH0 401 A 1 HETATM 18 C C4B MH0 . . . B 2 119.299 132.665 92.518 1 35.4 ? C4B MH0 401 A 1 HETATM 19 C CMB MH0 . . . B 2 118.686 132.884 96.218 1 35.4 ? CMB MH0 401 A 1 HETATM 20 C CAB MH0 . . . B 2 121.267 133.14 94.164 1 35.4 ? CAB MH0 401 A 1 HETATM 21 C CBB MH0 . . . B 2 121.74 133.503 95.351 1 35.4 ? CBB MH0 401 A 1 HETATM 22 C C1C MH0 . . . B 2 119.676 132.48 90.114 1 35.4 ? C1C MH0 401 A 1 HETATM 23 C C2C MH0 . . . B 2 120.498 132.543 88.939 1 35.4 ? C2C MH0 401 A 1 HETATM 24 C C3C MH0 . . . B 2 119.717 132.287 87.88 1 35.4 ? C3C MH0 401 A 1 HETATM 25 C C4C MH0 . . . B 2 118.377 132.04 88.37 1 35.4 ? C4C MH0 401 A 1 HETATM 26 C CMC MH0 . . . B 2 122.001 132.878 88.999 1 35.4 ? CMC MH0 401 A 1 HETATM 27 C CAC MH0 . . . B 2 120.077 132.217 86.374 1 35.4 ? CAC MH0 401 A 1 HETATM 28 C CBC MH0 . . . B 2 121.308 132.283 85.871 1 35.4 ? CBC MH0 401 A 1 HETATM 29 C C1D MH0 . . . B 2 115.958 131.618 88.077 1 35.4 ? C1D MH0 401 A 1 HETATM 30 C C2D MH0 . . . B 2 114.808 131.283 87.277 1 35.4 ? C2D MH0 401 A 1 HETATM 31 C C3D MH0 . . . B 2 113.727 131.291 88.058 1 35.4 ? C3D MH0 401 A 1 HETATM 32 C C4D MH0 . . . B 2 114.138 131.634 89.397 1 35.4 ? C4D MH0 401 A 1 HETATM 33 C CMD MH0 . . . B 2 114.833 130.958 85.771 1 35.4 ? CMD MH0 401 A 1 HETATM 34 C CAD MH0 . . . B 2 112.289 130.98 87.595 1 35.4 ? CAD MH0 401 A 1 HETATM 35 C CBD MH0 . . . B 2 111.532 132.296 87.478 1 35.4 ? CBD MH0 401 A 1 HETATM 36 C CGD MH0 . . . B 2 110.257 132.14 86.708 1 35.4 ? CGD MH0 401 A 1 HETATM 37 O O1D MH0 . . . B 2 110.207 131.305 85.783 1 35.4 ? O1D MH0 401 A 1 HETATM 38 O O2D MH0 . . . B 2 109.283 132.861 87.011 1 35.4 ? O2D MH0 401 A 1 HETATM 39 N NA MH0 . . . B 2 115.071 132.057 92.195 1 35.4 ? NA MH0 401 A 1 HETATM 40 N NB MH0 . . . B 2 117.943 132.44 92.556 1 35.4 ? NB MH0 401 A 1 HETATM 41 N NC MH0 . . . B 2 118.394 132.177 89.737 1 35.4 ? NC MH0 401 A 1 HETATM 42 N ND MH0 . . . B 2 115.505 131.83 89.362 1 35.4 ? ND MH0 401 A 1 HETATM 43 FE FE MH0 . . . B 2 116.718 132.22 90.958 1 35.4 ? FE MH0 401 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #