data_8U6D # _model_server_result.job_id A-DULvRV8YJkpwZlNYf8WQ _model_server_result.datetime_utc '2025-01-10 14:28:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u6d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8U6D # _exptl.entry_id 8U6D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 391.248 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{2-[4-chloro-3-(3-chloro-5-cyanophenoxy)phenoxy]ethyl}-N-methylprop-2-enamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.13 _cell.angle_gamma 90 _cell.entry_id 8U6D _cell.length_a 162.651 _cell.length_b 73.629 _cell.length_c 109.303 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U6D _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H16 Cl2 N2 O3' _chem_comp.formula_weight 391.248 _chem_comp.id VTS _chem_comp.mon_nstd_flag . _chem_comp.name N-{2-[4-chloro-3-(3-chloro-5-cyanophenoxy)phenoxy]ethyl}-N-methylprop-2-enamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C6 VTS sing 376 n n C5 N1 VTS sing 377 n n O1 C3 VTS doub 378 n n C6 O2 VTS sing 379 n n C3 N1 VTS sing 380 n n C3 C2 VTS sing 381 n n N1 C4 VTS sing 382 n n O2 C7 VTS sing 383 n n C2 C1 VTS doub 384 n n C8 C7 VTS doub 385 n y C8 C9 VTS sing 386 n y C7 C19 VTS sing 387 n y C9 C10 VTS doub 388 n y C19 C11 VTS doub 389 n y C10 C11 VTS sing 390 n y C10 CL1 VTS sing 391 n n C11 O3 VTS sing 392 n n CL2 C14 VTS sing 393 n n C13 C14 VTS doub 394 n y C13 C12 VTS sing 395 n y O3 C12 VTS sing 396 n n C14 C15 VTS sing 397 n y C12 C18 VTS doub 398 n y C15 C16 VTS doub 399 n y C18 C16 VTS sing 400 n y C16 C17 VTS sing 401 n n C17 N2 VTS trip 402 n n C1 H1 VTS sing 403 n n C1 H2 VTS sing 404 n n C2 H3 VTS sing 405 n n C4 H4 VTS sing 406 n n C4 H5 VTS sing 407 n n C4 H6 VTS sing 408 n n C5 H7 VTS sing 409 n n C5 H8 VTS sing 410 n n C6 H9 VTS sing 411 n n C6 H10 VTS sing 412 n n C8 H11 VTS sing 413 n n C9 H12 VTS sing 414 n n C13 H13 VTS sing 415 n n C15 H14 VTS sing 416 n n C18 H15 VTS sing 417 n n C19 H16 VTS sing 418 n n # _atom_sites.entry_id 8U6D _atom_sites.fract_transf_matrix[1][1] 0.006148 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001098 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013582 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009294 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VTS A 1 601 601 VTS J36 . D 4 HOH A 1 701 85 HOH HOH . D 4 HOH A 2 702 46 HOH HOH . D 4 HOH A 3 703 82 HOH HOH . D 4 HOH A 4 704 121 HOH HOH . D 4 HOH A 5 705 50 HOH HOH . D 4 HOH A 6 706 96 HOH HOH . D 4 HOH A 7 707 34 HOH HOH . D 4 HOH A 8 708 72 HOH HOH . D 4 HOH A 9 709 51 HOH HOH . D 4 HOH A 10 710 70 HOH HOH . D 4 HOH A 11 711 69 HOH HOH . D 4 HOH A 12 712 43 HOH HOH . D 4 HOH A 13 713 49 HOH HOH . D 4 HOH A 14 714 54 HOH HOH . D 4 HOH A 15 715 99 HOH HOH . D 4 HOH A 16 716 14 HOH HOH . D 4 HOH A 17 717 35 HOH HOH . D 4 HOH A 18 718 29 HOH HOH . D 4 HOH A 19 719 86 HOH HOH . D 4 HOH A 20 720 83 HOH HOH . D 4 HOH A 21 721 31 HOH HOH . D 4 HOH A 22 722 52 HOH HOH . D 4 HOH A 23 723 19 HOH HOH . D 4 HOH A 24 724 39 HOH HOH . D 4 HOH A 25 725 15 HOH HOH . D 4 HOH A 26 726 78 HOH HOH . D 4 HOH A 27 727 33 HOH HOH . D 4 HOH A 28 728 16 HOH HOH . D 4 HOH A 29 729 120 HOH HOH . D 4 HOH A 30 730 125 HOH HOH . D 4 HOH A 31 731 37 HOH HOH . D 4 HOH A 32 732 18 HOH HOH . D 4 HOH A 33 733 108 HOH HOH . D 4 HOH A 34 734 60 HOH HOH . D 4 HOH A 35 735 42 HOH HOH . D 4 HOH A 36 736 24 HOH HOH . D 4 HOH A 37 737 38 HOH HOH . D 4 HOH A 38 738 30 HOH HOH . D 4 HOH A 39 739 124 HOH HOH . D 4 HOH A 40 740 59 HOH HOH . D 4 HOH A 41 741 91 HOH HOH . D 4 HOH A 42 742 95 HOH HOH . D 4 HOH A 43 743 5 HOH HOH . D 4 HOH A 44 744 12 HOH HOH . D 4 HOH A 45 745 3 HOH HOH . D 4 HOH A 46 746 26 HOH HOH . D 4 HOH A 47 747 65 HOH HOH . D 4 HOH A 48 748 20 HOH HOH . D 4 HOH A 49 749 109 HOH HOH . D 4 HOH A 50 750 122 HOH HOH . D 4 HOH A 51 751 111 HOH HOH . D 4 HOH A 52 752 58 HOH HOH . D 4 HOH A 53 753 113 HOH HOH . D 4 HOH A 54 754 47 HOH HOH . D 4 HOH A 55 755 62 HOH HOH . D 4 HOH A 56 756 101 HOH HOH . D 4 HOH A 57 757 6 HOH HOH . D 4 HOH A 58 758 9 HOH HOH . D 4 HOH A 59 759 104 HOH HOH . D 4 HOH A 60 760 87 HOH HOH . D 4 HOH A 61 761 106 HOH HOH . D 4 HOH A 62 762 89 HOH HOH . D 4 HOH A 63 763 98 HOH HOH . D 4 HOH A 64 764 67 HOH HOH . D 4 HOH A 65 765 63 HOH HOH . D 4 HOH A 66 766 105 HOH HOH . D 4 HOH A 67 767 77 HOH HOH . D 4 HOH A 68 768 75 HOH HOH . E 4 HOH B 1 501 103 HOH HOH . E 4 HOH B 2 502 115 HOH HOH . E 4 HOH B 3 503 17 HOH HOH . E 4 HOH B 4 504 88 HOH HOH . E 4 HOH B 5 505 79 HOH HOH . E 4 HOH B 6 506 44 HOH HOH . E 4 HOH B 7 507 94 HOH HOH . E 4 HOH B 8 508 81 HOH HOH . E 4 HOH B 9 509 71 HOH HOH . E 4 HOH B 10 510 48 HOH HOH . E 4 HOH B 11 511 73 HOH HOH . E 4 HOH B 12 512 57 HOH HOH . E 4 HOH B 13 513 55 HOH HOH . E 4 HOH B 14 514 41 HOH HOH . E 4 HOH B 15 515 80 HOH HOH . E 4 HOH B 16 516 118 HOH HOH . E 4 HOH B 17 517 76 HOH HOH . E 4 HOH B 18 518 1 HOH HOH . E 4 HOH B 19 519 13 HOH HOH . E 4 HOH B 20 520 61 HOH HOH . E 4 HOH B 21 521 107 HOH HOH . E 4 HOH B 22 522 93 HOH HOH . E 4 HOH B 23 523 74 HOH HOH . E 4 HOH B 24 524 102 HOH HOH . E 4 HOH B 25 525 8 HOH HOH . E 4 HOH B 26 526 21 HOH HOH . E 4 HOH B 27 527 56 HOH HOH . E 4 HOH B 28 528 10 HOH HOH . E 4 HOH B 29 529 22 HOH HOH . E 4 HOH B 30 530 25 HOH HOH . E 4 HOH B 31 531 32 HOH HOH . E 4 HOH B 32 532 84 HOH HOH . E 4 HOH B 33 533 7 HOH HOH . E 4 HOH B 34 534 11 HOH HOH . E 4 HOH B 35 535 4 HOH HOH . E 4 HOH B 36 536 28 HOH HOH . E 4 HOH B 37 537 53 HOH HOH . E 4 HOH B 38 538 27 HOH HOH . E 4 HOH B 39 539 23 HOH HOH . E 4 HOH B 40 540 92 HOH HOH . E 4 HOH B 41 541 36 HOH HOH . E 4 HOH B 42 542 90 HOH HOH . E 4 HOH B 43 543 123 HOH HOH . E 4 HOH B 44 544 110 HOH HOH . E 4 HOH B 45 545 64 HOH HOH . E 4 HOH B 46 546 100 HOH HOH . E 4 HOH B 47 547 112 HOH HOH . E 4 HOH B 48 548 2 HOH HOH . E 4 HOH B 49 549 97 HOH HOH . E 4 HOH B 50 550 40 HOH HOH . E 4 HOH B 51 551 117 HOH HOH . E 4 HOH B 52 552 68 HOH HOH . E 4 HOH B 53 553 66 HOH HOH . E 4 HOH B 54 554 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 VTS . . . C 3 52.145 -41.873 34.567 1 66.49 ? C1 VTS 601 A 1 HETATM 2 C C2 VTS . . . C 3 51.146 -41.028 34.506 1 63.27 ? C2 VTS 601 A 1 HETATM 3 C C3 VTS . . . C 3 51.104 -39.93 33.501 1 67.5 ? C3 VTS 601 A 1 HETATM 4 C C4 VTS . . . C 3 49.117 -39.194 34.699 1 63.04 ? C4 VTS 601 A 1 HETATM 5 C C5 VTS . . . C 3 49.83 -38.061 32.56 1 66.09 ? C5 VTS 601 A 1 HETATM 6 N N2 VTS . . . C 3 46.549 -36.285 41.683 1 69.2 ? N2 VTS 601 A 1 HETATM 7 C C10 VTS . . . C 3 53.027 -35.433 36.879 1 69.69 ? C10 VTS 601 A 1 HETATM 8 C C11 VTS . . . C 3 51.676 -35.473 37.181 1 63.85 ? C11 VTS 601 A 1 HETATM 9 C C6 VTS . . . C 3 50.704 -36.85 32.725 1 62.13 ? C6 VTS 601 A 1 HETATM 10 C C7 VTS . . . C 3 51.245 -36.116 34.932 1 62.81 ? C7 VTS 601 A 1 HETATM 11 C C8 VTS . . . C 3 52.588 -36 34.618 1 61.35 ? C8 VTS 601 A 1 HETATM 12 C C9 VTS . . . C 3 53.484 -35.628 35.598 1 64.93 ? C9 VTS 601 A 1 HETATM 13 O O1 VTS . . . C 3 51.97 -39.77 32.645 1 67.44 ? O1 VTS 601 A 1 HETATM 14 N N1 VTS . . . C 3 50.069 -39.072 33.588 1 68.14 ? N1 VTS 601 A 1 HETATM 15 C C12 VTS . . . C 3 50.079 -34.756 38.791 1 60.33 ? C12 VTS 601 A 1 HETATM 16 C C13 VTS . . . C 3 49.583 -33.622 38.178 1 60.9 ? C13 VTS 601 A 1 HETATM 17 C C14 VTS . . . C 3 48.357 -33.126 38.581 1 64.71 ? C14 VTS 601 A 1 HETATM 18 C C15 VTS . . . C 3 47.588 -33.798 39.519 1 57.93 ? C15 VTS 601 A 1 HETATM 19 C C16 VTS . . . C 3 48.046 -34.988 40.056 1 62.33 ? C16 VTS 601 A 1 HETATM 20 C C17 VTS . . . C 3 47.27 -35.653 41.07 1 68.32 ? C17 VTS 601 A 1 HETATM 21 C C18 VTS . . . C 3 49.308 -35.451 39.692 1 56.58 ? C18 VTS 601 A 1 HETATM 22 C C19 VTS . . . C 3 50.792 -35.91 36.221 1 63.41 ? C19 VTS 601 A 1 HETATM 23 O O2 VTS . . . C 3 50.28 -36.48 34.033 1 60.44 ? O2 VTS 601 A 1 HETATM 24 O O3 VTS . . . C 3 51.289 -35.342 38.477 1 67.63 ? O3 VTS 601 A 1 HETATM 25 CL CL1 VTS . . . C 3 54.133 -34.96 38.125 1 74.07 ? CL1 VTS 601 A 1 HETATM 26 CL CL2 VTS . . . C 3 47.766 -31.652 37.841 1 65.46 ? CL2 VTS 601 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 26 #