data_8U6E # _model_server_result.job_id buY1ylikkDqENDtNWUULiw _model_server_result.datetime_utc '2025-01-10 14:27:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u6e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8U6E # _exptl.entry_id 8U6E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 375.249 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{2-[4-chloro-3-(3-chloro-5-cyanophenoxy)phenyl]ethyl}-N-methylprop-2-enamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.32 _cell.angle_gamma 90 _cell.entry_id 8U6E _cell.length_a 163.37 _cell.length_b 74.022 _cell.length_c 109.137 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U6E _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 445 A ASP 443 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc2 A OD1 ASP 500 A ASP 498 1_555 D MG MG . A MG 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.853 ? # _chem_comp.formula 'C19 H16 Cl2 N2 O2' _chem_comp.formula_weight 375.249 _chem_comp.id VTV _chem_comp.mon_nstd_flag . _chem_comp.name N-{2-[4-chloro-3-(3-chloro-5-cyanophenoxy)phenyl]ethyl}-N-methylprop-2-enamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 N2 VTV sing 380 n n C13 C12 VTV sing 381 n n C14 N2 VTV sing 382 n n N2 C15 VTV sing 383 n n C12 C11 VTV sing 384 n n C18 C11 VTV doub 385 n y C18 C19 VTV sing 386 n y C15 O2 VTV doub 387 n n C15 C16 VTV sing 388 n n C11 C10 VTV sing 389 n y C16 C17 VTV doub 390 n n C19 C1 VTV doub 391 n y C10 C2 VTV doub 392 n y C1 C2 VTV sing 393 n y C1 CL1 VTV sing 394 n n C2 O1 VTV sing 395 n n CL2 C8 VTV sing 396 n n C9 C8 VTV doub 397 n y C9 C3 VTV sing 398 n y O1 C3 VTV sing 399 n n C8 C7 VTV sing 400 n y C3 C4 VTV doub 401 n y C7 C5 VTV doub 402 n y C4 C5 VTV sing 403 n y C5 C6 VTV sing 404 n n C6 N1 VTV trip 405 n n C12 H5 VTV sing 406 n n C12 H6 VTV sing 407 n n C13 H7 VTV sing 408 n n C13 H8 VTV sing 409 n n C10 H4 VTV sing 410 n n C14 H9 VTV sing 411 n n C14 H10 VTV sing 412 n n C14 H11 VTV sing 413 n n C16 H12 VTV sing 414 n n C17 H14 VTV sing 415 n n C17 H13 VTV sing 416 n n C18 H15 VTV sing 417 n n C19 H16 VTV sing 418 n n C4 H1 VTV sing 419 n n C7 H2 VTV sing 420 n n C9 H3 VTV sing 421 n n # _atom_sites.entry_id 8U6E _atom_sites.fract_transf_matrix[1][1] 0.006121 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001115 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013509 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009313 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VTV A 1 601 601 VTV J38 . D 4 MG A 1 602 1 MG MG . E 5 SO4 A 1 603 1 SO4 SO4 . F 6 HOH A 1 701 60 HOH HOH . F 6 HOH A 2 702 61 HOH HOH . F 6 HOH A 3 703 52 HOH HOH . F 6 HOH A 4 704 28 HOH HOH . F 6 HOH A 5 705 64 HOH HOH . F 6 HOH A 6 706 55 HOH HOH . F 6 HOH A 7 707 22 HOH HOH . F 6 HOH A 8 708 57 HOH HOH . F 6 HOH A 9 709 59 HOH HOH . F 6 HOH A 10 710 62 HOH HOH . F 6 HOH A 11 711 53 HOH HOH . F 6 HOH A 12 712 65 HOH HOH . F 6 HOH A 13 713 56 HOH HOH . F 6 HOH A 14 714 40 HOH HOH . F 6 HOH A 15 715 63 HOH HOH . F 6 HOH A 16 716 26 HOH HOH . G 6 HOH B 1 501 54 HOH HOH . G 6 HOH B 2 502 48 HOH HOH . G 6 HOH B 3 503 8 HOH HOH . G 6 HOH B 4 504 14 HOH HOH . G 6 HOH B 5 505 46 HOH HOH . G 6 HOH B 6 506 30 HOH HOH . G 6 HOH B 7 507 19 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C12 VTV . . . C 3 49.847 -29.931 33.914 1 68.72 ? C12 VTV 601 A 1 HETATM 2 C C13 VTV . . . C 3 50.308 -30.973 32.909 1 75.32 ? C13 VTV 601 A 1 HETATM 3 C C15 VTV . . . C 3 50.127 -32.913 34.572 1 76.83 ? C15 VTV 601 A 1 HETATM 4 C C1 VTV . . . C 3 52.981 -29.139 36.673 1 82.57 ? C1 VTV 601 A 1 HETATM 5 C C10 VTV . . . C 3 50.661 -29.484 36.228 1 74.73 ? C10 VTV 601 A 1 HETATM 6 C C11 VTV . . . C 3 50.979 -29.653 34.893 1 77.23 ? C11 VTV 601 A 1 HETATM 7 C C14 VTV . . . C 3 52.113 -32.721 33.104 1 72.01 ? C14 VTV 601 A 1 HETATM 8 C C16 VTV . . . C 3 48.765 -32.495 35.134 1 75.85 ? C16 VTV 601 A 1 HETATM 9 C C17 VTV . . . C 3 48.073 -33.374 35.824 1 87.47 ? C17 VTV 601 A 1 HETATM 10 C C18 VTV . . . C 3 52.287 -29.573 34.438 1 70.07 ? C18 VTV 601 A 1 HETATM 11 C C19 VTV . . . C 3 53.297 -29.314 35.33 1 72.68 ? C19 VTV 601 A 1 HETATM 12 C C2 VTV . . . C 3 51.665 -29.213 37.113 1 78.02 ? C2 VTV 601 A 1 HETATM 13 C C3 VTV . . . C 3 50.229 -28.339 38.813 1 77.54 ? C3 VTV 601 A 1 HETATM 14 C C4 VTV . . . C 3 49.392 -28.896 39.765 1 74.87 ? C4 VTV 601 A 1 HETATM 15 C C5 VTV . . . C 3 48.262 -28.212 40.169 1 79.92 ? C5 VTV 601 A 1 HETATM 16 C C6 VTV . . . C 3 47.324 -28.823 41.199 1 81.01 ? C6 VTV 601 A 1 HETATM 17 C C7 VTV . . . C 3 47.972 -26.965 39.633 1 75.69 ? C7 VTV 601 A 1 HETATM 18 C C8 VTV . . . C 3 48.815 -26.399 38.697 1 74.41 ? C8 VTV 601 A 1 HETATM 19 C C9 VTV . . . C 3 49.952 -27.079 38.289 1 75.4 ? C9 VTV 601 A 1 HETATM 20 N N1 VTV . . . C 3 46.621 -29.266 41.962 1 85.65 ? N1 VTV 601 A 1 HETATM 21 N N2 VTV . . . C 3 50.839 -32.182 33.544 1 76.79 ? N2 VTV 601 A 1 HETATM 22 O O1 VTV . . . C 3 51.387 -29.055 38.469 1 81.85 ? O1 VTV 601 A 1 HETATM 23 O O2 VTV . . . C 3 50.641 -33.9 34.977 1 80.75 ? O2 VTV 601 A 1 HETATM 24 CL CL1 VTV . . . C 3 54.253 -28.811 37.884 1 78.36 ? CL1 VTV 601 A 1 HETATM 25 CL CL2 VTV . . . C 3 48.389 -24.801 38.019 1 82.29 ? CL2 VTV 601 A 1 HETATM 26 H H5 VTV . . . C 3 48.983 -30.303 34.454 1 82.49 ? H5 VTV 601 A 1 HETATM 27 H H6 VTV . . . C 3 49.583 -29.016 33.394 1 82.49 ? H6 VTV 601 A 1 HETATM 28 H H7 VTV . . . C 3 49.464 -31.251 32.287 1 90.42 ? H7 VTV 601 A 1 HETATM 29 H H8 VTV . . . C 3 51.085 -30.537 32.29 1 90.42 ? H8 VTV 601 A 1 HETATM 30 H H4 VTV . . . C 3 49.635 -29.564 36.565 1 89.7 ? H4 VTV 601 A 1 HETATM 31 H H9 VTV . . . C 3 52.455 -32.175 32.229 1 86.44 ? H9 VTV 601 A 1 HETATM 32 H H10 VTV . . . C 3 51.994 -33.772 32.852 1 86.44 ? H10 VTV 601 A 1 HETATM 33 H H11 VTV . . . C 3 52.844 -32.621 33.903 1 86.44 ? H11 VTV 601 A 1 HETATM 34 H H12 VTV . . . C 3 48.381 -31.497 34.967 1 91.05 ? H12 VTV 601 A 1 HETATM 35 H H14 VTV . . . C 3 48.495 -34.365 35.973 1 104.99 ? H14 VTV 601 A 1 HETATM 36 H H13 VTV . . . C 3 47.099 -33.117 36.243 1 104.99 ? H13 VTV 601 A 1 HETATM 37 H H15 VTV . . . C 3 52.51 -29.713 33.388 1 84.11 ? H15 VTV 601 A 1 HETATM 38 H H16 VTV . . . C 3 54.324 -29.246 34.994 1 87.25 ? H16 VTV 601 A 1 HETATM 39 H H1 VTV . . . C 3 49.622 -29.865 40.192 1 89.87 ? H1 VTV 601 A 1 HETATM 40 H H2 VTV . . . C 3 47.082 -26.435 39.949 1 90.85 ? H2 VTV 601 A 1 HETATM 41 H H3 VTV . . . C 3 50.622 -26.631 37.566 1 90.51 ? H3 VTV 601 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 354 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 41 #