data_8U6F # _model_server_result.job_id 7sulpS5HxCMHBRbvh3AVdQ _model_server_result.datetime_utc '2025-01-10 13:51:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u6f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8U6F # _exptl.entry_id 8U6F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 391.248 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{2-[5-chloro-2-(3-chloro-5-cyanophenoxy)phenoxy]ethyl}-N-methylprop-2-enamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.89 _cell.angle_gamma 90 _cell.entry_id 8U6F _cell.length_a 162.969 _cell.length_b 74.363 _cell.length_c 109.503 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U6F _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H16 Cl2 N2 O3' _chem_comp.formula_weight 391.248 _chem_comp.id VU8 _chem_comp.mon_nstd_flag . _chem_comp.name N-{2-[5-chloro-2-(3-chloro-5-cyanophenoxy)phenoxy]ethyl}-N-methylprop-2-enamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 N2 VU8 sing 376 n n C18 C17 VU8 doub 377 n n N2 C14 VU8 sing 378 n n N2 C16 VU8 sing 379 n n C14 C13 VU8 sing 380 n n C13 O2 VU8 sing 381 n n CL1 C1 VU8 sing 382 n n C17 C16 VU8 sing 383 n n C16 O3 VU8 doub 384 n n C19 C1 VU8 doub 385 n y C19 C12 VU8 sing 386 n y C1 C2 VU8 sing 387 n y O2 C12 VU8 sing 388 n n C12 C4 VU8 doub 389 n y C2 C3 VU8 doub 390 n y C4 C3 VU8 sing 391 n y C4 O1 VU8 sing 392 n n O1 C5 VU8 sing 393 n n C11 C5 VU8 doub 394 n y C11 C10 VU8 sing 395 n y C5 C6 VU8 sing 396 n y CL2 C10 VU8 sing 397 n n C10 C9 VU8 doub 398 n y C6 C7 VU8 doub 399 n y C9 C7 VU8 sing 400 n y C7 C8 VU8 sing 401 n n C8 N1 VU8 trip 402 n n C19 H1 VU8 sing 403 n n C18 H2 VU8 sing 404 n n C18 H3 VU8 sing 405 n n C17 H4 VU8 sing 406 n n C3 H5 VU8 sing 407 n n C6 H6 VU8 sing 408 n n C9 H7 VU8 sing 409 n n C11 H8 VU8 sing 410 n n C13 H9 VU8 sing 411 n n C13 H10 VU8 sing 412 n n C14 H11 VU8 sing 413 n n C14 H12 VU8 sing 414 n n C15 H13 VU8 sing 415 n n C15 H14 VU8 sing 416 n n C15 H15 VU8 sing 417 n n C2 H16 VU8 sing 418 n n # _atom_sites.entry_id 8U6F _atom_sites.fract_transf_matrix[1][1] 0.006136 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00107 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013448 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00927 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VU8 A 1 601 601 VU8 J42 . D 4 HOH A 1 701 2 HOH HOH . D 4 HOH A 2 702 13 HOH HOH . D 4 HOH A 3 703 22 HOH HOH . D 4 HOH A 4 704 3 HOH HOH . D 4 HOH A 5 705 27 HOH HOH . D 4 HOH A 6 706 18 HOH HOH . D 4 HOH A 7 707 25 HOH HOH . D 4 HOH A 8 708 30 HOH HOH . D 4 HOH A 9 709 28 HOH HOH . D 4 HOH A 10 710 24 HOH HOH . D 4 HOH A 11 711 29 HOH HOH . D 4 HOH A 12 712 26 HOH HOH . D 4 HOH A 13 713 21 HOH HOH . D 4 HOH A 14 714 11 HOH HOH . E 4 HOH B 1 501 1 HOH HOH . E 4 HOH B 2 502 20 HOH HOH . E 4 HOH B 3 503 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C19 VU8 . . . C 3 53.712 -25.663 33.763 1 66.07 ? C19 VU8 601 A 1 HETATM 2 C C18 VU8 . . . C 3 52.476 -32.537 32.684 1 80.85 ? C18 VU8 601 A 1 HETATM 3 C C17 VU8 . . . C 3 51.721 -32.035 33.647 1 84.88 ? C17 VU8 601 A 1 HETATM 4 C C3 VU8 . . . C 3 54.108 -25.349 36.519 1 68.39 ? C3 VU8 601 A 1 HETATM 5 C C4 VU8 . . . C 3 53.04 -26.057 36.031 1 65.88 ? C4 VU8 601 A 1 HETATM 6 N N1 VU8 . . . C 3 47.98 -27.865 40.698 1 84.58 ? N1 VU8 601 A 1 HETATM 7 C C5 VU8 . . . C 3 51.074 -26.083 37.415 1 71.12 ? C5 VU8 601 A 1 HETATM 8 C C6 VU8 . . . C 3 50.353 -26.85 38.308 1 67.11 ? C6 VU8 601 A 1 HETATM 9 C C7 VU8 . . . C 3 49.303 -26.31 39 1 72.63 ? C7 VU8 601 A 1 HETATM 10 C C8 VU8 . . . C 3 48.544 -27.196 39.977 1 80 ? C8 VU8 601 A 1 HETATM 11 C C9 VU8 . . . C 3 48.951 -24.987 38.788 1 77.59 ? C9 VU8 601 A 1 HETATM 12 N N2 VU8 . . . C 3 51.258 -29.561 32.755 1 76.21 ? N2 VU8 601 A 1 HETATM 13 C C11 VU8 . . . C 3 50.754 -24.749 37.2 1 71.6 ? C11 VU8 601 A 1 HETATM 14 C C12 VU8 . . . C 3 52.87 -26.233 34.693 1 70.23 ? C12 VU8 601 A 1 HETATM 15 C C16 VU8 . . . C 3 51.015 -30.659 33.667 1 84.3 ? C16 VU8 601 A 1 HETATM 16 C C13 VU8 . . . C 3 51.502 -27.223 33.029 1 77.58 ? C13 VU8 601 A 1 HETATM 17 C C14 VU8 . . . C 3 50.482 -28.359 32.962 1 74.14 ? C14 VU8 601 A 1 HETATM 18 C C15 VU8 . . . C 3 52.208 -29.596 31.658 1 76.58 ? C15 VU8 601 A 1 HETATM 19 O O3 VU8 . . . C 3 50.189 -30.437 34.497 1 88.73 ? O3 VU8 601 A 1 HETATM 20 O O2 VU8 . . . C 3 51.771 -27.026 34.378 1 73.73 ? O2 VU8 601 A 1 HETATM 21 C C10 VU8 . . . C 3 49.674 -24.199 37.894 1 72.64 ? C10 VU8 601 A 1 HETATM 22 O O1 VU8 . . . C 3 52.115 -26.751 36.801 1 65.41 ? O1 VU8 601 A 1 HETATM 23 C C2 VU8 . . . C 3 54.973 -24.772 35.603 1 70.26 ? C2 VU8 601 A 1 HETATM 24 C C1 VU8 . . . C 3 54.771 -24.919 34.24 1 67.14 ? C1 VU8 601 A 1 HETATM 25 CL CL1 VU8 . . . C 3 55.884 -24.149 33.082 1 80.75 ? CL1 VU8 601 A 1 HETATM 26 CL CL2 VU8 . . . C 3 49.204 -22.485 37.661 1 82.35 ? CL2 VU8 601 A 1 # _model_server_stats.io_time_ms 116 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #