data_8U6Q # _model_server_result.job_id Is256EDZC-nIs8TCO-o8Hg _model_server_result.datetime_utc '2025-01-25 11:51:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u6q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 8U6Q # _exptl.entry_id 8U6Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 375.42 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-8-{2-[3-oxo-3-(pyrrolidin-1-yl)propoxy]phenoxy}indolizine-2-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.15 _cell.angle_gamma 90 _cell.entry_id 8U6Q _cell.length_a 225.702 _cell.length_b 69.517 _cell.length_c 105.454 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U6Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H21 N3 O3' _chem_comp.formula_weight 375.42 _chem_comp.id VOU _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-8-{2-[3-oxo-3-(pyrrolidin-1-yl)propoxy]phenoxy}indolizine-2-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C9 VOU doub 376 n y C10 C11 VOU sing 377 n y C9 C8 VOU sing 378 n y C11 C12 VOU doub 379 n y C7 C6 VOU sing 380 n n C7 O2 VOU sing 381 n n C8 O2 VOU sing 382 n n C8 C13 VOU doub 383 n y C12 C13 VOU sing 384 n y O1 C1 VOU doub 385 n n C6 C1 VOU sing 386 n n C13 O3 VOU sing 387 n n C1 N1 VOU sing 388 n n O3 C14 VOU sing 389 n n N1 C2 VOU sing 390 n n N1 C5 VOU sing 391 n n C15 C14 VOU doub 392 n y C15 C16 VOU sing 393 n y C2 C3 VOU sing 394 n n C14 C18 VOU sing 395 n y C5 C4 VOU sing 396 n n C16 C17 VOU doub 397 n y C4 C3 VOU sing 398 n n C18 N2 VOU sing 399 n y C18 C19 VOU doub 400 n y C17 N2 VOU sing 401 n y N2 C22 VOU sing 402 n y C19 C20 VOU sing 403 n y C22 C20 VOU doub 404 n y C20 C21 VOU sing 405 n n C21 N3 VOU trip 406 n n C2 H1 VOU sing 407 n n C2 H2 VOU sing 408 n n C15 H3 VOU sing 409 n n C16 H4 VOU sing 410 n n C17 H5 VOU sing 411 n n C3 H6 VOU sing 412 n n C3 H7 VOU sing 413 n n C5 H8 VOU sing 414 n n C5 H9 VOU sing 415 n n C4 H10 VOU sing 416 n n C4 H11 VOU sing 417 n n C6 H12 VOU sing 418 n n C6 H13 VOU sing 419 n n C7 H14 VOU sing 420 n n C7 H15 VOU sing 421 n n C11 H16 VOU sing 422 n n C12 H17 VOU sing 423 n n C10 H18 VOU sing 424 n n C9 H19 VOU sing 425 n n C19 H20 VOU sing 426 n n C22 H21 VOU sing 427 n n # _atom_sites.entry_id 8U6Q _atom_sites.fract_transf_matrix[1][1] 0.004431 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001283 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014385 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009872 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 VOU A 1 601 601 VOU J55 . D 4 HOH A 1 701 1 HOH HOH . D 4 HOH A 2 702 13 HOH HOH . D 4 HOH A 3 703 7 HOH HOH . D 4 HOH A 4 704 11 HOH HOH . D 4 HOH A 5 705 15 HOH HOH . D 4 HOH A 6 706 14 HOH HOH . D 4 HOH A 7 707 16 HOH HOH . D 4 HOH A 8 708 9 HOH HOH . D 4 HOH A 9 709 18 HOH HOH . E 4 HOH B 1 501 3 HOH HOH . E 4 HOH B 2 502 2 HOH HOH . E 4 HOH B 3 503 4 HOH HOH . E 4 HOH B 4 504 5 HOH HOH . E 4 HOH B 5 505 12 HOH HOH . E 4 HOH B 6 506 6 HOH HOH . E 4 HOH B 7 507 8 HOH HOH . E 4 HOH B 8 508 17 HOH HOH . E 4 HOH B 9 509 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 VOU . . . C 3 45.307 -31.978 21.617 1 71.82 ? O2 VOU 601 A 1 HETATM 2 C C2 VOU . . . C 3 44.989 -36.217 23.874 1 76.01 ? C2 VOU 601 A 1 HETATM 3 N N1 VOU . . . C 3 44.545 -34.976 23.29 1 75.65 ? N1 VOU 601 A 1 HETATM 4 C C1 VOU . . . C 3 43.865 -34.848 22.028 1 80.66 ? C1 VOU 601 A 1 HETATM 5 C C15 VOU . . . C 3 46.595 -29.296 23.406 1 80.44 ? C15 VOU 601 A 1 HETATM 6 C C16 VOU . . . C 3 46.353 -28.222 24.185 1 75.89 ? C16 VOU 601 A 1 HETATM 7 C C17 VOU . . . C 3 46.785 -28.213 25.491 1 79.31 ? C17 VOU 601 A 1 HETATM 8 C C3 VOU . . . C 3 45.728 -35.894 25.149 1 78.18 ? C3 VOU 601 A 1 HETATM 9 N N2 VOU . . . C 3 47.447 -29.275 25.983 1 86.09 ? N2 VOU 601 A 1 HETATM 10 C C5 VOU . . . C 3 44.892 -33.876 24.182 1 72.12 ? C5 VOU 601 A 1 HETATM 11 C C4 VOU . . . C 3 46.021 -34.408 25.074 1 72.78 ? C4 VOU 601 A 1 HETATM 12 C C6 VOU . . . C 3 43.45 -33.474 21.531 1 76.59 ? C6 VOU 601 A 1 HETATM 13 O O1 VOU . . . C 3 43.636 -35.813 21.387 1 76 ? O1 VOU 601 A 1 HETATM 14 C C7 VOU . . . C 3 44.609 -32.84 20.779 1 74.74 ? C7 VOU 601 A 1 HETATM 15 N N3 VOU . . . C 3 49.672 -31.504 29.513 1 89.47 ? N3 VOU 601 A 1 HETATM 16 C C11 VOU . . . C 3 48.723 -30.423 19.852 1 71.05 ? C11 VOU 601 A 1 HETATM 17 C C12 VOU . . . C 3 48.705 -30.694 21.208 1 74.53 ? C12 VOU 601 A 1 HETATM 18 C C13 VOU . . . C 3 47.562 -31.206 21.791 1 70.65 ? C13 VOU 601 A 1 HETATM 19 C C14 VOU . . . C 3 47.268 -30.355 23.924 1 78.9 ? C14 VOU 601 A 1 HETATM 20 C C10 VOU . . . C 3 47.603 -30.669 19.083 1 68.32 ? C10 VOU 601 A 1 HETATM 21 C C8 VOU . . . C 3 46.448 -31.458 21.024 1 69.91 ? C8 VOU 601 A 1 HETATM 22 C C9 VOU . . . C 3 46.464 -31.188 19.668 1 69.32 ? C9 VOU 601 A 1 HETATM 23 C C18 VOU . . . C 3 47.693 -30.325 25.245 1 82.12 ? C18 VOU 601 A 1 HETATM 24 C C19 VOU . . . C 3 48.381 -31.209 26.065 1 77.79 ? C19 VOU 601 A 1 HETATM 25 C C20 VOU . . . C 3 48.499 -30.554 27.331 1 83.25 ? C20 VOU 601 A 1 HETATM 26 C C21 VOU . . . C 3 49.173 -31.103 28.579 1 87.18 ? C21 VOU 601 A 1 HETATM 27 C C22 VOU . . . C 3 47.865 -29.312 27.192 1 82.44 ? C22 VOU 601 A 1 HETATM 28 O O3 VOU . . . C 3 47.536 -31.492 23.158 1 69.88 ? O3 VOU 601 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #