data_8U7B # _model_server_result.job_id HXTHA-LoQapRuGRlJxLssA _model_server_result.datetime_utc '2024-10-10 12:14:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u7b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":603}' # _entry.id 8U7B # _exptl.entry_id 8U7B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 115.13 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROLINE _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8U7B _cell.length_a 197.181 _cell.length_b 197.181 _cell.length_c 183.407 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U7B _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 J N N ? 3 K N N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 211 _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 211 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id I _struct_conn.ptnr2_label_atom_id MN _struct_conn.ptnr2_label_comp_id MN _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id MN _struct_conn.ptnr2_auth_seq_id 602 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.499 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C5 H9 N O2' _chem_comp.formula_weight 115.13 _chem_comp.id PRO _chem_comp.mon_nstd_flag y _chem_comp.name PROLINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PRO sing 260 n n N CD PRO sing 261 n n N H PRO sing 262 n n CA C PRO sing 263 n n CA CB PRO sing 264 n n CA HA PRO sing 265 n n C O PRO doub 266 n n C OXT PRO sing 267 n n CB CG PRO sing 268 n n CB HB2 PRO sing 269 n n CB HB3 PRO sing 270 n n CG CD PRO sing 271 n n CG HG2 PRO sing 272 n n CG HG3 PRO sing 273 n n CD HD2 PRO sing 274 n n CD HD3 PRO sing 275 n n OXT HXT PRO sing 276 n n # _atom_sites.entry_id 8U7B _atom_sites.fract_transf_matrix[1][1] 0.005071 _atom_sites.fract_transf_matrix[1][2] 0.002928 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005856 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005452 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PRO B 1 501 501 PRO PRO . D 3 PRO B 1 502 601 PRO PRO . E 3 PRO B 1 503 801 PRO PRO . F 3 PRO B 1 504 901 PRO PRO . G 3 PRO B 1 505 601 PRO PRO . H 4 MN C 1 601 1 MN MN . I 4 MN C 1 602 2 MN MN . J 3 PRO C 1 603 701 PRO PRO . K 3 PRO C 1 604 801 PRO PRO . L 5 HOH B 1 601 9 HOH HOH . L 5 HOH B 2 602 33 HOH HOH . L 5 HOH B 3 603 77 HOH HOH . L 5 HOH B 4 604 28 HOH HOH . L 5 HOH B 5 605 72 HOH HOH . L 5 HOH B 6 606 12 HOH HOH . L 5 HOH B 7 607 34 HOH HOH . L 5 HOH B 8 608 84 HOH HOH . L 5 HOH B 9 609 6 HOH HOH . L 5 HOH B 10 610 85 HOH HOH . L 5 HOH B 11 611 7 HOH HOH . L 5 HOH B 12 612 70 HOH HOH . L 5 HOH B 13 613 11 HOH HOH . L 5 HOH B 14 614 1 HOH HOH . L 5 HOH B 15 615 79 HOH HOH . L 5 HOH B 16 616 71 HOH HOH . L 5 HOH B 17 617 20 HOH HOH . L 5 HOH B 18 618 26 HOH HOH . L 5 HOH B 19 619 23 HOH HOH . L 5 HOH B 20 620 94 HOH HOH . L 5 HOH B 21 621 90 HOH HOH . L 5 HOH B 22 622 27 HOH HOH . L 5 HOH B 23 623 55 HOH HOH . L 5 HOH B 24 624 21 HOH HOH . L 5 HOH B 25 625 22 HOH HOH . L 5 HOH B 26 626 91 HOH HOH . L 5 HOH B 27 627 51 HOH HOH . L 5 HOH B 28 628 73 HOH HOH . L 5 HOH B 29 629 29 HOH HOH . L 5 HOH B 30 630 74 HOH HOH . L 5 HOH B 31 631 65 HOH HOH . L 5 HOH B 32 632 61 HOH HOH . L 5 HOH B 33 633 31 HOH HOH . L 5 HOH B 34 634 24 HOH HOH . L 5 HOH B 35 635 54 HOH HOH . L 5 HOH B 36 636 41 HOH HOH . L 5 HOH B 37 637 25 HOH HOH . M 5 HOH C 1 701 32 HOH HOH . M 5 HOH C 2 702 50 HOH HOH . M 5 HOH C 3 703 92 HOH HOH . M 5 HOH C 4 704 68 HOH HOH . M 5 HOH C 5 705 63 HOH HOH . M 5 HOH C 6 706 15 HOH HOH . M 5 HOH C 7 707 86 HOH HOH . M 5 HOH C 8 708 87 HOH HOH . M 5 HOH C 9 709 88 HOH HOH . M 5 HOH C 10 710 78 HOH HOH . M 5 HOH C 11 711 81 HOH HOH . M 5 HOH C 12 712 64 HOH HOH . M 5 HOH C 13 713 95 HOH HOH . M 5 HOH C 14 714 83 HOH HOH . M 5 HOH C 15 715 66 HOH HOH . M 5 HOH C 16 716 18 HOH HOH . M 5 HOH C 17 717 59 HOH HOH . M 5 HOH C 18 718 14 HOH HOH . M 5 HOH C 19 719 82 HOH HOH . M 5 HOH C 20 720 80 HOH HOH . M 5 HOH C 21 721 42 HOH HOH . M 5 HOH C 22 722 38 HOH HOH . M 5 HOH C 23 723 44 HOH HOH . M 5 HOH C 24 724 96 HOH HOH . M 5 HOH C 25 725 93 HOH HOH . M 5 HOH C 26 726 19 HOH HOH . M 5 HOH C 27 727 69 HOH HOH . M 5 HOH C 28 728 52 HOH HOH . M 5 HOH C 29 729 3 HOH HOH . M 5 HOH C 30 730 75 HOH HOH . M 5 HOH C 31 731 17 HOH HOH . M 5 HOH C 32 732 97 HOH HOH . M 5 HOH C 33 733 76 HOH HOH . M 5 HOH C 34 734 39 HOH HOH . M 5 HOH C 35 735 57 HOH HOH . M 5 HOH C 36 736 56 HOH HOH . M 5 HOH C 37 737 67 HOH HOH . M 5 HOH C 38 738 43 HOH HOH . M 5 HOH C 39 739 47 HOH HOH . M 5 HOH C 40 740 45 HOH HOH . M 5 HOH C 41 741 36 HOH HOH . M 5 HOH C 42 742 53 HOH HOH . M 5 HOH C 43 743 37 HOH HOH . M 5 HOH C 44 744 8 HOH HOH . M 5 HOH C 45 745 58 HOH HOH . M 5 HOH C 46 746 16 HOH HOH . M 5 HOH C 47 747 13 HOH HOH . M 5 HOH C 48 748 89 HOH HOH . M 5 HOH C 49 749 30 HOH HOH . M 5 HOH C 50 750 60 HOH HOH . M 5 HOH C 51 751 35 HOH HOH . M 5 HOH C 52 752 5 HOH HOH . M 5 HOH C 53 753 46 HOH HOH . M 5 HOH C 54 754 49 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PRO . . . J 3 -19.882 78.747 -14.471 1 71.2 ? N PRO 603 C 1 HETATM 2 C CA PRO . . . J 3 -19.114 78.397 -13.27 1 71.53 ? CA PRO 603 C 1 HETATM 3 C C PRO . . . J 3 -19.109 79.52 -12.232 1 80.93 ? C PRO 603 C 1 HETATM 4 O O PRO . . . J 3 -18.744 79.29 -11.077 1 80.29 ? O PRO 603 C 1 HETATM 5 C CB PRO . . . J 3 -17.701 78.148 -13.812 1 64.15 ? CB PRO 603 C 1 HETATM 6 C CG PRO . . . J 3 -17.865 77.963 -15.288 1 69.89 ? CG PRO 603 C 1 HETATM 7 C CD PRO . . . J 3 -19.033 78.805 -15.671 1 69.68 ? CD PRO 603 C 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #