data_8U86
#
_model_server_result.job_id            thh3dLIVr7_90zm5OQdfpA 
_model_server_result.datetime_utc      '2024-11-04 23:58:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8u86 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":801}' 
#
_entry.id    8U86 
#
_exptl.entry_id    8U86 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              618.503 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEME B/C' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8U86 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8U86 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 J N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 268 A HIS 268 1_555 D FE HEB . A HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? 
metalc ? metalc2 A NE2 HIS 356 A HIS 356 1_555 D FE HEB . A HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? 
metalc ? metalc3 A NE2 HIS 369 A HIS 369 1_555 C FE HEB . A HEB 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? 
metalc ? metalc4 A SG CYS 568 A CYS 568 1_555 I ZN ZN . A ZN 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc5 A SG CYS 571 A CYS 571 1_555 I ZN ZN . A ZN 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc6 I ZN ZN . A ZN 807 1_555 B SG CYS 568 C CYS 568 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc7 I ZN ZN . A ZN 807 1_555 B SG CYS 571 C CYS 571 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc8 B NE2 HIS 268 C HIS 268 1_555 K FE HEB . C HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? 
metalc ? metalc9 B NE2 HIS 356 C HIS 356 1_555 K FE HEB . C HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc10 B NE2 HIS 369 C HIS 369 1_555 J FE HEB . C HEB 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? 
#
_chem_comp.formula           'C34 H34 Fe N4 O4' 
_chem_comp.formula_weight    618.503 
_chem_comp.id                HEB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEME B/C' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'HYBRID BETWEEN B AND C TYPE HEMES (PROTOPORPHYRIN IX CONTAINING FE)' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE NA HEB sing 288 n n 
FE NB HEB sing 289 n n 
FE NC HEB sing 290 n n 
FE ND HEB sing 291 n n 
CHA C1A HEB doub 292 n n 
CHA C4D HEB sing 293 n n 
CHA HHA HEB sing 294 n n 
CHB C4A HEB doub 295 n n 
CHB C1B HEB sing 296 n n 
CHB HHB HEB sing 297 n n 
CHC C4B HEB doub 298 n n 
CHC C1C HEB sing 299 n n 
CHC HHC HEB sing 300 n n 
CHD C4C HEB sing 301 n n 
CHD C1D HEB doub 302 n n 
CHD HHD HEB sing 303 n n 
NA C1A HEB sing 304 n n 
NA C4A HEB sing 305 n n 
C1A C2A HEB sing 306 n n 
C2A C3A HEB doub 307 n n 
C2A CAA HEB sing 308 n n 
C3A C4A HEB sing 309 n n 
C3A CMA HEB sing 310 n n 
CMA HMA1 HEB sing 311 n n 
CMA HMA2 HEB sing 312 n n 
CMA HMA3 HEB sing 313 n n 
CAA CBA HEB sing 314 n n 
CAA HAA1 HEB sing 315 n n 
CAA HAA2 HEB sing 316 n n 
CBA CGA HEB sing 317 n n 
CBA HBA1 HEB sing 318 n n 
CBA HBA2 HEB sing 319 n n 
CGA O1A HEB doub 320 n n 
CGA O2A HEB sing 321 n n 
O2A H2A HEB sing 322 n n 
NB C1B HEB doub 323 n n 
NB C4B HEB sing 324 n n 
C1B C2B HEB sing 325 n n 
C2B C3B HEB doub 326 n n 
C2B CMB HEB sing 327 n n 
C3B C4B HEB sing 328 n n 
C3B CAB HEB sing 329 n n 
CMB HMB1 HEB sing 330 n n 
CMB HMB2 HEB sing 331 n n 
CMB HMB3 HEB sing 332 n n 
CAB CBB HEB sing 333 n n 
CAB HAB HEB sing 334 n n 
CAB HAB2 HEB sing 335 n n 
CBB HBB1 HEB sing 336 n n 
CBB HBB2 HEB sing 337 n n 
CBB HBB3 HEB sing 338 n n 
NC C1C HEB sing 339 n y 
NC C4C HEB sing 340 n y 
C1C C2C HEB doub 341 n y 
C2C C3C HEB sing 342 n y 
C2C CMC HEB sing 343 n n 
C3C C4C HEB doub 344 n y 
C3C CAC HEB sing 345 n n 
CMC HMC1 HEB sing 346 n n 
CMC HMC2 HEB sing 347 n n 
CMC HMC3 HEB sing 348 n n 
CAC CBC HEB doub 349 n n 
CAC HAC HEB sing 350 n n 
CBC HBC1 HEB sing 351 n n 
CBC HBC2 HEB sing 352 n n 
ND C1D HEB sing 353 n n 
ND C4D HEB doub 354 n n 
C1D C2D HEB sing 355 n n 
C2D C3D HEB doub 356 n n 
C2D CMD HEB sing 357 n n 
C3D C4D HEB sing 358 n n 
C3D CAD HEB sing 359 n n 
CMD HMD1 HEB sing 360 n n 
CMD HMD2 HEB sing 361 n n 
CMD HMD3 HEB sing 362 n n 
CAD CBD HEB sing 363 n n 
CAD HAD1 HEB sing 364 n n 
CAD HAD2 HEB sing 365 n n 
CBD CGD HEB sing 366 n n 
CBD HBD1 HEB sing 367 n n 
CBD HBD2 HEB sing 368 n n 
CGD O1D HEB doub 369 n n 
CGD O2D HEB sing 370 n n 
O2D H2D HEB sing 371 n n 
#
_atom_sites.entry_id                     8U86 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEB A 1 801 801 HEB HEB . 
D 2 HEB A 1 802 851 HEB HEB . 
E 3 NDP A 1 803 901 NDP NDP . 
F 4 FAD A 1 804 951 FAD FAD . 
G 5 D12 A 1 805 1001 D12 D12 . 
H 6 D10 A 1 806 1101 D10 D10 . 
I 7 ZN A 1 807 1 ZN ZN . 
J 2 HEB C 1 801 801 HEB HEB . 
K 2 HEB C 1 802 851 HEB HEB . 
L 3 NDP C 1 803 901 NDP NDP . 
M 4 FAD C 1 804 951 FAD FAD . 
N 5 D12 C 1 805 1001 D12 D12 . 
O 6 D10 C 1 806 1101 D10 D10 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE HEB . . . C 2 115.075 117.985 110.24 1 2.07 ? FE HEB 801 A 1 
HETATM 2 C CHA HEB . . . C 2 116.787 120.688 109.006 1 2.07 ? CHA HEB 801 A 1 
HETATM 3 C CHB HEB . . . C 2 114.362 116.959 107.026 1 2.07 ? CHB HEB 801 A 1 
HETATM 4 C CHC HEB . . . C 2 113.498 115.309 111.509 1 2.07 ? CHC HEB 801 A 1 
HETATM 5 C CHD HEB . . . C 2 115.789 119.088 113.527 1 2.07 ? CHD HEB 801 A 1 
HETATM 6 N NA HEB . . . C 2 115.498 118.698 108.355 1 2.07 ? NA HEB 801 A 1 
HETATM 7 C C1A HEB . . . C 2 116.216 119.81 108.105 1 2.07 ? C1A HEB 801 A 1 
HETATM 8 C C2A HEB . . . C 2 116.293 119.965 106.68 1 2.07 ? C2A HEB 801 A 1 
HETATM 9 C C3A HEB . . . C 2 115.612 118.914 106.115 1 2.07 ? C3A HEB 801 A 1 
HETATM 10 C C4A HEB . . . C 2 115.108 118.114 107.193 1 2.07 ? C4A HEB 801 A 1 
HETATM 11 C CMA HEB . . . C 2 115.407 118.622 104.652 1 2.07 ? CMA HEB 801 A 1 
HETATM 12 C CAA HEB . . . C 2 117.017 121.085 105.985 1 2.07 ? CAA HEB 801 A 1 
HETATM 13 C CBA HEB . . . C 2 118.33 120.654 105.313 1 2.07 ? CBA HEB 801 A 1 
HETATM 14 C CGA HEB . . . C 2 119.53 121.272 106.012 1 2.07 ? CGA HEB 801 A 1 
HETATM 15 O O1A HEB . . . C 2 119.794 122.464 105.751 1 2.07 ? O1A HEB 801 A 1 
HETATM 16 O O2A HEB . . . C 2 120.116 120.554 106.842 1 2.07 ? O2A HEB 801 A 1 
HETATM 17 N NB HEB . . . C 2 114.12 116.426 109.426 1 2.07 ? NB HEB 801 A 1 
HETATM 18 C C1B HEB . . . C 2 113.936 116.195 108.102 1 2.07 ? C1B HEB 801 A 1 
HETATM 19 C C2B HEB . . . C 2 113.195 114.979 107.969 1 2.07 ? C2B HEB 801 A 1 
HETATM 20 C C3B HEB . . . C 2 112.965 114.519 109.239 1 2.07 ? C3B HEB 801 A 1 
HETATM 21 C C4B HEB . . . C 2 113.552 115.45 110.144 1 2.07 ? C4B HEB 801 A 1 
HETATM 22 C CMB HEB . . . C 2 112.787 114.376 106.656 1 2.07 ? CMB HEB 801 A 1 
HETATM 23 C CAB HEB . . . C 2 112.227 113.298 109.693 1 2.07 ? CAB HEB 801 A 1 
HETATM 24 C CBB HEB . . . C 2 112.713 111.988 109.125 1 2.07 ? CBB HEB 801 A 1 
HETATM 25 N NC HEB . . . C 2 114.708 117.328 112.158 1 2.07 ? NC HEB 801 A 1 
HETATM 26 C C1C HEB . . . C 2 114.033 116.191 112.395 1 2.07 ? C1C HEB 801 A 1 
HETATM 27 C C2C HEB . . . C 2 113.937 115.99 113.795 1 2.07 ? C2C HEB 801 A 1 
HETATM 28 C C3C HEB . . . C 2 114.579 117.047 114.374 1 2.07 ? C3C HEB 801 A 1 
HETATM 29 C C4C HEB . . . C 2 115.078 117.908 113.339 1 2.07 ? C4C HEB 801 A 1 
HETATM 30 C CMC HEB . . . C 2 113.24 114.814 114.403 1 2.07 ? CMC HEB 801 A 1 
HETATM 31 C CAC HEB . . . C 2 114.737 117.277 115.851 1 2.07 ? CAC HEB 801 A 1 
HETATM 32 C CBC HEB . . . C 2 115.965 117.363 116.395 1 2.07 ? CBC HEB 801 A 1 
HETATM 33 N ND HEB . . . C 2 116.101 119.593 111.109 1 2.07 ? ND HEB 801 A 1 
HETATM 34 C C1D HEB . . . C 2 116.261 119.839 112.448 1 2.07 ? C1D HEB 801 A 1 
HETATM 35 C C2D HEB . . . C 2 117.03 121.051 112.56 1 2.07 ? C2D HEB 801 A 1 
HETATM 36 C C3D HEB . . . C 2 117.303 121.489 111.29 1 2.07 ? C3D HEB 801 A 1 
HETATM 37 C C4D HEB . . . C 2 116.705 120.559 110.381 1 2.07 ? C4D HEB 801 A 1 
HETATM 38 C CMD HEB . . . C 2 117.466 121.726 113.823 1 2.07 ? CMD HEB 801 A 1 
HETATM 39 C CAD HEB . . . C 2 118.074 122.725 110.896 1 2.07 ? CAD HEB 801 A 1 
HETATM 40 C CBD HEB . . . C 2 117.107 123.84 110.512 1 2.07 ? CBD HEB 801 A 1 
HETATM 41 C CGD HEB . . . C 2 117.67 124.837 109.517 1 2.07 ? CGD HEB 801 A 1 
HETATM 42 O O1D HEB . . . C 2 116.969 125.068 108.508 1 2.07 ? O1D HEB 801 A 1 
HETATM 43 O O2D HEB . . . C 2 118.543 125.603 109.969 1 2.07 ? O2D HEB 801 A 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           43 
#