data_8U86
#
_model_server_result.job_id            mZ_GVoAhPvl7ZwOn3bvNmQ 
_model_server_result.datetime_utc      '2024-11-05 00:02:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8u86 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":803}' 
#
_entry.id    8U86 
#
_exptl.entry_id    8U86 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8U86 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8U86 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 268 A HIS 268 1_555 D FE HEB . A HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? 
metalc ? metalc2 A NE2 HIS 356 A HIS 356 1_555 D FE HEB . A HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? 
metalc ? metalc3 A NE2 HIS 369 A HIS 369 1_555 C FE HEB . A HEB 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? 
metalc ? metalc4 A SG CYS 568 A CYS 568 1_555 I ZN ZN . A ZN 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc5 A SG CYS 571 A CYS 571 1_555 I ZN ZN . A ZN 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc6 I ZN ZN . A ZN 807 1_555 B SG CYS 568 C CYS 568 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc7 I ZN ZN . A ZN 807 1_555 B SG CYS 571 C CYS 571 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc8 B NE2 HIS 268 C HIS 268 1_555 K FE HEB . C HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? 
metalc ? metalc9 B NE2 HIS 356 C HIS 356 1_555 K FE HEB . C HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc10 B NE2 HIS 369 C HIS 369 1_555 J FE HEB . C HEB 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 478 n n 
PA O2A NDP sing 479 n n 
PA O5B NDP sing 480 n n 
PA O3 NDP sing 481 n n 
O2A HOA2 NDP sing 482 n n 
O5B C5B NDP sing 483 n n 
C5B C4B NDP sing 484 n n 
C5B H51A NDP sing 485 n n 
C5B H52A NDP sing 486 n n 
C4B O4B NDP sing 487 n n 
C4B C3B NDP sing 488 n n 
C4B H4B NDP sing 489 n n 
O4B C1B NDP sing 490 n n 
C3B O3B NDP sing 491 n n 
C3B C2B NDP sing 492 n n 
C3B H3B NDP sing 493 n n 
O3B HO3A NDP sing 494 n n 
C2B O2B NDP sing 495 n n 
C2B C1B NDP sing 496 n n 
C2B H2B NDP sing 497 n n 
O2B P2B NDP sing 498 n n 
C1B N9A NDP sing 499 n n 
C1B H1B NDP sing 500 n n 
N9A C8A NDP sing 501 n y 
N9A C4A NDP sing 502 n y 
C8A N7A NDP doub 503 n y 
C8A H8A NDP sing 504 n n 
N7A C5A NDP sing 505 n y 
C5A C6A NDP sing 506 n y 
C5A C4A NDP doub 507 n y 
C6A N6A NDP sing 508 n n 
C6A N1A NDP doub 509 n y 
N6A H61A NDP sing 510 n n 
N6A H62A NDP sing 511 n n 
N1A C2A NDP sing 512 n y 
C2A N3A NDP doub 513 n y 
C2A H2A NDP sing 514 n n 
N3A C4A NDP sing 515 n y 
O3 PN NDP sing 516 n n 
PN O1N NDP doub 517 n n 
PN O2N NDP sing 518 n n 
PN O5D NDP sing 519 n n 
O2N H21N NDP sing 520 n n 
O5D C5D NDP sing 521 n n 
C5D C4D NDP sing 522 n n 
C5D H51N NDP sing 523 n n 
C5D H52N NDP sing 524 n n 
C4D O4D NDP sing 525 n n 
C4D C3D NDP sing 526 n n 
C4D H4D NDP sing 527 n n 
O4D C1D NDP sing 528 n n 
C3D O3D NDP sing 529 n n 
C3D C2D NDP sing 530 n n 
C3D H3D NDP sing 531 n n 
O3D HO3N NDP sing 532 n n 
C2D O2D NDP sing 533 n n 
C2D C1D NDP sing 534 n n 
C2D H2D NDP sing 535 n n 
O2D HO2N NDP sing 536 n n 
C1D N1N NDP sing 537 n n 
C1D H1D NDP sing 538 n n 
N1N C2N NDP sing 539 n n 
N1N C6N NDP sing 540 n n 
C2N C3N NDP doub 541 n n 
C2N H2N NDP sing 542 n n 
C3N C7N NDP sing 543 n n 
C3N C4N NDP sing 544 n n 
C7N O7N NDP doub 545 n n 
C7N N7N NDP sing 546 n n 
N7N H71N NDP sing 547 n n 
N7N H72N NDP sing 548 n n 
C4N C5N NDP sing 549 n n 
C4N H41N NDP sing 550 n n 
C4N H42N NDP sing 551 n n 
C5N C6N NDP doub 552 n n 
C5N H5N NDP sing 553 n n 
C6N H6N NDP sing 554 n n 
P2B O1X NDP doub 555 n n 
P2B O2X NDP sing 556 n n 
P2B O3X NDP sing 557 n n 
O2X HOP2 NDP sing 558 n n 
O3X HOP3 NDP sing 559 n n 
#
_atom_sites.entry_id                     8U86 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEB A 1 801 801 HEB HEB . 
D 2 HEB A 1 802 851 HEB HEB . 
E 3 NDP A 1 803 901 NDP NDP . 
F 4 FAD A 1 804 951 FAD FAD . 
G 5 D12 A 1 805 1001 D12 D12 . 
H 6 D10 A 1 806 1101 D10 D10 . 
I 7 ZN A 1 807 1 ZN ZN . 
J 2 HEB C 1 801 801 HEB HEB . 
K 2 HEB C 1 802 851 HEB HEB . 
L 3 NDP C 1 803 901 NDP NDP . 
M 4 FAD C 1 804 951 FAD FAD . 
N 5 D12 C 1 805 1001 D12 D12 . 
O 6 D10 C 1 806 1101 D10 D10 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . L 3 163.383 133.802 150.313 1 51.9 ? PA NDP 803 C 1 
HETATM 2 O O1A NDP . . . L 3 164.202 132.573 150.128 1 51.9 ? O1A NDP 803 C 1 
HETATM 3 O O2A NDP . . . L 3 161.904 133.735 150.553 1 51.9 ? O2A NDP 803 C 1 
HETATM 4 O O5B NDP . . . L 3 164.074 134.749 151.448 1 51.9 ? O5B NDP 803 C 1 
HETATM 5 C C5B NDP . . . L 3 163.203 134.674 152.514 1 51.9 ? C5B NDP 803 C 1 
HETATM 6 C C4B NDP . . . L 3 164.013 134.435 153.74 1 51.9 ? C4B NDP 803 C 1 
HETATM 7 O O4B NDP . . . L 3 164.325 133.065 153.816 1 51.9 ? O4B NDP 803 C 1 
HETATM 8 C C3B NDP . . . L 3 165.295 135.256 153.571 1 51.9 ? C3B NDP 803 C 1 
HETATM 9 O O3B NDP . . . L 3 165.48 136.066 154.673 1 51.9 ? O3B NDP 803 C 1 
HETATM 10 C C2B NDP . . . L 3 166.396 134.184 153.565 1 51.9 ? C2B NDP 803 C 1 
HETATM 11 O O2B NDP . . . L 3 167.467 134.522 154.267 1 51.9 ? O2B NDP 803 C 1 
HETATM 12 C C1B NDP . . . L 3 165.655 132.989 154.254 1 51.9 ? C1B NDP 803 C 1 
HETATM 13 N N9A NDP . . . L 3 166.196 131.708 153.797 1 51.9 ? N9A NDP 803 C 1 
HETATM 14 C C8A NDP . . . L 3 166.622 131.364 152.508 1 51.9 ? C8A NDP 803 C 1 
HETATM 15 N N7A NDP . . . L 3 167.075 130.1 152.415 1 51.9 ? N7A NDP 803 C 1 
HETATM 16 C C5A NDP . . . L 3 166.934 129.601 153.718 1 51.9 ? C5A NDP 803 C 1 
HETATM 17 C C6A NDP . . . L 3 167.229 128.35 154.281 1 51.9 ? C6A NDP 803 C 1 
HETATM 18 N N6A NDP . . . L 3 167.755 127.345 153.501 1 51.9 ? N6A NDP 803 C 1 
HETATM 19 N N1A NDP . . . L 3 167.002 128.089 155.599 1 51.9 ? N1A NDP 803 C 1 
HETATM 20 C C2A NDP . . . L 3 166.476 129.139 156.304 1 51.9 ? C2A NDP 803 C 1 
HETATM 21 N N3A NDP . . . L 3 166.145 130.379 155.917 1 51.9 ? N3A NDP 803 C 1 
HETATM 22 C C4A NDP . . . L 3 166.387 130.591 154.588 1 51.9 ? C4A NDP 803 C 1 
HETATM 23 O O3 NDP . . . L 3 163.579 134.512 148.861 1 51.9 ? O3 NDP 803 C 1 
HETATM 24 P PN NDP . . . L 3 163.449 136.069 149.09 1 51.9 ? PN NDP 803 C 1 
HETATM 25 O O1N NDP . . . L 3 164.792 136.604 149.389 1 51.9 ? O1N NDP 803 C 1 
HETATM 26 O O2N NDP . . . L 3 162.198 136.47 149.841 1 51.9 ? O2N NDP 803 C 1 
HETATM 27 O O5D NDP . . . L 3 163.135 136.809 147.536 1 51.9 ? O5D NDP 803 C 1 
HETATM 28 C C5D NDP . . . L 3 161.791 136.649 147.342 1 51.9 ? C5D NDP 803 C 1 
HETATM 29 C C4D NDP . . . L 3 161.581 135.482 146.414 1 51.9 ? C4D NDP 803 C 1 
HETATM 30 O O4D NDP . . . L 3 160.254 134.998 146.531 1 51.9 ? O4D NDP 803 C 1 
HETATM 31 C C3D NDP . . . L 3 161.687 136.001 144.958 1 51.9 ? C3D NDP 803 C 1 
HETATM 32 O O3D NDP . . . L 3 162.906 135.592 144.442 1 51.9 ? O3D NDP 803 C 1 
HETATM 33 C C2D NDP . . . L 3 160.519 135.292 144.25 1 51.9 ? C2D NDP 803 C 1 
HETATM 34 O O2D NDP . . . L 3 160.931 134.552 143.152 1 51.9 ? O2D NDP 803 C 1 
HETATM 35 C C1D NDP . . . L 3 160.045 134.302 145.342 1 51.9 ? C1D NDP 803 C 1 
HETATM 36 N N1N NDP . . . L 3 158.616 134.026 145.188 1 51.9 ? N1N NDP 803 C 1 
HETATM 37 C C2N NDP . . . L 3 158.165 133.427 144.038 1 51.9 ? C2N NDP 803 C 1 
HETATM 38 C C3N NDP . . . L 3 156.953 132.82 144.019 1 51.9 ? C3N NDP 803 C 1 
HETATM 39 C C7N NDP . . . L 3 156.559 132.211 142.761 1 51.9 ? C7N NDP 803 C 1 
HETATM 40 O O7N NDP . . . L 3 157.29 132.113 141.768 1 51.9 ? O7N NDP 803 C 1 
HETATM 41 N N7N NDP . . . L 3 155.274 131.708 142.69 1 51.9 ? N7N NDP 803 C 1 
HETATM 42 C C4N NDP . . . L 3 156.078 132.772 145.22 1 51.9 ? C4N NDP 803 C 1 
HETATM 43 C C5N NDP . . . L 3 156.495 133.772 146.238 1 51.9 ? C5N NDP 803 C 1 
HETATM 44 C C6N NDP . . . L 3 157.7 134.351 146.202 1 51.9 ? C6N NDP 803 C 1 
HETATM 45 P P2B NDP . . . L 3 168.83 135.005 153.159 1 51.9 ? P2B NDP 803 C 1 
HETATM 46 O O1X NDP . . . L 3 169.679 135.655 154.205 1 51.9 ? O1X NDP 803 C 1 
HETATM 47 O O2X NDP . . . L 3 169.313 133.672 152.581 1 51.9 ? O2X NDP 803 C 1 
HETATM 48 O O3X NDP . . . L 3 168.038 135.902 152.252 1 51.9 ? O3X NDP 803 C 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           332 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           48 
#