data_8U86
#
_model_server_result.job_id            ggf4ZRYONmdcXrDYr5QPiA 
_model_server_result.datetime_utc      '2024-11-05 00:04:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8u86 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":805}' 
#
_entry.id    8U86 
#
_exptl.entry_id    8U86 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              170.335 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECANE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8U86 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8U86 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 268 A HIS 268 1_555 D FE HEB . A HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? 
metalc ? metalc2 A NE2 HIS 356 A HIS 356 1_555 D FE HEB . A HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? 
metalc ? metalc3 A NE2 HIS 369 A HIS 369 1_555 C FE HEB . A HEB 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? 
metalc ? metalc4 A SG CYS 568 A CYS 568 1_555 I ZN ZN . A ZN 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc5 A SG CYS 571 A CYS 571 1_555 I ZN ZN . A ZN 807 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc6 I ZN ZN . A ZN 807 1_555 B SG CYS 568 C CYS 568 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc7 I ZN ZN . A ZN 807 1_555 B SG CYS 571 C CYS 571 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc8 B NE2 HIS 268 C HIS 268 1_555 K FE HEB . C HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? 
metalc ? metalc9 B NE2 HIS 356 C HIS 356 1_555 K FE HEB . C HEB 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc10 B NE2 HIS 369 C HIS 369 1_555 J FE HEB . C HEB 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? 
#
_chem_comp.formula           'C12 H26' 
_chem_comp.formula_weight    170.335 
_chem_comp.id                D12 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECANE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 D12 sing 114 n n 
C1 H11 D12 sing 115 n n 
C1 H12 D12 sing 116 n n 
C1 H13 D12 sing 117 n n 
C2 C3 D12 sing 118 n n 
C2 H21 D12 sing 119 n n 
C2 H22 D12 sing 120 n n 
C3 C4 D12 sing 121 n n 
C3 H31 D12 sing 122 n n 
C3 H32 D12 sing 123 n n 
C4 C5 D12 sing 124 n n 
C4 H41 D12 sing 125 n n 
C4 H42 D12 sing 126 n n 
C5 C6 D12 sing 127 n n 
C5 H51 D12 sing 128 n n 
C5 H52 D12 sing 129 n n 
C6 C7 D12 sing 130 n n 
C6 H61 D12 sing 131 n n 
C6 H62 D12 sing 132 n n 
C7 C8 D12 sing 133 n n 
C7 H71 D12 sing 134 n n 
C7 H72 D12 sing 135 n n 
C8 C9 D12 sing 136 n n 
C8 H81 D12 sing 137 n n 
C8 H82 D12 sing 138 n n 
C9 C10 D12 sing 139 n n 
C9 H91 D12 sing 140 n n 
C9 H92 D12 sing 141 n n 
C10 C11 D12 sing 142 n n 
C10 H101 D12 sing 143 n n 
C10 H102 D12 sing 144 n n 
C11 C12 D12 sing 145 n n 
C11 H111 D12 sing 146 n n 
C11 H112 D12 sing 147 n n 
C12 H121 D12 sing 148 n n 
C12 H122 D12 sing 149 n n 
C12 H123 D12 sing 150 n n 
#
_atom_sites.entry_id                     8U86 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEB A 1 801 801 HEB HEB . 
D 2 HEB A 1 802 851 HEB HEB . 
E 3 NDP A 1 803 901 NDP NDP . 
F 4 FAD A 1 804 951 FAD FAD . 
G 5 D12 A 1 805 1001 D12 D12 . 
H 6 D10 A 1 806 1101 D10 D10 . 
I 7 ZN A 1 807 1 ZN ZN . 
J 2 HEB C 1 801 801 HEB HEB . 
K 2 HEB C 1 802 851 HEB HEB . 
L 3 NDP C 1 803 901 NDP NDP . 
M 4 FAD C 1 804 951 FAD FAD . 
N 5 D12 C 1 805 1001 D12 D12 . 
O 6 D10 C 1 806 1101 D10 D10 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 D12 . . . G 5 106.003 125.139 134.279 1 11.87 ? C1 D12 805 A 1 
HETATM 2 C C2 D12 . . . G 5 106.532 126.54 134.485 1 11.87 ? C2 D12 805 A 1 
HETATM 3 C C3 D12 . . . G 5 108.049 126.569 134.38 1 11.87 ? C3 D12 805 A 1 
HETATM 4 C C4 D12 . . . G 5 108.57 127.982 134.585 1 11.87 ? C4 D12 805 A 1 
HETATM 5 C C5 D12 . . . G 5 110.087 128.026 134.508 1 11.87 ? C5 D12 805 A 1 
HETATM 6 C C6 D12 . . . G 5 110.596 129.386 134.95 1 11.87 ? C6 D12 805 A 1 
HETATM 7 C C7 D12 . . . G 5 111.981 129.664 134.389 1 11.87 ? C7 D12 805 A 1 
HETATM 8 C C8 D12 . . . G 5 113.051 128.797 135.033 1 11.87 ? C8 D12 805 A 1 
HETATM 9 C C9 D12 . . . G 5 114.421 129.351 134.667 1 11.87 ? C9 D12 805 A 1 
HETATM 10 C C10 D12 . . . G 5 115.553 128.469 135.169 1 11.87 ? C10 D12 805 A 1 
HETATM 11 C C11 D12 . . . G 5 116.876 128.974 134.61 1 11.87 ? C11 D12 805 A 1 
HETATM 12 C C12 D12 . . . G 5 118.023 128.081 135.019 1 11.87 ? C12 D12 805 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           12 
#