data_8U8A
#
_model_server_result.job_id            9zYZcVQJONa8MRgbJZt4aA 
_model_server_result.datetime_utc      '2024-11-28 15:37:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8u8a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":2601}' 
#
_entry.id    8U8A 
#
_exptl.entry_id    8U8A 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              532.559 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8U8A 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8U8A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C29 H27 F3 N6 O' 
_chem_comp.formula_weight    532.559 
_chem_comp.id                0LI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '3-(imidazo[1,2-b]pyridazin-3-ylethynyl)-4-methyl-N-{4-[(4-methylpiperazin-1-yl)methyl]-3-(trifluoromethyl)phenyl}benzam ide' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Ponatinib 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C84 0LI doub 1 n y 
N1 C1 0LI sing 2 n y 
N3 C20 0LI sing 3 n n 
N3 C21 0LI sing 4 n n 
N3 C24 0LI sing 5 n n 
C4 C5 0LI sing 6 n n 
C4 C3 0LI trip 7 n n 
C5 C6 0LI doub 8 n y 
C5 C10 0LI sing 9 n y 
C6 C7 0LI sing 10 n y 
C6 C11 0LI sing 11 n n 
C7 C8 0LI doub 12 n y 
C7 H7 0LI sing 13 n n 
C8 C9 0LI sing 14 n y 
C8 H8 0LI sing 15 n n 
C10 C9 0LI doub 16 n y 
C10 H10 0LI sing 17 n n 
C13 N2 0LI sing 18 n n 
C13 C14 0LI doub 19 n y 
C13 C18 0LI sing 20 n y 
C15 C14 0LI sing 21 n y 
C15 C16 0LI doub 22 n y 
C15 H15 0LI sing 23 n n 
C17 C16 0LI sing 24 n y 
C17 C18 0LI doub 25 n y 
C17 C19 0LI sing 26 n n 
C20 C16 0LI sing 27 n n 
C20 H20 0LI sing 28 n n 
C20 H20A 0LI sing 29 n n 
C21 C22 0LI sing 30 n n 
C21 H21 0LI sing 31 n n 
C21 H21A 0LI sing 32 n n 
C22 N4 0LI sing 33 n n 
C22 H22 0LI sing 34 n n 
C22 H22A 0LI sing 35 n n 
C24 C23 0LI sing 36 n n 
C24 H24 0LI sing 37 n n 
C24 H24A 0LI sing 38 n n 
C81 C82 0LI doub 39 n y 
C81 C84 0LI sing 40 n y 
C81 H81 0LI sing 41 n n 
C82 C83 0LI sing 42 n y 
C82 H82 0LI sing 43 n n 
C83 N81 0LI doub 44 n y 
C83 H83 0LI sing 45 n n 
N81 N82 0LI sing 46 n y 
N82 C84 0LI sing 47 n y 
N82 C2 0LI sing 48 n y 
C1 C2 0LI doub 49 n y 
C1 H1 0LI sing 50 n n 
C2 C3 0LI sing 51 n n 
C9 C12 0LI sing 52 n n 
C11 H11 0LI sing 53 n n 
C11 H11A 0LI sing 54 n n 
C11 H11B 0LI sing 55 n n 
C12 O1 0LI doub 56 n n 
C12 N2 0LI sing 57 n n 
N2 HN2 0LI sing 58 n n 
C14 H14 0LI sing 59 n n 
C18 H18 0LI sing 60 n n 
C19 F1 0LI sing 61 n n 
C19 F2 0LI sing 62 n n 
C19 F3 0LI sing 63 n n 
C23 N4 0LI sing 64 n n 
C23 H23 0LI sing 65 n n 
C23 H23A 0LI sing 66 n n 
C25 N4 0LI sing 67 n n 
C25 H25 0LI sing 68 n n 
C25 H25A 0LI sing 69 n n 
C25 H25B 0LI sing 70 n n 
#
_atom_sites.entry_id                     8U8A 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 0LI B 1 2601 2602 0LI 0LI . 
D 3 GDP B 1 2602 2601 GDP GDP . 
E 2 0LI C 1 2601 2603 0LI 0LI . 
F 3 GDP C 1 2602 2602 GDP GDP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 0LI . . . E 2 210.792 246.233 238.633 1 49.5 ? N1 0LI 2601 C 1 
HETATM 2 N N3 0LI . . . E 2 217.16 254.085 226.005 1 56.94 ? N3 0LI 2601 C 1 
HETATM 3 C C4 0LI . . . E 2 212.394 246.457 234.181 1 56.24 ? C4 0LI 2601 C 1 
HETATM 4 C C5 0LI . . . E 2 213.064 246.345 232.897 1 51.11 ? C5 0LI 2601 C 1 
HETATM 5 C C6 0LI . . . E 2 213.259 245.077 232.214 1 47.64 ? C6 0LI 2601 C 1 
HETATM 6 C C7 0LI . . . E 2 213.919 245.079 230.943 1 50.9 ? C7 0LI 2601 C 1 
HETATM 7 C C8 0LI . . . E 2 214.364 246.299 230.357 1 49.28 ? C8 0LI 2601 C 1 
HETATM 8 C C10 0LI . . . E 2 213.512 247.54 232.308 1 50.25 ? C10 0LI 2601 C 1 
HETATM 9 C C13 0LI . . . E 2 216.2 250.096 229.155 1 50.1 ? C13 0LI 2601 C 1 
HETATM 10 C C15 0LI . . . E 2 217.024 251.282 227.156 1 51.62 ? C15 0LI 2601 C 1 
HETATM 11 C C17 0LI . . . E 2 217.067 252.437 229.362 1 52.47 ? C17 0LI 2601 C 1 
HETATM 12 C C20 0LI . . . E 2 217.936 253.672 227.177 1 52.24 ? C20 0LI 2601 C 1 
HETATM 13 C C21 0LI . . . E 2 216.049 255.005 226.36 1 54.1 ? C21 0LI 2601 C 1 
HETATM 14 C C22 0LI . . . E 2 215.145 255.241 225.134 1 51.82 ? C22 0LI 2601 C 1 
HETATM 15 C C24 0LI . . . E 2 217.985 254.736 224.973 1 55.44 ? C24 0LI 2601 C 1 
HETATM 16 C C81 0LI . . . E 2 208.301 246.532 238.543 1 50.38 ? C81 0LI 2601 C 1 
HETATM 17 C C82 0LI . . . E 2 207.285 246.748 237.642 1 51.38 ? C82 0LI 2601 C 1 
HETATM 18 C C83 0LI . . . E 2 207.602 246.856 236.265 1 51.39 ? C83 0LI 2601 C 1 
HETATM 19 N N81 0LI . . . E 2 208.814 246.769 235.726 1 50.66 ? N81 0LI 2601 C 1 
HETATM 20 N N82 0LI . . . E 2 209.777 246.555 236.666 1 41.91 ? N82 0LI 2601 C 1 
HETATM 21 C C84 0LI . . . E 2 209.632 246.431 238.056 1 47.11 ? C84 0LI 2601 C 1 
HETATM 22 C C1 0LI . . . E 2 211.716 246.235 237.618 1 42.82 ? C1 0LI 2601 C 1 
HETATM 23 C C2 0LI . . . E 2 211.105 246.449 236.442 1 42.09 ? C2 0LI 2601 C 1 
HETATM 24 C C3 0LI . . . E 2 211.745 246.474 235.206 1 52.74 ? C3 0LI 2601 C 1 
HETATM 25 C C9 0LI . . . E 2 214.149 247.544 231.05 1 48.97 ? C9 0LI 2601 C 1 
HETATM 26 C C11 0LI . . . E 2 212.798 243.754 232.816 1 47.2 ? C11 0LI 2601 C 1 
HETATM 27 C C12 0LI . . . E 2 214.579 248.88 230.549 1 50.45 ? C12 0LI 2601 C 1 
HETATM 28 O O1 0LI . . . E 2 213.969 249.878 230.931 1 55.28 ? O1 0LI 2601 C 1 
HETATM 29 N N2 0LI . . . E 2 215.637 248.928 229.727 1 48.5 ? N2 0LI 2601 C 1 
HETATM 30 C C14 0LI . . . E 2 216.462 250.116 227.766 1 50.5 ? C14 0LI 2601 C 1 
HETATM 31 C C16 0LI . . . E 2 217.335 252.464 227.927 1 50.77 ? C16 0LI 2601 C 1 
HETATM 32 C C18 0LI . . . E 2 216.512 251.261 229.927 1 51.45 ? C18 0LI 2601 C 1 
HETATM 33 C C19 0LI . . . E 2 217.325 253.592 230.334 1 57.17 ? C19 0LI 2601 C 1 
HETATM 34 F F1 0LI . . . E 2 218.579 253.965 230.269 1 60.14 ? F1 0LI 2601 C 1 
HETATM 35 F F2 0LI . . . E 2 216.588 254.656 230.062 1 58.03 ? F2 0LI 2601 C 1 
HETATM 36 F F3 0LI . . . E 2 217.035 253.219 231.576 1 57.98 ? F3 0LI 2601 C 1 
HETATM 37 C C23 0LI . . . E 2 217.131 255.081 223.715 1 52.69 ? C23 0LI 2601 C 1 
HETATM 38 C C25 0LI . . . E 2 215.083 256.164 222.909 1 54.25 ? C25 0LI 2601 C 1 
HETATM 39 N N4 0LI . . . E 2 215.922 255.884 224.062 1 54.47 ? N4 0LI 2601 C 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    46 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           39 
#