data_8U9G # _model_server_result.job_id sJTQrtasPJytBcGyG7BMcg _model_server_result.datetime_utc '2024-11-08 06:47:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8u9g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 8U9G # _exptl.entry_id 8U9G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.01 _cell.angle_gamma 90 _cell.entry_id 8U9G _cell.length_a 58.196 _cell.length_b 85.432 _cell.length_c 84.075 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8U9G _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,G,J,K 1 1 C,D,F,H,I,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf4 C SG CYS 101 D CYS 101 1_555 C SG CYS 164 D CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf5 C SG CYS 203 D CYS 203 1_555 C SG CYS 259 D CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf6 D SG CYS 26 E CYS 25 1_555 D SG CYS 81 E CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? covale ? covale1 C CB ALA 139 D ALA 139 1_555 H O3S MES . D MES 301 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 231 n n O1 C6 MES sing 232 n n C2 C3 MES sing 233 n n C2 H21 MES sing 234 n n C2 H22 MES sing 235 n n C3 N4 MES sing 236 n n C3 H31 MES sing 237 n n C3 H32 MES sing 238 n n N4 C5 MES sing 239 n n N4 C7 MES sing 240 n n N4 HN4 MES sing 241 n n C5 C6 MES sing 242 n n C5 H51 MES sing 243 n n C5 H52 MES sing 244 n n C6 H61 MES sing 245 n n C6 H62 MES sing 246 n n C7 C8 MES sing 247 n n C7 H71 MES sing 248 n n C7 H72 MES sing 249 n n C8 S MES sing 250 n n C8 H81 MES sing 251 n n C8 H82 MES sing 252 n n S O1S MES doub 253 n n S O2S MES doub 254 n n S O3S MES sing 255 n n # _atom_sites.entry_id 8U9G _atom_sites.fract_transf_matrix[1][1] 0.017183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000003 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011705 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011894 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 PEG A 1 301 301 PEG PEG . H 5 MES D 1 301 301 MES MES . I 6 GOL E 1 101 101 GOL GOL . J 7 HOH A 1 401 17 HOH HOH . J 7 HOH A 2 402 44 HOH HOH . J 7 HOH A 3 403 32 HOH HOH . J 7 HOH A 4 404 36 HOH HOH . J 7 HOH A 5 405 34 HOH HOH . J 7 HOH A 6 406 24 HOH HOH . J 7 HOH A 7 407 46 HOH HOH . J 7 HOH A 8 408 29 HOH HOH . J 7 HOH A 9 409 4 HOH HOH . J 7 HOH A 10 410 37 HOH HOH . J 7 HOH A 11 411 12 HOH HOH . J 7 HOH A 12 412 7 HOH HOH . J 7 HOH A 13 413 9 HOH HOH . J 7 HOH A 14 414 15 HOH HOH . J 7 HOH A 15 415 6 HOH HOH . J 7 HOH A 16 416 45 HOH HOH . J 7 HOH A 17 417 38 HOH HOH . J 7 HOH A 18 418 22 HOH HOH . J 7 HOH A 19 419 20 HOH HOH . K 7 HOH B 1 101 39 HOH HOH . K 7 HOH B 2 102 1 HOH HOH . K 7 HOH B 3 103 50 HOH HOH . K 7 HOH B 4 104 5 HOH HOH . K 7 HOH B 5 105 49 HOH HOH . K 7 HOH B 6 106 13 HOH HOH . K 7 HOH B 7 107 3 HOH HOH . K 7 HOH B 8 108 51 HOH HOH . K 7 HOH B 9 109 52 HOH HOH . K 7 HOH B 10 110 53 HOH HOH . L 7 HOH D 1 401 10 HOH HOH . L 7 HOH D 2 402 8 HOH HOH . L 7 HOH D 3 403 27 HOH HOH . L 7 HOH D 4 404 48 HOH HOH . L 7 HOH D 5 405 23 HOH HOH . L 7 HOH D 6 406 42 HOH HOH . L 7 HOH D 7 407 30 HOH HOH . L 7 HOH D 8 408 11 HOH HOH . L 7 HOH D 9 409 21 HOH HOH . L 7 HOH D 10 410 35 HOH HOH . L 7 HOH D 11 411 26 HOH HOH . L 7 HOH D 12 412 43 HOH HOH . L 7 HOH D 13 413 18 HOH HOH . M 7 HOH E 1 201 40 HOH HOH . M 7 HOH E 2 202 28 HOH HOH . M 7 HOH E 3 203 33 HOH HOH . M 7 HOH E 4 204 31 HOH HOH . M 7 HOH E 5 205 41 HOH HOH . M 7 HOH E 6 206 14 HOH HOH . M 7 HOH E 7 207 25 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . H 5 48.771 -47.527 13.518 1 57 ? O1 MES 301 D 1 HETATM 2 C C2 MES . . . H 5 49.416 -46.618 12.619 1 68.89 ? C2 MES 301 D 1 HETATM 3 C C3 MES . . . H 5 49.669 -45.208 13.166 1 60.56 ? C3 MES 301 D 1 HETATM 4 N N4 MES . . . H 5 48.907 -44.969 14.395 1 52.24 ? N4 MES 301 D 1 HETATM 5 C C5 MES . . . H 5 48.349 -46.034 15.21 1 53.48 ? C5 MES 301 D 1 HETATM 6 C C6 MES . . . H 5 47.688 -46.921 14.194 1 48.46 ? C6 MES 301 D 1 HETATM 7 C C7 MES . . . H 5 49.139 -43.702 15.076 1 56.8 ? C7 MES 301 D 1 HETATM 8 C C8 MES . . . H 5 49.681 -44.071 16.444 1 78.4 ? C8 MES 301 D 1 HETATM 9 S S MES . . . H 5 48.893 -43.337 17.716 1 100.83 ? S MES 301 D 1 HETATM 10 O O1S MES . . . H 5 47.887 -44.279 18.259 1 115.87 ? O1S MES 301 D 1 HETATM 11 O O2S MES . . . H 5 48.257 -42.07 17.286 1 81.2 ? O2S MES 301 D 1 HETATM 12 O O3S MES . . . H 5 49.917 -43.098 18.745 1 166.06 ? O3S MES 301 D 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 12 #