data_8UAF
#
_model_server_result.job_id            -Eqy5XzlFWFjehtWuxwEZQ 
_model_server_result.datetime_utc      '2024-10-11 01:19:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8uaf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":501}' 
#
_entry.id    8UAF 
#
_exptl.entry_id    8UAF 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8UAF 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8UAF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octadecameric 
_pdbx_struct_assembly.oligomeric_count      18 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 T N N 
? 4 U N N 
? 4 W N N 
? 4 X N N 
? 4 Y N N 
? 4 Z N N 
? 4 BA N N 
? 4 DA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 M OG SER 184 M SER 184 1_555 FA MG MG . M MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? 
metalc ? metalc2 M OE1 GLU 211 M GLU 211 1_555 FA MG MG . M MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? 
metalc ? metalc3 N OE2 GLU 477 N GLU 477 1_555 HA MG MG . N MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc4 O OE2 GLU 477 O GLU 477 1_555 JA MG MG . O MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.959 ? 
metalc ? metalc5 P OG SER 184 P SER 184 1_555 KA MG MG . P MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.721 ? 
metalc ? metalc6 P OE2 GLU 477 P GLU 477 1_555 KA MG MG . P MG 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? 
metalc ? metalc7 KA MG MG . P MG 701 1_555 LA O1B ADP . P ADP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? 
metalc ? metalc8 Q OG SER 184 Q SER 184 1_555 NA MG MG . Q MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 341 n n 
PA O2A NAD sing 342 n n 
PA O5B NAD sing 343 n n 
PA O3 NAD sing 344 n n 
O2A HOA2 NAD sing 345 n n 
O5B C5B NAD sing 346 n n 
C5B C4B NAD sing 347 n n 
C5B H51A NAD sing 348 n n 
C5B H52A NAD sing 349 n n 
C4B O4B NAD sing 350 n n 
C4B C3B NAD sing 351 n n 
C4B H4B NAD sing 352 n n 
O4B C1B NAD sing 353 n n 
C3B O3B NAD sing 354 n n 
C3B C2B NAD sing 355 n n 
C3B H3B NAD sing 356 n n 
O3B HO3A NAD sing 357 n n 
C2B O2B NAD sing 358 n n 
C2B C1B NAD sing 359 n n 
C2B H2B NAD sing 360 n n 
O2B HO2A NAD sing 361 n n 
C1B N9A NAD sing 362 n n 
C1B H1B NAD sing 363 n n 
N9A C8A NAD sing 364 n y 
N9A C4A NAD sing 365 n y 
C8A N7A NAD doub 366 n y 
C8A H8A NAD sing 367 n n 
N7A C5A NAD sing 368 n y 
C5A C6A NAD sing 369 n y 
C5A C4A NAD doub 370 n y 
C6A N6A NAD sing 371 n n 
C6A N1A NAD doub 372 n y 
N6A H61A NAD sing 373 n n 
N6A H62A NAD sing 374 n n 
N1A C2A NAD sing 375 n y 
C2A N3A NAD doub 376 n y 
C2A H2A NAD sing 377 n n 
N3A C4A NAD sing 378 n y 
O3 PN NAD sing 379 n n 
PN O1N NAD doub 380 n n 
PN O2N NAD sing 381 n n 
PN O5D NAD sing 382 n n 
O5D C5D NAD sing 383 n n 
C5D C4D NAD sing 384 n n 
C5D H51N NAD sing 385 n n 
C5D H52N NAD sing 386 n n 
C4D O4D NAD sing 387 n n 
C4D C3D NAD sing 388 n n 
C4D H4D NAD sing 389 n n 
O4D C1D NAD sing 390 n n 
C3D O3D NAD sing 391 n n 
C3D C2D NAD sing 392 n n 
C3D H3D NAD sing 393 n n 
O3D HO3N NAD sing 394 n n 
C2D O2D NAD sing 395 n n 
C2D C1D NAD sing 396 n n 
C2D H2D NAD sing 397 n n 
O2D HO2N NAD sing 398 n n 
C1D N1N NAD sing 399 n n 
C1D H1D NAD sing 400 n n 
N1N C2N NAD sing 401 n y 
N1N C6N NAD doub 402 n y 
C2N C3N NAD doub 403 n y 
C2N H2N NAD sing 404 n n 
C3N C7N NAD sing 405 n n 
C3N C4N NAD sing 406 n y 
C7N O7N NAD doub 407 n n 
C7N N7N NAD sing 408 n n 
N7N H71N NAD sing 409 n n 
N7N H72N NAD sing 410 n n 
C4N C5N NAD doub 411 n y 
C4N H4N NAD sing 412 n n 
C5N C6N NAD sing 413 n y 
C5N H5N NAD sing 414 n n 
C6N H6N NAD sing 415 n n 
#
_atom_sites.entry_id                     8UAF 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
S 3 AR6 A 1 501 501 AR6 AR6 . 
T 4 NAD B 1 501 401 NAD LIG . 
U 4 NAD C 1 501 501 NAD LIG . 
V 3 AR6 D 1 501 401 AR6 AR6 . 
W 4 NAD E 1 501 501 NAD LIG . 
X 4 NAD F 1 501 401 NAD LIG . 
Y 4 NAD G 1 501 501 NAD LIG . 
Z 4 NAD H 1 501 401 NAD LIG . 
AA 3 AR6 I 1 501 501 AR6 AR6 . 
BA 4 NAD J 1 501 401 NAD LIG . 
CA 3 AR6 K 1 501 501 AR6 AR6 . 
DA 4 NAD L 1 501 401 NAD LIG . 
EA 5 ADP M 1 701 701 ADP ADP . 
FA 6 MG M 1 702 703 MG MG . 
GA 5 ADP N 1 701 701 ADP ADP . 
HA 6 MG N 1 702 704 MG MG . 
IA 5 ADP O 1 701 701 ADP ADP . 
JA 6 MG O 1 702 705 MG MG . 
KA 6 MG P 1 701 702 MG MG . 
LA 5 ADP P 1 702 701 ADP ADP . 
MA 5 ADP Q 1 701 701 ADP ADP . 
NA 6 MG Q 1 702 706 MG MG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . W 4 238.906 186.025 216.21 1 108.59 ? PA NAD 501 E 1 
HETATM 2 O O1A NAD . . . W 4 238.452 184.77 215.589 1 97.18 -1 O1A NAD 501 E 1 
HETATM 3 O O2A NAD . . . W 4 237.849 186.939 216.79 1 97.63 ? O2A NAD 501 E 1 
HETATM 4 O O5B NAD . . . W 4 239.571 186.995 214.94 1 95.41 ? O5B NAD 501 E 1 
HETATM 5 C C5B NAD . . . W 4 240.347 186.459 213.99 1 91.73 ? C5B NAD 501 E 1 
HETATM 6 C C4B NAD . . . W 4 241.368 187.48 213.531 1 94.36 ? C4B NAD 501 E 1 
HETATM 7 O O4B NAD . . . W 4 240.768 188.603 212.945 1 95.75 ? O4B NAD 501 E 1 
HETATM 8 C C3B NAD . . . W 4 242.126 188.036 214.771 1 95.26 ? C3B NAD 501 E 1 
HETATM 9 O O3B NAD . . . W 4 241.753 187.394 215.971 1 94.86 ? O3B NAD 501 E 1 
HETATM 10 C C2B NAD . . . W 4 241.62 189.503 214.756 1 97.31 ? C2B NAD 501 E 1 
HETATM 11 O O2B NAD . . . W 4 242.605 190.323 215.288 1 95.38 ? O2B NAD 501 E 1 
HETATM 12 C C1B NAD . . . W 4 241.437 189.753 213.241 1 95.21 ? C1B NAD 501 E 1 
HETATM 13 N N9A NAD . . . W 4 240.626 190.89 212.884 1 90.25 ? N9A NAD 501 E 1 
HETATM 14 C C8A NAD . . . W 4 240.776 192.192 213.362 1 86.62 ? C8A NAD 501 E 1 
HETATM 15 N N7A NAD . . . W 4 239.892 193.053 212.867 1 83.01 ? N7A NAD 501 E 1 
HETATM 16 C C5A NAD . . . W 4 239.08 192.333 212.003 1 89.23 ? C5A NAD 501 E 1 
HETATM 17 C C6A NAD . . . W 4 237.971 192.669 211.182 1 94.67 ? C6A NAD 501 E 1 
HETATM 18 N N6A NAD . . . W 4 237.427 193.968 211.088 1 94.73 ? N6A NAD 501 E 1 
HETATM 19 N N1A NAD . . . W 4 237.389 191.678 210.439 1 92.19 ? N1A NAD 501 E 1 
HETATM 20 C C2A NAD . . . W 4 237.929 190.408 210.532 1 85.14 ? C2A NAD 501 E 1 
HETATM 21 N N3A NAD . . . W 4 238.963 189.983 211.264 1 83.73 ? N3A NAD 501 E 1 
HETATM 22 C C4A NAD . . . W 4 239.524 190.981 211.998 1 87.27 ? C4A NAD 501 E 1 
HETATM 23 O O3 NAD . . . W 4 240.066 185.636 217.314 1 99.52 ? O3 NAD 501 E 1 
HETATM 24 P PN NAD . . . W 4 239.856 184.934 218.725 1 104.63 ? PN NAD 501 E 1 
HETATM 25 O O1N NAD . . . W 4 240.161 183.467 218.691 1 95.94 -1 O1N NAD 501 E 1 
HETATM 26 O O2N NAD . . . W 4 240.384 185.749 219.842 1 95.69 ? O2N NAD 501 E 1 
HETATM 27 O O5D NAD . . . W 4 238.07 184.765 219.121 1 97.9 ? O5D NAD 501 E 1 
HETATM 28 C C5D NAD . . . W 4 237.191 184.025 218.448 1 94.55 ? C5D NAD 501 E 1 
HETATM 29 C C4D NAD . . . W 4 236.963 182.663 219.203 1 96.25 ? C4D NAD 501 E 1 
HETATM 30 O O4D NAD . . . W 4 235.663 182.483 219.77 1 98.5 ? O4D NAD 501 E 1 
HETATM 31 C C3D NAD . . . W 4 237.079 181.552 218.148 1 96.83 ? C3D NAD 501 E 1 
HETATM 32 O O3D NAD . . . W 4 236.445 182.027 216.998 1 96.64 ? O3D NAD 501 E 1 
HETATM 33 C C2D NAD . . . W 4 236.234 180.425 218.811 1 95.15 ? C2D NAD 501 E 1 
HETATM 34 O O2D NAD . . . W 4 237.077 179.56 219.479 1 92.12 ? O2D NAD 501 E 1 
HETATM 35 C C1D NAD . . . W 4 235.305 181.151 219.858 1 96.4 ? C1D NAD 501 E 1 
HETATM 36 N N1N NAD . . . W 4 235.508 180.553 221.385 1 92.23 ? N1N NAD 501 E 1 
HETATM 37 C C2N NAD . . . W 4 234.788 179.485 221.864 1 89.8 ? C2N NAD 501 E 1 
HETATM 38 C C3N NAD . . . W 4 234.955 178.957 223.181 1 87.79 ? C3N NAD 501 E 1 
HETATM 39 C C7N NAD . . . W 4 234.114 177.749 223.69 1 90.07 ? C7N NAD 501 E 1 
HETATM 40 O O7N NAD . . . W 4 232.944 177.88 223.938 1 91.28 ? O7N NAD 501 E 1 
HETATM 41 N N7N NAD . . . W 4 234.717 176.478 223.866 1 91.91 ? N7N NAD 501 E 1 
HETATM 42 C C4N NAD . . . W 4 235.911 179.586 223.974 1 88.68 ? C4N NAD 501 E 1 
HETATM 43 C C5N NAD . . . W 4 236.655 180.683 223.496 1 85.51 ? C5N NAD 501 E 1 
HETATM 44 C C6N NAD . . . W 4 236.446 181.147 222.209 1 87.82 ? C6N NAD 501 E 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    86 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           44 
#