data_8UAP # _model_server_result.job_id zJBfWBZQu9b1oItLwZiiXQ _model_server_result.datetime_utc '2024-10-20 20:39:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uap # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 8UAP # _exptl.entry_id 8UAP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 494.945 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3Z)-3-{[4-(2-chloroacetamido)-3,5-dimethyl-1H-pyrrol-2-yl]methylidene}-N-[(1R)-1-(4-fluorophenyl)ethyl]-2-oxo-2,3-dihydro-1H-indole-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UAP _cell.length_a 137.855 _cell.length_b 137.855 _cell.length_c 71.089 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UAP _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 203 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 203 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 214 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 214 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.054 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C26 H24 Cl F N4 O3' _chem_comp.formula_weight 494.945 _chem_comp.id W2T _chem_comp.mon_nstd_flag . _chem_comp.name (3Z)-3-{[4-(2-chloroacetamido)-3,5-dimethyl-1H-pyrrol-2-yl]methylidene}-N-[(1R)-1-(4-fluorophenyl)ethyl]-2-oxo-2,3-dihydro-1H-indole-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL3 C32 W2T sing 376 n n C01 C02 W2T doub 377 n y C01 C06 W2T sing 378 n y C02 C03 W2T sing 379 n y C02 F34 W2T sing 380 n n C03 C04 W2T doub 381 n y C04 C05 W2T sing 382 n y C05 C06 W2T doub 383 n y C05 C07 W2T sing 384 n n C07 N08 W2T sing 385 n n C07 C12 W2T sing 386 n n N08 C09 W2T sing 387 n n C09 C10 W2T sing 388 n n C09 O11 W2T doub 389 n n C10 C13 W2T doub 390 n y C10 C17 W2T sing 391 n y C13 C14 W2T sing 392 n y C14 C15 W2T doub 393 n y C15 C16 W2T sing 394 n y C15 N18 W2T sing 395 n n C16 C17 W2T doub 396 n y C16 C20 W2T sing 397 n n N18 C19 W2T sing 398 n n C19 C20 W2T sing 399 n n C19 O21 W2T doub 400 n n C20 C22 W2T doub 401 z n C22 C23 W2T sing 402 n n C23 N24 W2T sing 403 n y C23 C27 W2T doub 404 n y N24 C25 W2T sing 405 n y C25 C26 W2T doub 406 n y C25 C29 W2T sing 407 n n C26 C27 W2T sing 408 n y C26 N30 W2T sing 409 n n C27 C28 W2T sing 410 n n N30 C31 W2T sing 411 n n C31 C32 W2T sing 412 n n C31 O33 W2T doub 413 n n C13 H131 W2T sing 414 n n C17 H171 W2T sing 415 n n C22 H221 W2T sing 416 n n C28 H282 W2T sing 417 n n C28 H283 W2T sing 418 n n C28 H281 W2T sing 419 n n C01 H011 W2T sing 420 n n C03 H031 W2T sing 421 n n C04 H041 W2T sing 422 n n C06 H061 W2T sing 423 n n C07 H071 W2T sing 424 n n C12 H123 W2T sing 425 n n C12 H122 W2T sing 426 n n C12 H121 W2T sing 427 n n C14 H141 W2T sing 428 n n C29 H292 W2T sing 429 n n C29 H293 W2T sing 430 n n C29 H291 W2T sing 431 n n C32 H322 W2T sing 432 n n C32 H321 W2T sing 433 n n N08 H081 W2T sing 434 n n N18 H181 W2T sing 435 n n N24 H241 W2T sing 436 n n N30 H301 W2T sing 437 n n # _atom_sites.entry_id 8UAP _atom_sites.fract_transf_matrix[1][1] 0.007254 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007254 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 W2T A 1 601 601 W2T LIG . C 3 HOH A 1 701 20 HOH HOH . C 3 HOH A 2 702 15 HOH HOH . C 3 HOH A 3 703 14 HOH HOH . C 3 HOH A 4 704 6 HOH HOH . C 3 HOH A 5 705 16 HOH HOH . C 3 HOH A 6 706 24 HOH HOH . C 3 HOH A 7 707 1 HOH HOH . C 3 HOH A 8 708 18 HOH HOH . C 3 HOH A 9 709 12 HOH HOH . C 3 HOH A 10 710 8 HOH HOH . C 3 HOH A 11 711 4 HOH HOH . C 3 HOH A 12 712 13 HOH HOH . C 3 HOH A 13 713 22 HOH HOH . C 3 HOH A 14 714 23 HOH HOH . C 3 HOH A 15 715 27 HOH HOH . C 3 HOH A 16 716 25 HOH HOH . C 3 HOH A 17 717 21 HOH HOH . C 3 HOH A 18 718 17 HOH HOH . C 3 HOH A 19 719 2 HOH HOH . C 3 HOH A 20 720 10 HOH HOH . C 3 HOH A 21 721 19 HOH HOH . C 3 HOH A 22 722 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 W2T . . . B 2 40.123 -4.381 0.396 1 109.91 ? C10 W2T 601 A 1 HETATM 2 C C13 W2T . . . B 2 39.606 -3.109 0.849 1 97.39 ? C13 W2T 601 A 1 HETATM 3 C C15 W2T . . . B 2 40.427 -3.515 3.063 1 93.5 ? C15 W2T 601 A 1 HETATM 4 C C17 W2T . . . B 2 40.803 -5.24 1.3 1 103.43 ? C17 W2T 601 A 1 HETATM 5 C C20 W2T . . . B 2 41.533 -5.321 3.754 1 112.69 ? C20 W2T 601 A 1 HETATM 6 C C22 W2T . . . B 2 42.078 -6.386 3.747 1 114.87 ? C22 W2T 601 A 1 HETATM 7 C C26 W2T . . . B 2 42.822 -8.161 6.873 1 123.31 ? C26 W2T 601 A 1 HETATM 8 C C28 W2T . . . B 2 40.59 -8.369 5.639 1 105.5 ? C28 W2T 601 A 1 HETATM 9 C C01 W2T . . . B 2 43.868 -7.437 -3.489 1 162.41 ? C01 W2T 601 A 1 HETATM 10 C C02 W2T . . . B 2 44.034 -7.086 -4.82 1 183.9 ? C02 W2T 601 A 1 HETATM 11 C C03 W2T . . . B 2 42.98 -6.536 -5.529 1 151.35 ? C03 W2T 601 A 1 HETATM 12 C C04 W2T . . . B 2 41.76 -6.333 -4.908 1 152.35 ? C04 W2T 601 A 1 HETATM 13 C C05 W2T . . . B 2 41.588 -6.683 -3.58 1 147.59 ? C05 W2T 601 A 1 HETATM 14 C C06 W2T . . . B 2 42.644 -7.234 -2.864 1 155.29 ? C06 W2T 601 A 1 HETATM 15 C C07 W2T . . . B 2 40.227 -6.441 -2.922 1 133 ? C07 W2T 601 A 1 HETATM 16 C C09 W2T . . . B 2 39.921 -4.79 -1.06 1 118.33 ? C09 W2T 601 A 1 HETATM 17 C C12 W2T . . . B 2 39.359 -7.701 -2.994 1 116.87 ? C12 W2T 601 A 1 HETATM 18 C C14 W2T . . . B 2 39.778 -2.711 2.194 1 88.34 ? C14 W2T 601 A 1 HETATM 19 C C16 W2T . . . B 2 40.976 -4.864 2.593 1 103.47 ? C16 W2T 601 A 1 HETATM 20 C C19 W2T . . . B 2 41.455 -4.553 4.86 1 101.59 ? C19 W2T 601 A 1 HETATM 21 C C23 W2T . . . B 2 42.696 -6.977 5.018 1 120.88 ? C23 W2T 601 A 1 HETATM 22 C C25 W2T . . . B 2 44.006 -7.484 6.7 1 123.01 ? C25 W2T 601 A 1 HETATM 23 C C27 W2T . . . B 2 42.015 -7.845 5.849 1 119.47 ? C27 W2T 601 A 1 HETATM 24 C C29 W2T . . . B 2 45.199 -7.563 7.651 1 124.31 ? C29 W2T 601 A 1 HETATM 25 C C31 W2T . . . B 2 43.055 -10.391 8.044 1 142.62 ? C31 W2T 601 A 1 HETATM 26 C C32 W2T . . . B 2 42.703 -11.288 9.224 1 141.58 ? C32 W2T 601 A 1 HETATM 27 F F34 W2T . . . B 2 45.231 -7.287 -5.436 1 213.07 ? F34 W2T 601 A 1 HETATM 28 N N08 W2T . . . B 2 40.432 -6.061 -1.535 1 128.02 ? N08 W2T 601 A 1 HETATM 29 N N18 W2T . . . B 2 40.795 -3.471 4.453 1 98.26 ? N18 W2T 601 A 1 HETATM 30 N N24 W2T . . . B 2 43.914 -6.75 5.558 1 125.28 ? N24 W2T 601 A 1 HETATM 31 N N30 W2T . . . B 2 42.502 -9.053 7.982 1 126.93 ? N30 W2T 601 A 1 HETATM 32 O O11 W2T . . . B 2 39.328 -4.073 -1.799 1 116.73 ? O11 W2T 601 A 1 HETATM 33 O O21 W2T . . . B 2 41.922 -4.754 6.163 1 87.57 ? O21 W2T 601 A 1 HETATM 34 O O33 W2T . . . B 2 43.772 -10.781 7.184 1 143.1 ? O33 W2T 601 A 1 HETATM 35 CL CL3 W2T . . . B 2 44.202 -11.978 9.911 1 194.14 ? CL3 W2T 601 A 1 HETATM 36 H H131 W2T . . . B 2 39.086 -2.459 0.156 1 117.2 ? H131 W2T 601 A 1 HETATM 37 H H171 W2T . . . B 2 41.184 -6.195 0.957 1 124.44 ? H171 W2T 601 A 1 HETATM 38 H H221 W2T . . . B 2 42.135 -6.945 2.821 1 138.17 ? H221 W2T 601 A 1 HETATM 39 H H282 W2T . . . B 2 40.266 -8.141 4.627 1 126.93 ? H282 W2T 601 A 1 HETATM 40 H H283 W2T . . . B 2 39.921 -7.893 6.349 1 126.93 ? H283 W2T 601 A 1 HETATM 41 H H281 W2T . . . B 2 40.573 -9.444 5.79 1 126.93 ? H281 W2T 601 A 1 HETATM 42 H H011 W2T . . . B 2 44.693 -7.87 -2.936 1 195.22 ? H011 W2T 601 A 1 HETATM 43 H H031 W2T . . . B 2 43.11 -6.264 -6.569 1 181.95 ? H031 W2T 601 A 1 HETATM 44 H H041 W2T . . . B 2 40.937 -5.9 -5.463 1 183.15 ? H041 W2T 601 A 1 HETATM 45 H H061 W2T . . . B 2 42.513 -7.503 -1.823 1 186.67 ? H061 W2T 601 A 1 HETATM 46 H H071 W2T . . . B 2 39.714 -5.647 -3.451 1 159.92 ? H071 W2T 601 A 1 HETATM 47 H H123 W2T . . . B 2 39.981 -8.578 -2.841 1 140.57 ? H123 W2T 601 A 1 HETATM 48 H H122 W2T . . . B 2 38.885 -7.759 -3.969 1 140.57 ? H122 W2T 601 A 1 HETATM 49 H H121 W2T . . . B 2 38.596 -7.659 -2.222 1 140.57 ? H121 W2T 601 A 1 HETATM 50 H H141 W2T . . . B 2 39.388 -1.758 2.529 1 106.33 ? H141 W2T 601 A 1 HETATM 51 H H292 W2T . . . B 2 46.009 -6.951 7.267 1 149.49 ? H292 W2T 601 A 1 HETATM 52 H H293 W2T . . . B 2 45.53 -8.594 7.731 1 149.49 ? H293 W2T 601 A 1 HETATM 53 H H291 W2T . . . B 2 44.904 -7.2 8.632 1 149.49 ? H291 W2T 601 A 1 HETATM 54 H H322 W2T . . . B 2 42.192 -10.705 9.983 1 170.22 ? H322 W2T 601 A 1 HETATM 55 H H321 W2T . . . B 2 42.056 -12.092 8.888 1 170.22 ? H321 W2T 601 A 1 HETATM 56 H H081 W2T . . . B 2 40.923 -6.672 -0.912 1 153.94 ? H081 W2T 601 A 1 HETATM 57 H H181 W2T . . . B 2 40.576 -2.701 5.054 1 118.24 ? H181 W2T 601 A 1 HETATM 58 H H241 W2T . . . B 2 44.622 -6.149 5.184 1 150.65 ? H241 W2T 601 A 1 HETATM 59 H H301 W2T . . . B 2 41.891 -8.737 8.71 1 152.64 ? H301 W2T 601 A 1 # _model_server_stats.io_time_ms 119 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 59 #