data_8UB0 # _model_server_result.job_id 5SAMpL3mqVxjftSOP798lA _model_server_result.datetime_utc '2024-12-11 22:28:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ub0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 8UB0 # _exptl.entry_id 8UB0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.18 _cell.angle_gamma 90 _cell.entry_id 8UB0 _cell.length_a 100.829 _cell.length_b 32.807 _cell.length_c 74.156 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UB0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? disulf ? disulf3 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? disulf ? disulf4 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf5 B SG CYS 26 B CYS 26 1_555 B SG CYS 84 B CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? disulf ? disulf6 B SG CYS 40 B CYS 40 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? disulf ? disulf7 B SG CYS 58 B CYS 58 1_555 B SG CYS 110 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? disulf ? disulf8 B SG CYS 65 B CYS 65 1_555 B SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 333 n n C1 C2 PEG sing 334 n n C1 H11 PEG sing 335 n n C1 H12 PEG sing 336 n n O1 HO1 PEG sing 337 n n C2 O2 PEG sing 338 n n C2 H21 PEG sing 339 n n C2 H22 PEG sing 340 n n O2 C3 PEG sing 341 n n C3 C4 PEG sing 342 n n C3 H31 PEG sing 343 n n C3 H32 PEG sing 344 n n C4 O4 PEG sing 345 n n C4 H41 PEG sing 346 n n C4 H42 PEG sing 347 n n O4 HO4 PEG sing 348 n n # _atom_sites.entry_id 8UB0 _atom_sites.fract_transf_matrix[1][1] 0.009918 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000031 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.030481 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013485 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AMP A 1 201 201 AMP AMP . D 3 PEG A 1 202 1 PEG PEG . E 3 PEG A 1 203 2 PEG PEG . F 4 A1BA4 B 1 201 201 A1BA4 AXV . G 5 HOH A 1 301 47 HOH HOH . G 5 HOH A 2 302 26 HOH HOH . G 5 HOH A 3 303 66 HOH HOH . G 5 HOH A 4 304 7 HOH HOH . G 5 HOH A 5 305 16 HOH HOH . G 5 HOH A 6 306 33 HOH HOH . G 5 HOH A 7 307 50 HOH HOH . G 5 HOH A 8 308 20 HOH HOH . G 5 HOH A 9 309 71 HOH HOH . G 5 HOH A 10 310 12 HOH HOH . G 5 HOH A 11 311 38 HOH HOH . G 5 HOH A 12 312 28 HOH HOH . G 5 HOH A 13 313 44 HOH HOH . G 5 HOH A 14 314 27 HOH HOH . G 5 HOH A 15 315 37 HOH HOH . G 5 HOH A 16 316 5 HOH HOH . G 5 HOH A 17 317 11 HOH HOH . G 5 HOH A 18 318 36 HOH HOH . G 5 HOH A 19 319 81 HOH HOH . G 5 HOH A 20 320 8 HOH HOH . G 5 HOH A 21 321 22 HOH HOH . G 5 HOH A 22 322 75 HOH HOH . G 5 HOH A 23 323 53 HOH HOH . G 5 HOH A 24 324 41 HOH HOH . G 5 HOH A 25 325 80 HOH HOH . G 5 HOH A 26 326 45 HOH HOH . G 5 HOH A 27 327 18 HOH HOH . G 5 HOH A 28 328 51 HOH HOH . G 5 HOH A 29 329 34 HOH HOH . G 5 HOH A 30 330 52 HOH HOH . G 5 HOH A 31 331 32 HOH HOH . G 5 HOH A 32 332 35 HOH HOH . G 5 HOH A 33 333 42 HOH HOH . G 5 HOH A 34 334 70 HOH HOH . G 5 HOH A 35 335 3 HOH HOH . G 5 HOH A 36 336 23 HOH HOH . G 5 HOH A 37 337 43 HOH HOH . G 5 HOH A 38 338 9 HOH HOH . G 5 HOH A 39 339 4 HOH HOH . G 5 HOH A 40 340 14 HOH HOH . G 5 HOH A 41 341 17 HOH HOH . G 5 HOH A 42 342 6 HOH HOH . G 5 HOH A 43 343 78 HOH HOH . G 5 HOH A 44 344 31 HOH HOH . G 5 HOH A 45 345 24 HOH HOH . G 5 HOH A 46 346 74 HOH HOH . G 5 HOH A 47 347 67 HOH HOH . G 5 HOH A 48 348 65 HOH HOH . G 5 HOH A 49 349 13 HOH HOH . G 5 HOH A 50 350 19 HOH HOH . G 5 HOH A 51 351 21 HOH HOH . G 5 HOH A 52 352 39 HOH HOH . H 5 HOH B 1 301 76 HOH HOH . H 5 HOH B 2 302 73 HOH HOH . H 5 HOH B 3 303 60 HOH HOH . H 5 HOH B 4 304 55 HOH HOH . H 5 HOH B 5 305 57 HOH HOH . H 5 HOH B 6 306 10 HOH HOH . H 5 HOH B 7 307 77 HOH HOH . H 5 HOH B 8 308 49 HOH HOH . H 5 HOH B 9 309 61 HOH HOH . H 5 HOH B 10 310 48 HOH HOH . H 5 HOH B 11 311 62 HOH HOH . H 5 HOH B 12 312 54 HOH HOH . H 5 HOH B 13 313 40 HOH HOH . H 5 HOH B 14 314 25 HOH HOH . H 5 HOH B 15 315 69 HOH HOH . H 5 HOH B 16 316 72 HOH HOH . H 5 HOH B 17 317 15 HOH HOH . H 5 HOH B 18 318 46 HOH HOH . H 5 HOH B 19 319 30 HOH HOH . H 5 HOH B 20 320 56 HOH HOH . H 5 HOH B 21 321 59 HOH HOH . H 5 HOH B 22 322 29 HOH HOH . H 5 HOH B 23 323 58 HOH HOH . H 5 HOH B 24 324 68 HOH HOH . H 5 HOH B 25 325 64 HOH HOH . H 5 HOH B 26 326 63 HOH HOH . H 5 HOH B 27 327 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 PEG . . . D 3 18.148 -29.785 -43.12 1 48.48 ? O2 PEG 202 A 1 HETATM 2 C C3 PEG . . . D 3 19.564 -29.737 -43.017 1 46.22 ? C3 PEG 202 A 1 HETATM 3 C C4 PEG . . . D 3 19.951 -29.557 -41.593 1 45.42 ? C4 PEG 202 A 1 HETATM 4 O O4 PEG . . . D 3 21.284 -29.947 -41.363 1 50.01 ? O4 PEG 202 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 4 #