data_8UB2 # _model_server_result.job_id -j8dkT1lvsAyQI34FXve8g _model_server_result.datetime_utc '2024-12-12 00:46:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ub2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 8UB2 # _exptl.entry_id 8UB2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.81 _cell.angle_gamma 90 _cell.entry_id 8UB2 _cell.length_a 101.054 _cell.length_b 32.514 _cell.length_c 72.935 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UB2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf2 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? disulf ? disulf3 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? disulf ? disulf4 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? disulf ? disulf5 B SG CYS 26 B CYS 26 1_555 B SG CYS 84 B CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? disulf ? disulf6 B SG CYS 40 B CYS 40 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf7 B SG CYS 58 B CYS 58 1_555 B SG CYS 110 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? disulf ? disulf8 B SG CYS 65 B CYS 65 1_555 B SG CYS 72 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 276 n n C1 C2 PEG sing 277 n n C1 H11 PEG sing 278 n n C1 H12 PEG sing 279 n n O1 HO1 PEG sing 280 n n C2 O2 PEG sing 281 n n C2 H21 PEG sing 282 n n C2 H22 PEG sing 283 n n O2 C3 PEG sing 284 n n C3 C4 PEG sing 285 n n C3 H31 PEG sing 286 n n C3 H32 PEG sing 287 n n C4 O4 PEG sing 288 n n C4 H41 PEG sing 289 n n C4 H42 PEG sing 290 n n O4 HO4 PEG sing 291 n n # _atom_sites.entry_id 8UB2 _atom_sites.fract_transf_matrix[1][1] 0.009896 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00014 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.030756 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013712 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AMP A 1 201 201 AMP AMP . D 3 PEG A 1 202 203 PEG PEG . E 3 PEG A 1 203 204 PEG PEG . F 3 PEG B 1 201 201 PEG PEG . G 3 PEG B 1 202 202 PEG PEG . H 3 PEG B 1 203 205 PEG PEG . I 4 HOH A 1 301 66 HOH HOH . I 4 HOH A 2 302 70 HOH HOH . I 4 HOH A 3 303 39 HOH HOH . I 4 HOH A 4 304 67 HOH HOH . I 4 HOH A 5 305 37 HOH HOH . I 4 HOH A 6 306 13 HOH HOH . I 4 HOH A 7 307 21 HOH HOH . I 4 HOH A 8 308 29 HOH HOH . I 4 HOH A 9 309 101 HOH HOH . I 4 HOH A 10 310 77 HOH HOH . I 4 HOH A 11 311 15 HOH HOH . I 4 HOH A 12 312 19 HOH HOH . I 4 HOH A 13 313 10 HOH HOH . I 4 HOH A 14 314 9 HOH HOH . I 4 HOH A 15 315 33 HOH HOH . I 4 HOH A 16 316 74 HOH HOH . I 4 HOH A 17 317 20 HOH HOH . I 4 HOH A 18 318 32 HOH HOH . I 4 HOH A 19 319 3 HOH HOH . I 4 HOH A 20 320 98 HOH HOH . I 4 HOH A 21 321 14 HOH HOH . I 4 HOH A 22 322 5 HOH HOH . I 4 HOH A 23 323 63 HOH HOH . I 4 HOH A 24 324 28 HOH HOH . I 4 HOH A 25 325 4 HOH HOH . I 4 HOH A 26 326 41 HOH HOH . I 4 HOH A 27 327 40 HOH HOH . I 4 HOH A 28 328 103 HOH HOH . I 4 HOH A 29 329 7 HOH HOH . I 4 HOH A 30 330 90 HOH HOH . I 4 HOH A 31 331 69 HOH HOH . I 4 HOH A 32 332 18 HOH HOH . I 4 HOH A 33 333 16 HOH HOH . I 4 HOH A 34 334 76 HOH HOH . I 4 HOH A 35 335 68 HOH HOH . I 4 HOH A 36 336 61 HOH HOH . I 4 HOH A 37 337 17 HOH HOH . I 4 HOH A 38 338 75 HOH HOH . I 4 HOH A 39 339 72 HOH HOH . I 4 HOH A 40 340 73 HOH HOH . I 4 HOH A 41 341 2 HOH HOH . I 4 HOH A 42 342 71 HOH HOH . I 4 HOH A 43 343 6 HOH HOH . I 4 HOH A 44 344 62 HOH HOH . I 4 HOH A 45 345 11 HOH HOH . I 4 HOH A 46 346 12 HOH HOH . I 4 HOH A 47 347 65 HOH HOH . I 4 HOH A 48 348 36 HOH HOH . I 4 HOH A 49 349 8 HOH HOH . I 4 HOH A 50 350 95 HOH HOH . I 4 HOH A 51 351 38 HOH HOH . I 4 HOH A 52 352 64 HOH HOH . J 4 HOH B 1 301 102 HOH HOH . J 4 HOH B 2 302 60 HOH HOH . J 4 HOH B 3 303 49 HOH HOH . J 4 HOH B 4 304 52 HOH HOH . J 4 HOH B 5 305 93 HOH HOH . J 4 HOH B 6 306 79 HOH HOH . J 4 HOH B 7 307 54 HOH HOH . J 4 HOH B 8 308 34 HOH HOH . J 4 HOH B 9 309 92 HOH HOH . J 4 HOH B 10 310 99 HOH HOH . J 4 HOH B 11 311 48 HOH HOH . J 4 HOH B 12 312 58 HOH HOH . J 4 HOH B 13 313 44 HOH HOH . J 4 HOH B 14 314 100 HOH HOH . J 4 HOH B 15 315 22 HOH HOH . J 4 HOH B 16 316 47 HOH HOH . J 4 HOH B 17 317 59 HOH HOH . J 4 HOH B 18 318 83 HOH HOH . J 4 HOH B 19 319 27 HOH HOH . J 4 HOH B 20 320 88 HOH HOH . J 4 HOH B 21 321 1 HOH HOH . J 4 HOH B 22 322 23 HOH HOH . J 4 HOH B 23 323 84 HOH HOH . J 4 HOH B 24 324 89 HOH HOH . J 4 HOH B 25 325 31 HOH HOH . J 4 HOH B 26 326 45 HOH HOH . J 4 HOH B 27 327 43 HOH HOH . J 4 HOH B 28 328 57 HOH HOH . J 4 HOH B 29 329 87 HOH HOH . J 4 HOH B 30 330 50 HOH HOH . J 4 HOH B 31 331 56 HOH HOH . J 4 HOH B 32 332 24 HOH HOH . J 4 HOH B 33 333 81 HOH HOH . J 4 HOH B 34 334 25 HOH HOH . J 4 HOH B 35 335 55 HOH HOH . J 4 HOH B 36 336 35 HOH HOH . J 4 HOH B 37 337 42 HOH HOH . J 4 HOH B 38 338 94 HOH HOH . J 4 HOH B 39 339 51 HOH HOH . J 4 HOH B 40 340 86 HOH HOH . J 4 HOH B 41 341 85 HOH HOH . J 4 HOH B 42 342 96 HOH HOH . J 4 HOH B 43 343 91 HOH HOH . J 4 HOH B 44 344 82 HOH HOH . J 4 HOH B 45 345 80 HOH HOH . J 4 HOH B 46 346 78 HOH HOH . J 4 HOH B 47 347 46 HOH HOH . J 4 HOH B 48 348 104 HOH HOH . J 4 HOH B 49 349 53 HOH HOH . J 4 HOH B 50 350 30 HOH HOH . J 4 HOH B 51 351 97 HOH HOH . J 4 HOH B 52 352 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 PEG . . . F 3 27.058 -23.668 -34.173 1 31.56 ? O2 PEG 201 B 1 HETATM 2 C C3 PEG . . . F 3 26.767 -22.472 -33.44 1 30.98 ? C3 PEG 201 B 1 HETATM 3 C C4 PEG . . . F 3 27.649 -21.306 -33.861 1 32.56 ? C4 PEG 201 B 1 HETATM 4 O O4 PEG . . . F 3 28.508 -20.806 -32.797 1 28.91 ? O4 PEG 201 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 37 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 364 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #