data_8UCJ # _model_server_result.job_id 0n7rQROayDqm9wauyWmfXQ _model_server_result.datetime_utc '2024-10-10 11:26:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ucj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":603}' # _entry.id 8UCJ # _exptl.entry_id 8UCJ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 852.837 _entity.id 14 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEME-A _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UCJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UCJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 14 N N N ? 14 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 K SG CYS 20 j CYS 25 1_555 K SG CYS 52 j CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf2 K SG CYS 30 j CYS 35 1_555 K SG CYS 41 j CYS 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc1 B ND1 HIS 243 a HIS 243 1_555 M CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc2 B NE2 HIS 292 a HIS 292 1_555 M CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc3 B NE2 HIS 293 a HIS 293 1_555 M CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc4 B NE2 HIS 380 a HIS 380 1_555 N FE HEA . a HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? metalc ? metalc5 C SG CYS 206 b CYS 219 1_555 R CU1 CUA . b CUA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc6 C SG CYS 210 b CYS 223 1_555 R CU1 CUA . b CUA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc7 C SD MET 217 b MET 230 1_555 R CU2 CUA . b CUA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc8 E SG CYS 112 d CYS 125 1_555 T ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc9 E ND1 HIS 120 d HIS 133 1_555 T ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc10 E NE2 HIS 120 d HIS 133 1_555 T ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc11 E SG CYS 135 d CYS 148 1_555 T ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc12 E SG CYS 138 d CYS 151 1_555 T ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? # _chem_comp.formula 'C49 H56 Fe N4 O6' _chem_comp.formula_weight 852.837 _chem_comp.id HEA _chem_comp.mon_nstd_flag . _chem_comp.name HEME-A _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEA sing 130 n n FE NB HEA sing 131 n n FE NC HEA sing 132 n n FE ND HEA sing 133 n n CHA C1A HEA doub 134 n n CHA C4D HEA sing 135 n n CHA HHA HEA sing 136 n n CHB C4A HEA doub 137 n n CHB C1B HEA sing 138 n n CHB HHB HEA sing 139 n n CHC C4B HEA doub 140 n n CHC C1C HEA sing 141 n n CHC HHC HEA sing 142 n n CHD C4C HEA sing 143 n n CHD C1D HEA doub 144 n n CHD HHD HEA sing 145 n n NA C1A HEA sing 146 n y NA C4A HEA sing 147 n y C1A C2A HEA sing 148 n y C2A C3A HEA doub 149 n y C2A CAA HEA sing 150 n n C3A C4A HEA sing 151 n y C3A CMA HEA sing 152 n n CMA OMA HEA doub 153 n n CMA HMA HEA sing 154 n n CAA CBA HEA sing 155 n n CAA HAA1 HEA sing 156 n n CAA HAA2 HEA sing 157 n n CBA CGA HEA sing 158 n n CBA HBA1 HEA sing 159 n n CBA HBA2 HEA sing 160 n n CGA O1A HEA doub 161 n n CGA O2A HEA sing 162 n n O2A H2A HEA sing 163 n n NB C1B HEA doub 164 n n NB C4B HEA sing 165 n n C1B C2B HEA sing 166 n n C2B C3B HEA doub 167 n n C2B CMB HEA sing 168 n n C3B C4B HEA sing 169 n n C3B C11 HEA sing 170 n n CMB HMB1 HEA sing 171 n n CMB HMB2 HEA sing 172 n n CMB HMB3 HEA sing 173 n n NC C1C HEA sing 174 n y NC C4C HEA sing 175 n y C1C C2C HEA doub 176 n y C2C C3C HEA sing 177 n y C2C CMC HEA sing 178 n n C3C C4C HEA doub 179 n y C3C CAC HEA sing 180 n n CMC HMC1 HEA sing 181 n n CMC HMC2 HEA sing 182 n n CMC HMC3 HEA sing 183 n n CAC CBC HEA doub 184 n n CAC HAC HEA sing 185 n n CBC HBC1 HEA sing 186 n n CBC HBC2 HEA sing 187 n n ND C1D HEA sing 188 n n ND C4D HEA doub 189 n n C1D C2D HEA sing 190 n n C2D C3D HEA doub 191 n n C2D CMD HEA sing 192 n n C3D C4D HEA sing 193 n n C3D CAD HEA sing 194 n n CMD HMD1 HEA sing 195 n n CMD HMD2 HEA sing 196 n n CMD HMD3 HEA sing 197 n n CAD CBD HEA sing 198 n n CAD HAD1 HEA sing 199 n n CAD HAD2 HEA sing 200 n n CBD CGD HEA sing 201 n n CBD HBD1 HEA sing 202 n n CBD HBD2 HEA sing 203 n n CGD O1D HEA doub 204 n n CGD O2D HEA sing 205 n n O2D H2D HEA sing 206 n n C11 O11 HEA sing 207 n n C11 C12 HEA sing 208 n n C11 H11 HEA sing 209 n n O11 HO1 HEA sing 210 n n C12 C13 HEA sing 211 n n C12 H121 HEA sing 212 n n C12 H122 HEA sing 213 n n C13 C14 HEA sing 214 n n C13 H131 HEA sing 215 n n C13 H132 HEA sing 216 n n C14 C15 HEA doub 217 e n C14 H14 HEA sing 218 n n C15 C16 HEA sing 219 n n C15 C26 HEA sing 220 n n C16 C17 HEA sing 221 n n C16 H161 HEA sing 222 n n C16 H162 HEA sing 223 n n C17 C18 HEA sing 224 n n C17 H171 HEA sing 225 n n C17 H172 HEA sing 226 n n C18 C19 HEA doub 227 e n C18 H18 HEA sing 228 n n C19 C20 HEA sing 229 n n C19 C27 HEA sing 230 n n C20 C21 HEA sing 231 n n C20 H201 HEA sing 232 n n C20 H202 HEA sing 233 n n C21 C22 HEA sing 234 n n C21 H211 HEA sing 235 n n C21 H212 HEA sing 236 n n C22 C23 HEA doub 237 n n C22 H22 HEA sing 238 n n C23 C24 HEA sing 239 n n C23 C25 HEA sing 240 n n C24 H241 HEA sing 241 n n C24 H242 HEA sing 242 n n C24 H243 HEA sing 243 n n C25 H251 HEA sing 244 n n C25 H252 HEA sing 245 n n C25 H253 HEA sing 246 n n C26 H261 HEA sing 247 n n C26 H262 HEA sing 248 n n C26 H263 HEA sing 249 n n C27 H271 HEA sing 250 n n C27 H272 HEA sing 251 n n C27 H273 HEA sing 252 n n # _atom_sites.entry_id 8UCJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 13 CU a 1 601 601 CU CU . N 14 HEA a 1 602 604 HEA HEA . O 14 HEA a 1 603 605 HEA HEA . P 15 PTY a 1 604 607 PTY PTY . Q 15 PTY a 1 605 300 PTY PTY . R 16 CUA b 1 301 299 CUA CUA . S 15 PTY c 1 301 301 PTY PTY . T 17 ZN d 1 201 215 ZN ZN . U 15 PTY e 1 201 606 PTY PTY . V 18 PCF k 1 201 302 PCF PCF . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEA . . . O 14 143.321 127.994 134.513 1 56.58 ? FE HEA 603 a 1 HETATM 2 C CHA HEA . . . O 14 145.878 125.844 135.127 1 56.58 ? CHA HEA 603 a 1 HETATM 3 C CHB HEA . . . O 14 141.221 125.963 135.852 1 56.58 ? CHB HEA 603 a 1 HETATM 4 C CHC HEA . . . O 14 141.056 128.917 132.191 1 56.58 ? CHC HEA 603 a 1 HETATM 5 C CHD HEA . . . O 14 145.363 130.242 133.54 1 56.58 ? CHD HEA 603 a 1 HETATM 6 N NA HEA . . . O 14 143.508 126.244 135.299 1 56.58 ? NA HEA 603 a 1 HETATM 7 C C1A HEA . . . O 14 144.655 125.464 135.522 1 56.58 ? C1A HEA 603 a 1 HETATM 8 C C2A HEA . . . O 14 144.338 124.299 136.169 1 56.58 ? C2A HEA 603 a 1 HETATM 9 C C3A HEA . . . O 14 142.982 124.302 136.394 1 56.58 ? C3A HEA 603 a 1 HETATM 10 C C4A HEA . . . O 14 142.486 125.508 135.885 1 56.58 ? C4A HEA 603 a 1 HETATM 11 C CMA HEA . . . O 14 142.223 123.243 137.054 1 56.58 ? CMA HEA 603 a 1 HETATM 12 O OMA HEA . . . O 14 141.317 123.491 137.817 1 56.58 ? OMA HEA 603 a 1 HETATM 13 C CAA HEA . . . O 14 145.307 123.207 136.535 1 56.58 ? CAA HEA 603 a 1 HETATM 14 C CBA HEA . . . O 14 145.953 123.483 137.889 1 56.58 ? CBA HEA 603 a 1 HETATM 15 C CGA HEA . . . O 14 146.922 122.374 138.195 1 56.58 ? CGA HEA 603 a 1 HETATM 16 O O1A HEA . . . O 14 146.559 121.438 138.859 1 56.58 ? O1A HEA 603 a 1 HETATM 17 O O2A HEA . . . O 14 148.059 122.278 137.499 1 56.58 ? O2A HEA 603 a 1 HETATM 18 N NB HEA . . . O 14 141.522 127.484 134.047 1 56.58 ? NB HEA 603 a 1 HETATM 19 C C1B HEA . . . O 14 140.74 126.636 134.762 1 56.58 ? C1B HEA 603 a 1 HETATM 20 C C2B HEA . . . O 14 139.416 126.53 134.183 1 56.58 ? C2B HEA 603 a 1 HETATM 21 C C3B HEA . . . O 14 139.383 127.366 133.137 1 56.58 ? C3B HEA 603 a 1 HETATM 22 C C4B HEA . . . O 14 140.686 127.989 133.097 1 56.58 ? C4B HEA 603 a 1 HETATM 23 C CMB HEA . . . O 14 138.272 125.661 134.618 1 56.58 ? CMB HEA 603 a 1 HETATM 24 N NC HEA . . . O 14 143.242 129.317 133.107 1 56.58 ? NC HEA 603 a 1 HETATM 25 C C1C HEA . . . O 14 142.199 129.618 132.229 1 56.58 ? C1C HEA 603 a 1 HETATM 26 C C2C HEA . . . O 14 142.532 130.667 131.422 1 56.58 ? C2C HEA 603 a 1 HETATM 27 C C3C HEA . . . O 14 143.795 131.093 131.778 1 56.58 ? C3C HEA 603 a 1 HETATM 28 C C4C HEA . . . O 14 144.216 130.27 132.831 1 56.58 ? C4C HEA 603 a 1 HETATM 29 C CMC HEA . . . O 14 141.61 131.218 130.371 1 56.58 ? CMC HEA 603 a 1 HETATM 30 C CAC HEA . . . O 14 144.542 132.201 131.171 1 56.58 ? CAC HEA 603 a 1 HETATM 31 C CBC HEA . . . O 14 145.526 131.942 130.324 1 56.58 ? CBC HEA 603 a 1 HETATM 32 N ND HEA . . . O 14 145.235 127.993 134.313 1 56.58 ? ND HEA 603 a 1 HETATM 33 C C1D HEA . . . O 14 145.961 129.08 133.94 1 56.58 ? C1D HEA 603 a 1 HETATM 34 C C2D HEA . . . O 14 147.384 128.819 133.958 1 56.58 ? C2D HEA 603 a 1 HETATM 35 C C3D HEA . . . O 14 147.513 127.564 134.41 1 56.58 ? C3D HEA 603 a 1 HETATM 36 C C4D HEA . . . O 14 146.175 127.078 134.66 1 56.58 ? C4D HEA 603 a 1 HETATM 37 C CMD HEA . . . O 14 148.496 129.752 133.557 1 56.58 ? CMD HEA 603 a 1 HETATM 38 C CAD HEA . . . O 14 148.796 126.82 134.644 1 56.58 ? CAD HEA 603 a 1 HETATM 39 C CBD HEA . . . O 14 149.156 126.939 136.128 1 56.58 ? CBD HEA 603 a 1 HETATM 40 C CGD HEA . . . O 14 150.618 127.239 136.347 1 56.58 ? CGD HEA 603 a 1 HETATM 41 O O1D HEA . . . O 14 151.407 126.325 136.369 1 56.58 ? O1D HEA 603 a 1 HETATM 42 O O2D HEA . . . O 14 150.942 128.348 137.02 1 56.58 ? O2D HEA 603 a 1 HETATM 43 C C11 HEA . . . O 14 138.174 127.618 132.266 1 56.58 ? C11 HEA 603 a 1 HETATM 44 O O11 HEA . . . O 14 137.88 129.015 132.316 1 56.58 ? O11 HEA 603 a 1 HETATM 45 C C12 HEA . . . O 14 138.244 127.222 130.794 1 56.58 ? C12 HEA 603 a 1 HETATM 46 C C13 HEA . . . O 14 136.888 127.663 130.236 1 56.58 ? C13 HEA 603 a 1 HETATM 47 C C14 HEA . . . O 14 136.725 127.303 128.784 1 56.58 ? C14 HEA 603 a 1 HETATM 48 C C15 HEA . . . O 14 135.657 126.676 128.364 1 56.58 ? C15 HEA 603 a 1 HETATM 49 C C16 HEA . . . O 14 135.196 126.861 126.944 1 56.58 ? C16 HEA 603 a 1 HETATM 50 C C17 HEA . . . O 14 133.713 127.225 126.95 1 56.58 ? C17 HEA 603 a 1 HETATM 51 C C18 HEA . . . O 14 132.999 126.515 125.83 1 56.58 ? C18 HEA 603 a 1 HETATM 52 C C19 HEA . . . O 14 131.751 126.141 125.96 1 56.58 ? C19 HEA 603 a 1 HETATM 53 C C20 HEA . . . O 14 131.178 125.819 127.316 1 56.58 ? C20 HEA 603 a 1 HETATM 54 C C21 HEA . . . O 14 130.619 124.397 127.3 1 56.58 ? C21 HEA 603 a 1 HETATM 55 C C22 HEA . . . O 14 130.285 123.947 128.7 1 56.58 ? C22 HEA 603 a 1 HETATM 56 C C23 HEA . . . O 14 130.857 122.892 129.226 1 56.58 ? C23 HEA 603 a 1 HETATM 57 C C24 HEA . . . O 14 130.175 122.166 130.353 1 56.58 ? C24 HEA 603 a 1 HETATM 58 C C25 HEA . . . O 14 132.288 122.558 128.906 1 56.58 ? C25 HEA 603 a 1 HETATM 59 C C26 HEA . . . O 14 134.941 125.695 129.251 1 56.58 ? C26 HEA 603 a 1 HETATM 60 C C27 HEA . . . O 14 130.923 125.896 124.729 1 56.58 ? C27 HEA 603 a 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 60 #