data_8UCL # _model_server_result.job_id e0vyZ2mevFMzHgi23gPaZw _model_server_result.datetime_utc '2024-10-10 11:18:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ucl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":603}' # _entry.id 8UCL # _exptl.entry_id 8UCL _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 852.837 _entity.id 13 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEME-A _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UCL _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UCL _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 13 M N N ? 13 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B ND1 HIS 243 a HIS 243 1_555 L CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 B NE2 HIS 292 a HIS 292 1_555 L CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.527 ? metalc ? metalc3 C SG CYS 206 b CYS 219 1_555 O CU1 CUA . b CUA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc4 C SG CYS 210 b CYS 223 1_555 O CU1 CUA . b CUA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc5 C SD MET 217 b MET 230 1_555 O CU2 CUA . b CUA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? metalc ? metalc6 E SG CYS 82 d CYS 125 1_555 S ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc7 E ND1 HIS 90 d HIS 133 1_555 S ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc8 E SG CYS 105 d CYS 148 1_555 S ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc9 E SG CYS 108 d CYS 151 1_555 S ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? # _chem_comp.formula 'C49 H56 Fe N4 O6' _chem_comp.formula_weight 852.837 _chem_comp.id HEA _chem_comp.mon_nstd_flag . _chem_comp.name HEME-A _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEA sing 182 n n FE NB HEA sing 183 n n FE NC HEA sing 184 n n FE ND HEA sing 185 n n CHA C1A HEA doub 186 n n CHA C4D HEA sing 187 n n CHA HHA HEA sing 188 n n CHB C4A HEA doub 189 n n CHB C1B HEA sing 190 n n CHB HHB HEA sing 191 n n CHC C4B HEA doub 192 n n CHC C1C HEA sing 193 n n CHC HHC HEA sing 194 n n CHD C4C HEA sing 195 n n CHD C1D HEA doub 196 n n CHD HHD HEA sing 197 n n NA C1A HEA sing 198 n y NA C4A HEA sing 199 n y C1A C2A HEA sing 200 n y C2A C3A HEA doub 201 n y C2A CAA HEA sing 202 n n C3A C4A HEA sing 203 n y C3A CMA HEA sing 204 n n CMA OMA HEA doub 205 n n CMA HMA HEA sing 206 n n CAA CBA HEA sing 207 n n CAA HAA1 HEA sing 208 n n CAA HAA2 HEA sing 209 n n CBA CGA HEA sing 210 n n CBA HBA1 HEA sing 211 n n CBA HBA2 HEA sing 212 n n CGA O1A HEA doub 213 n n CGA O2A HEA sing 214 n n O2A H2A HEA sing 215 n n NB C1B HEA doub 216 n n NB C4B HEA sing 217 n n C1B C2B HEA sing 218 n n C2B C3B HEA doub 219 n n C2B CMB HEA sing 220 n n C3B C4B HEA sing 221 n n C3B C11 HEA sing 222 n n CMB HMB1 HEA sing 223 n n CMB HMB2 HEA sing 224 n n CMB HMB3 HEA sing 225 n n NC C1C HEA sing 226 n y NC C4C HEA sing 227 n y C1C C2C HEA doub 228 n y C2C C3C HEA sing 229 n y C2C CMC HEA sing 230 n n C3C C4C HEA doub 231 n y C3C CAC HEA sing 232 n n CMC HMC1 HEA sing 233 n n CMC HMC2 HEA sing 234 n n CMC HMC3 HEA sing 235 n n CAC CBC HEA doub 236 n n CAC HAC HEA sing 237 n n CBC HBC1 HEA sing 238 n n CBC HBC2 HEA sing 239 n n ND C1D HEA sing 240 n n ND C4D HEA doub 241 n n C1D C2D HEA sing 242 n n C2D C3D HEA doub 243 n n C2D CMD HEA sing 244 n n C3D C4D HEA sing 245 n n C3D CAD HEA sing 246 n n CMD HMD1 HEA sing 247 n n CMD HMD2 HEA sing 248 n n CMD HMD3 HEA sing 249 n n CAD CBD HEA sing 250 n n CAD HAD1 HEA sing 251 n n CAD HAD2 HEA sing 252 n n CBD CGD HEA sing 253 n n CBD HBD1 HEA sing 254 n n CBD HBD2 HEA sing 255 n n CGD O1D HEA doub 256 n n CGD O2D HEA sing 257 n n O2D H2D HEA sing 258 n n C11 O11 HEA sing 259 n n C11 C12 HEA sing 260 n n C11 H11 HEA sing 261 n n O11 HO1 HEA sing 262 n n C12 C13 HEA sing 263 n n C12 H121 HEA sing 264 n n C12 H122 HEA sing 265 n n C13 C14 HEA sing 266 n n C13 H131 HEA sing 267 n n C13 H132 HEA sing 268 n n C14 C15 HEA doub 269 e n C14 H14 HEA sing 270 n n C15 C16 HEA sing 271 n n C15 C26 HEA sing 272 n n C16 C17 HEA sing 273 n n C16 H161 HEA sing 274 n n C16 H162 HEA sing 275 n n C17 C18 HEA sing 276 n n C17 H171 HEA sing 277 n n C17 H172 HEA sing 278 n n C18 C19 HEA doub 279 e n C18 H18 HEA sing 280 n n C19 C20 HEA sing 281 n n C19 C27 HEA sing 282 n n C20 C21 HEA sing 283 n n C20 H201 HEA sing 284 n n C20 H202 HEA sing 285 n n C21 C22 HEA sing 286 n n C21 H211 HEA sing 287 n n C21 H212 HEA sing 288 n n C22 C23 HEA doub 289 n n C22 H22 HEA sing 290 n n C23 C24 HEA sing 291 n n C23 C25 HEA sing 292 n n C24 H241 HEA sing 293 n n C24 H242 HEA sing 294 n n C24 H243 HEA sing 295 n n C25 H251 HEA sing 296 n n C25 H252 HEA sing 297 n n C25 H253 HEA sing 298 n n C26 H261 HEA sing 299 n n C26 H262 HEA sing 300 n n C26 H263 HEA sing 301 n n C27 H271 HEA sing 302 n n C27 H272 HEA sing 303 n n C27 H273 HEA sing 304 n n # _atom_sites.entry_id 8UCL _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 11 EBZ A 1 601 601 EBZ TBZ . L 12 CU a 1 601 601 CU CU . M 13 HEA a 1 602 602 HEA HEA . N 13 HEA a 1 603 603 HEA HEA . O 14 CUA b 1 301 301 CUA CUA . P 15 PTY b 1 302 302 PTY PTY . Q 15 PTY c 1 301 605 PTY PTY . R 15 PTY c 1 302 301 PTY PTY . S 16 ZN d 1 201 201 ZN ZN . T 15 PTY e 1 201 604 PTY PTY . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEA . . . N 13 131.208 147.784 129.799 1 53.46 ? FE HEA 603 a 1 HETATM 2 C CHA HEA . . . N 13 128.61 146.552 130.763 1 53.46 ? CHA HEA 603 a 1 HETATM 3 C CHB HEA . . . N 13 129.962 150.867 129.408 1 53.46 ? CHB HEA 603 a 1 HETATM 4 C CHC HEA . . . N 13 134.099 148.689 129.984 1 53.46 ? CHC HEA 603 a 1 HETATM 5 C CHD HEA . . . N 13 131.696 145.594 127.324 1 53.46 ? CHD HEA 603 a 1 HETATM 6 N NA HEA . . . N 13 129.508 148.596 130.035 1 53.46 ? NA HEA 603 a 1 HETATM 7 C C1A HEA . . . N 13 128.424 147.883 130.536 1 53.46 ? C1A HEA 603 a 1 HETATM 8 C C2A HEA . . . N 13 127.338 148.727 130.625 1 53.46 ? C2A HEA 603 a 1 HETATM 9 C C3A HEA . . . N 13 127.756 149.986 130.222 1 53.46 ? C3A HEA 603 a 1 HETATM 10 C C4A HEA . . . N 13 129.107 149.91 129.861 1 53.46 ? C4A HEA 603 a 1 HETATM 11 C CMA HEA . . . N 13 126.932 151.186 130.181 1 53.46 ? CMA HEA 603 a 1 HETATM 12 O OMA HEA . . . N 13 126.032 151.34 130.98 1 53.46 ? OMA HEA 603 a 1 HETATM 13 C CAA HEA . . . N 13 125.948 148.378 131.081 1 53.46 ? CAA HEA 603 a 1 HETATM 14 C CBA HEA . . . N 13 125.028 148.383 129.861 1 53.46 ? CBA HEA 603 a 1 HETATM 15 C CGA HEA . . . N 13 123.596 148.494 130.304 1 53.46 ? CGA HEA 603 a 1 HETATM 16 O O1A HEA . . . N 13 123.238 149.459 130.933 1 53.46 ? O1A HEA 603 a 1 HETATM 17 O O2A HEA . . . N 13 122.685 147.649 129.808 1 53.46 ? O2A HEA 603 a 1 HETATM 18 N NB HEA . . . N 13 131.923 149.544 129.664 1 53.46 ? NB HEA 603 a 1 HETATM 19 C C1B HEA . . . N 13 131.322 150.747 129.544 1 53.46 ? C1B HEA 603 a 1 HETATM 20 C C2B HEA . . . N 13 132.331 151.791 129.559 1 53.46 ? C2B HEA 603 a 1 HETATM 21 C C3B HEA . . . N 13 133.53 151.186 129.729 1 53.46 ? C3B HEA 603 a 1 HETATM 22 C C4B HEA . . . N 13 133.25 149.765 129.834 1 53.46 ? C4B HEA 603 a 1 HETATM 23 C CMB HEA . . . N 13 132.102 153.27 129.412 1 53.46 ? CMB HEA 603 a 1 HETATM 24 N NC HEA . . . N 13 132.711 147.224 128.765 1 53.46 ? NC HEA 603 a 1 HETATM 25 C C1C HEA . . . N 13 133.982 147.721 129.024 1 53.46 ? C1C HEA 603 a 1 HETATM 26 C C2C HEA . . . N 13 134.864 147.136 128.145 1 53.46 ? C2C HEA 603 a 1 HETATM 27 C C3C HEA . . . N 13 134.156 146.234 127.361 1 53.46 ? C3C HEA 603 a 1 HETATM 28 C C4C HEA . . . N 13 132.804 146.277 127.748 1 53.46 ? C4C HEA 603 a 1 HETATM 29 C CMC HEA . . . N 13 136.342 147.411 128.057 1 53.46 ? CMC HEA 603 a 1 HETATM 30 C CAC HEA . . . N 13 134.756 145.385 126.324 1 53.46 ? CAC HEA 603 a 1 HETATM 31 C CBC HEA . . . N 13 134.697 144.064 126.439 1 53.46 ? CBC HEA 603 a 1 HETATM 32 N ND HEA . . . N 13 130.251 146.297 129.096 1 53.46 ? ND HEA 603 a 1 HETATM 33 C C1D HEA . . . N 13 130.562 145.425 128.105 1 53.46 ? C1D HEA 603 a 1 HETATM 34 C C2D HEA . . . N 13 129.517 144.404 128.04 1 53.46 ? C2D HEA 603 a 1 HETATM 35 C C3D HEA . . . N 13 128.624 144.678 129.023 1 53.46 ? C3D HEA 603 a 1 HETATM 36 C C4D HEA . . . N 13 129.138 145.841 129.708 1 53.46 ? C4D HEA 603 a 1 HETATM 37 C CMD HEA . . . N 13 129.412 143.245 127.09 1 53.46 ? CMD HEA 603 a 1 HETATM 38 C CAD HEA . . . N 13 127.369 143.926 129.401 1 53.46 ? CAD HEA 603 a 1 HETATM 39 C CBD HEA . . . N 13 126.406 143.679 128.242 1 53.46 ? CBD HEA 603 a 1 HETATM 40 C CGD HEA . . . N 13 125.346 142.721 128.727 1 53.46 ? CGD HEA 603 a 1 HETATM 41 O O1D HEA . . . N 13 125.41 142.271 129.844 1 53.46 ? O1D HEA 603 a 1 HETATM 42 O O2D HEA . . . N 13 124.304 142.391 127.948 1 53.46 ? O2D HEA 603 a 1 HETATM 43 C C11 HEA . . . N 13 134.866 151.878 129.789 1 53.46 ? C11 HEA 603 a 1 HETATM 44 O O11 HEA . . . N 13 135.837 151.071 130.455 1 53.46 ? O11 HEA 603 a 1 HETATM 45 C C12 HEA . . . N 13 135.319 152.126 128.353 1 53.46 ? C12 HEA 603 a 1 HETATM 46 C C13 HEA . . . N 13 136.391 153.214 128.321 1 53.46 ? C13 HEA 603 a 1 HETATM 47 C C14 HEA . . . N 13 136.689 153.565 126.888 1 53.46 ? C14 HEA 603 a 1 HETATM 48 C C15 HEA . . . N 13 136.808 154.815 126.52 1 53.46 ? C15 HEA 603 a 1 HETATM 49 C C16 HEA . . . N 13 137.53 155.154 125.244 1 53.46 ? C16 HEA 603 a 1 HETATM 50 C C17 HEA . . . N 13 138.603 156.196 125.551 1 53.46 ? C17 HEA 603 a 1 HETATM 51 C C18 HEA . . . N 13 139.115 156.823 124.282 1 53.46 ? C18 HEA 603 a 1 HETATM 52 C C19 HEA . . . N 13 139.692 157.996 124.344 1 53.46 ? C19 HEA 603 a 1 HETATM 53 C C20 HEA . . . N 13 139.708 158.728 125.657 1 53.46 ? C20 HEA 603 a 1 HETATM 54 C C21 HEA . . . N 13 139.233 160.165 125.447 1 53.46 ? C21 HEA 603 a 1 HETATM 55 C C22 HEA . . . N 13 138.637 160.691 126.728 1 53.46 ? C22 HEA 603 a 1 HETATM 56 C C23 HEA . . . N 13 137.336 160.712 126.884 1 53.46 ? C23 HEA 603 a 1 HETATM 57 C C24 HEA . . . N 13 136.719 161.667 127.871 1 53.46 ? C24 HEA 603 a 1 HETATM 58 C C25 HEA . . . N 13 136.455 160.017 125.88 1 53.46 ? C25 HEA 603 a 1 HETATM 59 C C26 HEA . . . N 13 136.408 155.917 127.465 1 53.46 ? C26 HEA 603 a 1 HETATM 60 C C27 HEA . . . N 13 140.052 158.724 123.076 1 53.46 ? C27 HEA 603 a 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 60 #