data_8UCP
#
_model_server_result.job_id            YIPUlXoq60wTPNwI7ORvRA 
_model_server_result.datetime_utc      '2024-10-10 11:24:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8ucp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":601}' 
#
_entry.id    8UCP 
#
_exptl.entry_id    8UCP 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              176.215 
_entity.id                          11 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            SEROTONIN 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8UCP 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8UCP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    decameric 
_pdbx_struct_assembly.oligomeric_count      10 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      11 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 B ND1 HIS 243 a HIS 243 1_555 L CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc2 B NE2 HIS 292 a HIS 292 1_555 L CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? 
metalc ? metalc3 B NE2 HIS 293 a HIS 293 1_555 L CU CU . a CU 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc4 B NE2 HIS 380 a HIS 380 1_555 M FE HEA . a HEA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? 
metalc ? metalc5 E SG CYS 82 d CYS 125 1_555 T ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? 
metalc ? metalc6 E ND1 HIS 90 d HIS 133 1_555 T ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
metalc ? metalc7 E SG CYS 105 d CYS 148 1_555 T ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc8 E SG CYS 108 d CYS 151 1_555 T ZN ZN . d ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? 
#
_chem_comp.formula           'C10 H12 N2 O' 
_chem_comp.formula_weight    176.215 
_chem_comp.id                SRO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              SEROTONIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3-(2-AMINOETHYL)-1H-INDOL-5-OL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH CZ3 SRO sing 541 n n 
OH HOH SRO sing 542 n n 
CZ3 CE3 SRO doub 543 n y 
CZ3 CH2 SRO sing 544 n y 
CH2 CZ2 SRO doub 545 n y 
CH2 HH2 SRO sing 546 n n 
CZ2 CE2 SRO sing 547 n y 
CZ2 HZ2 SRO sing 548 n n 
CE2 NE1 SRO sing 549 n y 
CE2 CD2 SRO doub 550 n y 
NE1 CD1 SRO sing 551 n y 
NE1 HNE1 SRO sing 552 n n 
CD1 CG SRO doub 553 n y 
CD1 HD1 SRO sing 554 n n 
CG CB SRO sing 555 n n 
CG CD2 SRO sing 556 n y 
CD2 CE3 SRO sing 557 n y 
CE3 HE3 SRO sing 558 n n 
CB CA SRO sing 559 n n 
CB HB1 SRO sing 560 n n 
CB HB2 SRO sing 561 n n 
CA NZ SRO sing 562 n n 
CA HA1 SRO sing 563 n n 
CA HA2 SRO sing 564 n n 
NZ HNZ1 SRO sing 565 n n 
NZ HNZ2 SRO sing 566 n n 
#
_atom_sites.entry_id                     8UCP 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 11 SRO A 1 601 501 SRO SRO . 
L 12 CU a 1 601 601 CU CU . 
M 13 HEA a 1 602 602 HEA HEA . 
N 13 HEA a 1 603 603 HEA HEA . 
O 14 PTY a 1 604 605 PTY PTY . 
P 14 PTY a 1 605 302 PTY PTY . 
Q 15 CUA b 1 301 301 CUA CUA . 
R 14 PTY b 1 302 303 PTY PTY . 
S 14 PTY c 1 301 301 PTY PTY . 
T 16 ZN d 1 201 201 ZN ZN . 
U 14 PTY e 1 201 604 PTY PTY . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH SRO . . . K 11 152.906 174.714 157.844 1 108.3 ? OH SRO 601 A 1 
HETATM 2 C CZ3 SRO . . . K 11 154.152 174.452 157.264 1 108.3 ? CZ3 SRO 601 A 1 
HETATM 3 C CH2 SRO . . . K 11 154.998 173.807 158.148 1 108.3 ? CH2 SRO 601 A 1 
HETATM 4 C CZ2 SRO . . . K 11 156.279 173.466 157.752 1 108.3 ? CZ2 SRO 601 A 1 
HETATM 5 C CE2 SRO . . . K 11 156.718 173.772 156.456 1 108.3 ? CE2 SRO 601 A 1 
HETATM 6 N NE1 SRO . . . K 11 157.912 173.551 155.82 1 108.3 ? NE1 SRO 601 A 1 
HETATM 7 C CD1 SRO . . . K 11 157.818 174.046 154.562 1 108.3 ? CD1 SRO 601 A 1 
HETATM 8 C CG SRO . . . K 11 156.558 174.58 154.412 1 108.3 ? CG SRO 601 A 1 
HETATM 9 C CD2 SRO . . . K 11 155.883 174.407 155.584 1 108.3 ? CD2 SRO 601 A 1 
HETATM 10 C CE3 SRO . . . K 11 154.585 174.754 155.986 1 108.3 ? CE3 SRO 601 A 1 
HETATM 11 C CB SRO . . . K 11 156.199 175.206 153.068 1 108.3 ? CB SRO 601 A 1 
HETATM 12 C CA SRO . . . K 11 155.551 176.574 153.27 1 108.3 ? CA SRO 601 A 1 
HETATM 13 N NZ SRO . . . K 11 155.611 177.32 152.027 1 108.3 ? NZ SRO 601 A 1 
HETATM 14 H HOH SRO . . . K 11 153.033 175.052 158.716 1 108.3 ? HOH SRO 601 A 1 
HETATM 15 H HH2 SRO . . . K 11 154.658 173.571 159.148 1 108.3 ? HH2 SRO 601 A 1 
HETATM 16 H HZ2 SRO . . . K 11 156.942 172.961 158.443 1 108.3 ? HZ2 SRO 601 A 1 
HETATM 17 H HNE1 SRO . . . K 11 158.714 173.101 156.217 1 108.3 ? HNE1 SRO 601 A 1 
HETATM 18 H HD1 SRO . . . K 11 158.595 174.025 153.809 1 108.3 ? HD1 SRO 601 A 1 
HETATM 19 H HE3 SRO . . . K 11 153.922 175.259 155.296 1 108.3 ? HE3 SRO 601 A 1 
HETATM 20 H HB1 SRO . . . K 11 155.512 174.554 152.538 1 108.3 ? HB1 SRO 601 A 1 
HETATM 21 H HB2 SRO . . . K 11 157.105 175.327 152.483 1 108.3 ? HB2 SRO 601 A 1 
HETATM 22 H HA1 SRO . . . K 11 156.082 177.117 154.045 1 108.3 ? HA1 SRO 601 A 1 
HETATM 23 H HA2 SRO . . . K 11 154.514 176.446 153.562 1 108.3 ? HA2 SRO 601 A 1 
HETATM 24 H HNZ1 SRO . . . K 11 154.696 177.364 151.617 1 108.3 ? HNZ1 SRO 601 A 1 
HETATM 25 H HNZ2 SRO . . . K 11 155.94 178.25 152.21 1 108.3 ? HNZ2 SRO 601 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           25 
#