data_8UFD # _model_server_result.job_id CRRSJd28pLP-96eSip1Lfg _model_server_result.datetime_utc '2024-10-10 07:23:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ufd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":603}' # _entry.id 8UFD # _exptl.entry_id 8UFD _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 403.316 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1S,3S)-N-[6-bromo-5-(pyrimidin-2-yl)pyridin-2-yl]-2,2-dimethyl-3-(2-methylpropyl)cyclopropane-1-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UFD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UFD _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # _chem_comp.formula 'C19 H23 Br N4 O' _chem_comp.formula_weight 403.316 _chem_comp.id WJI _chem_comp.mon_nstd_flag . _chem_comp.name (1S,3S)-N-[6-bromo-5-(pyrimidin-2-yl)pyridin-2-yl]-2,2-dimethyl-3-(2-methylpropyl)cyclopropane-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 WJI sing 503 n n C02 C04 WJI sing 504 n n C02 C03 WJI sing 505 n n C04 C05 WJI sing 506 n n C05 C06 WJI sing 507 n n C05 C23 WJI sing 508 n n N09 C10 WJI sing 509 n n N09 C07 WJI sing 510 n n C06 C07 WJI sing 511 n n C06 C23 WJI sing 512 n n N16 C10 WJI doub 513 n y N16 C14 WJI sing 514 n y BR15 C14 WJI sing 515 n n C10 C11 WJI sing 516 n y C07 O08 WJI doub 517 n n C14 C13 WJI doub 518 n y C23 C24 WJI sing 519 n n C23 C25 WJI sing 520 n n C11 C12 WJI doub 521 n y C13 C12 WJI sing 522 n y C13 C17 WJI sing 523 n n N18 C17 WJI doub 524 n y N18 C19 WJI sing 525 n y C17 N22 WJI sing 526 n y C19 C20 WJI doub 527 n y N22 C21 WJI doub 528 n y C20 C21 WJI sing 529 n y C20 H1 WJI sing 530 n n C21 H2 WJI sing 531 n n C24 H3 WJI sing 532 n n C24 H4 WJI sing 533 n n C24 H5 WJI sing 534 n n C01 H6 WJI sing 535 n n C01 H7 WJI sing 536 n n C01 H8 WJI sing 537 n n C02 H9 WJI sing 538 n n C03 H10 WJI sing 539 n n C03 H11 WJI sing 540 n n C03 H12 WJI sing 541 n n C04 H13 WJI sing 542 n n C04 H14 WJI sing 543 n n C05 H15 WJI sing 544 n n C06 H16 WJI sing 545 n n C11 H17 WJI sing 546 n n C12 H18 WJI sing 547 n n C19 H19 WJI sing 548 n n C25 H20 WJI sing 549 n n C25 H21 WJI sing 550 n n C25 H22 WJI sing 551 n n N09 H23 WJI sing 552 n n # _atom_sites.entry_id 8UFD _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PTY A 1 601 601 PTY PTY . D 2 PTY A 1 602 701 PTY PTY . E 3 WJI A 1 603 702 WJI LIG . F 2 PTY B 1 601 601 PTY PTY . G 2 PTY B 1 602 701 PTY PTY . H 3 WJI B 1 603 702 WJI LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 WJI . . . H 3 134.58 125.677 127.887 1 65.56 ? C10 WJI 603 B 1 HETATM 2 C C13 WJI . . . H 3 137.055 126.48 128.749 1 65.56 ? C13 WJI 603 B 1 HETATM 3 C C17 WJI . . . H 3 138.439 126.953 129.23 1 65.56 ? C17 WJI 603 B 1 HETATM 4 C C20 WJI . . . H 3 140.845 127.794 130.086 1 65.56 ? C20 WJI 603 B 1 HETATM 5 C C21 WJI . . . H 3 139.714 128.409 130.522 1 65.56 ? C21 WJI 603 B 1 HETATM 6 C C24 WJI . . . H 3 128.31 124.997 128.497 1 65.56 ? C24 WJI 603 B 1 HETATM 7 C C01 WJI . . . H 3 128.062 121.776 124.89 1 65.56 ? C01 WJI 603 B 1 HETATM 8 C C02 WJI . . . H 3 129.02 122.541 125.839 1 65.56 ? C02 WJI 603 B 1 HETATM 9 C C03 WJI . . . H 3 129.574 121.271 126.536 1 65.56 ? C03 WJI 603 B 1 HETATM 10 C C04 WJI . . . H 3 129.279 123.846 126 1 65.56 ? C04 WJI 603 B 1 HETATM 11 C C05 WJI . . . H 3 130.343 124.076 127.105 1 65.56 ? C05 WJI 603 B 1 HETATM 12 C C06 WJI . . . H 3 130.628 125.547 127.483 1 65.56 ? C06 WJI 603 B 1 HETATM 13 C C07 WJI . . . H 3 132.057 125.928 127.958 1 65.56 ? C07 WJI 603 B 1 HETATM 14 C C11 WJI . . . H 3 135.416 124.788 128.561 1 65.56 ? C11 WJI 603 B 1 HETATM 15 C C12 WJI . . . H 3 136.643 125.203 128.99 1 65.56 ? C12 WJI 603 B 1 HETATM 16 C C14 WJI . . . H 3 136.217 127.362 128.072 1 65.56 ? C14 WJI 603 B 1 HETATM 17 C C19 WJI . . . H 3 140.756 126.748 129.215 1 65.56 ? C19 WJI 603 B 1 HETATM 18 C C23 WJI . . . H 3 129.812 124.647 128.435 1 65.56 ? C23 WJI 603 B 1 HETATM 19 C C25 WJI . . . H 3 130.537 124.086 129.673 1 65.56 ? C25 WJI 603 B 1 HETATM 20 N N09 WJI . . . H 3 133.251 125.264 127.417 1 65.56 ? N09 WJI 603 B 1 HETATM 21 N N16 WJI . . . H 3 134.994 126.948 127.651 1 65.56 ? N16 WJI 603 B 1 HETATM 22 N N18 WJI . . . H 3 139.565 126.333 128.793 1 65.56 ? N18 WJI 603 B 1 HETATM 23 N N22 WJI . . . H 3 138.531 127.989 130.099 1 65.56 ? N22 WJI 603 B 1 HETATM 24 O O08 WJI . . . H 3 132.192 126.79 128.762 1 65.56 ? O08 WJI 603 B 1 HETATM 25 BR BR15 WJI . . . H 3 136.786 129.186 127.723 1 65.56 ? BR15 WJI 603 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 25 #