data_8UGT # _model_server_result.job_id w5jF13NOskWuNcX6WTosQA _model_server_result.datetime_utc '2024-10-10 13:28:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ugt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 8UGT # _exptl.entry_id 8UGT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 355.461 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-methyl-8-(piperazin-1-yl)-1,2,3,4-tetrahydro[1,2,3]triazino[4',5':4,5]thieno[2,3-c]isoquinolin-5-amine" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8UGT _cell.length_a 179.938 _cell.length_b 179.938 _cell.length_c 132.792 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UGT _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall 'P 64 2 (x,y,z+1/6)' _symmetry.space_group_name_H-M 'P 64 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_545 -x,-y-1,z -1 0 0 0 -1 0 0 0 1 89.969 -155.830879 0 3 'crystal symmetry operation' 9_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -44.264 4 'crystal symmetry operation' 12_544 x,x-y-1,-z-1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 89.969 -155.830879 -44.264 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N7 S' _chem_comp.formula_weight 355.461 _chem_comp.id WR8 _chem_comp.mon_nstd_flag . _chem_comp.name "N-methyl-8-(piperazin-1-yl)-1,2,3,4-tetrahydro[1,2,3]triazino[4',5':4,5]thieno[2,3-c]isoquinolin-5-amine" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N02 C01 WR8 sing 458 n n C03 N02 WR8 sing 459 n n C04 C03 WR8 doub 460 n y C06 C05 WR8 sing 461 n n C07 C06 WR8 sing 462 n n C08 C07 WR8 sing 463 n n C05 C04 WR8 sing 464 n n C09 C04 WR8 sing 465 n y C10 C09 WR8 doub 466 n y C12 C11 WR8 doub 467 n y S13 C12 WR8 sing 468 n y C14 C12 WR8 sing 469 n y C16 N15 WR8 sing 470 n n C17 C16 WR8 sing 471 n n N18 C17 WR8 sing 472 n n C19 N18 WR8 sing 473 n n C20 C19 WR8 sing 474 n n N15 C14 WR8 sing 475 n n N21 C14 WR8 doub 476 n y N22 N21 WR8 sing 477 n y N23 N22 WR8 doub 478 n y C11 C10 WR8 sing 479 n y C24 C10 WR8 sing 480 n y N25 C24 WR8 doub 481 n y C03 N25 WR8 sing 482 n y C08 C09 WR8 sing 483 n n C11 N23 WR8 sing 484 n y S13 C24 WR8 sing 485 n y N15 C20 WR8 sing 486 n n C01 H011 WR8 sing 487 n n C01 H012 WR8 sing 488 n n C01 H013 WR8 sing 489 n n C05 H052 WR8 sing 490 n n C05 H051 WR8 sing 491 n n C06 H062 WR8 sing 492 n n C06 H061 WR8 sing 493 n n C07 H071 WR8 sing 494 n n C07 H072 WR8 sing 495 n n C08 H081 WR8 sing 496 n n C08 H082 WR8 sing 497 n n C16 H161 WR8 sing 498 n n C16 H162 WR8 sing 499 n n C17 H171 WR8 sing 500 n n C17 H172 WR8 sing 501 n n C19 H191 WR8 sing 502 n n C19 H192 WR8 sing 503 n n C20 H202 WR8 sing 504 n n C20 H201 WR8 sing 505 n n N02 H021 WR8 sing 506 n n N18 H181 WR8 sing 507 n n # _atom_sites.entry_id 8UGT _atom_sites.fract_transf_matrix[1][1] 0.005557 _atom_sites.fract_transf_matrix[1][2] 0.003209 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006417 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007531 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WOF A 1 701 714 WOF 81G . C 3 WR8 A 1 702 715 WR8 I81 . D 4 GOL A 1 703 716 GOL GOL . E 4 GOL A 1 704 717 GOL GOL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 WR8 . . . C 3 16.47 -86.391 -14.773 0.79 64.02 ? C10 WR8 702 A 1 HETATM 2 C C11 WR8 . . . C 3 15.961 -86.433 -16.155 0.79 63.68 ? C11 WR8 702 A 1 HETATM 3 C C12 WR8 . . . C 3 14.861 -85.585 -16.371 0.79 64.8 ? C12 WR8 702 A 1 HETATM 4 C C14 WR8 . . . C 3 14.306 -85.559 -17.682 0.79 64.14 ? C14 WR8 702 A 1 HETATM 5 C C01 WR8 . . . C 3 17.024 -86.867 -9.757 0.79 62.22 ? C01 WR8 702 A 1 HETATM 6 C C03 WR8 . . . C 3 17.174 -86.086 -12.118 0.79 63.4 ? C03 WR8 702 A 1 HETATM 7 C C04 WR8 . . . C 3 17.902 -86.983 -12.96 0.79 64.04 ? C04 WR8 702 A 1 HETATM 8 C C05 WR8 . . . C 3 19.06 -87.745 -12.343 0.79 65.16 ? C05 WR8 702 A 1 HETATM 9 C C06 WR8 . . . C 3 19.296 -89.042 -13.068 0.79 68.58 ? C06 WR8 702 A 1 HETATM 10 C C07 WR8 . . . C 3 19.551 -88.786 -14.544 0.79 62.62 ? C07 WR8 702 A 1 HETATM 11 C C08 WR8 . . . C 3 18.344 -88.108 -15.215 0.79 61.34 ? C08 WR8 702 A 1 HETATM 12 C C09 WR8 . . . C 3 17.574 -87.147 -14.273 0.79 62.98 ? C09 WR8 702 A 1 HETATM 13 C C16 WR8 . . . C 3 12.785 -83.612 -17.059 0.79 66.54 ? C16 WR8 702 A 1 HETATM 14 C C17 WR8 . . . C 3 11.924 -82.651 -17.668 0.79 71.22 ? C17 WR8 702 A 1 HETATM 15 C C19 WR8 . . . C 3 10.913 -84.251 -19.057 0.79 78.23 ? C19 WR8 702 A 1 HETATM 16 C C20 WR8 . . . C 3 11.919 -85.298 -18.64 0.79 72.53 ? C20 WR8 702 A 1 HETATM 17 C C24 WR8 . . . C 3 15.802 -85.539 -13.907 0.79 64.97 ? C24 WR8 702 A 1 HETATM 18 N N02 WR8 . . . C 3 17.518 -85.913 -10.726 0.79 60.08 ? N02 WR8 702 A 1 HETATM 19 N N15 WR8 . . . C 3 13.182 -84.709 -17.976 0.79 67.83 ? N15 WR8 702 A 1 HETATM 20 N N18 WR8 . . . C 3 10.696 -83.321 -18.037 0.79 79.13 ? N18 WR8 702 A 1 HETATM 21 N N21 WR8 . . . C 3 14.838 -86.322 -18.623 0.79 63.27 ? N21 WR8 702 A 1 HETATM 22 N N22 WR8 . . . C 3 15.874 -87.1 -18.359 0.79 63.71 ? N22 WR8 702 A 1 HETATM 23 N N23 WR8 . . . C 3 16.429 -87.167 -17.175 0.79 61.99 ? N23 WR8 702 A 1 HETATM 24 N N25 WR8 . . . C 3 16.16 -85.411 -12.633 0.79 63.16 ? N25 WR8 702 A 1 HETATM 25 S S13 WR8 . . . C 3 14.566 -84.836 -14.877 0.79 88.8 ? S13 WR8 702 A 1 HETATM 26 H H011 WR8 . . . C 3 17.858 -87.257 -9.18 0.79 74.66 ? H011 WR8 702 A 1 HETATM 27 H H012 WR8 . . . C 3 16.535 -87.682 -10.282 0.79 74.66 ? H012 WR8 702 A 1 HETATM 28 H H013 WR8 . . . C 3 16.313 -86.379 -9.094 0.79 74.66 ? H013 WR8 702 A 1 HETATM 29 H H052 WR8 . . . C 3 19.952 -87.132 -12.411 0.79 78.2 ? H052 WR8 702 A 1 HETATM 30 H H051 WR8 . . . C 3 18.846 -87.969 -11.307 0.79 78.2 ? H051 WR8 702 A 1 HETATM 31 H H062 WR8 . . . C 3 18.414 -89.664 -12.966 0.79 82.29 ? H062 WR8 702 A 1 HETATM 32 H H061 WR8 . . . C 3 20.154 -89.542 -12.636 0.79 82.29 ? H061 WR8 702 A 1 HETATM 33 H H071 WR8 . . . C 3 19.751 -89.729 -15.039 0.79 75.14 ? H071 WR8 702 A 1 HETATM 34 H H072 WR8 . . . C 3 20.41 -88.13 -14.639 0.79 75.14 ? H072 WR8 702 A 1 HETATM 35 H H081 WR8 . . . C 3 17.659 -88.877 -15.554 0.79 73.61 ? H081 WR8 702 A 1 HETATM 36 H H082 WR8 . . . C 3 18.702 -87.54 -16.067 0.79 73.61 ? H082 WR8 702 A 1 HETATM 37 H H161 WR8 . . . C 3 13.677 -83.088 -16.73 0.79 79.85 ? H161 WR8 702 A 1 HETATM 38 H H162 WR8 . . . C 3 12.272 -84.038 -16.206 0.79 79.85 ? H162 WR8 702 A 1 HETATM 39 H H171 WR8 . . . C 3 12.405 -82.252 -18.554 0.79 85.47 ? H171 WR8 702 A 1 HETATM 40 H H172 WR8 . . . C 3 11.714 -81.855 -16.962 0.79 85.47 ? H172 WR8 702 A 1 HETATM 41 H H191 WR8 . . . C 3 11.302 -83.73 -19.924 0.79 93.88 ? H191 WR8 702 A 1 HETATM 42 H H192 WR8 . . . C 3 9.977 -84.736 -19.309 0.79 93.88 ? H192 WR8 702 A 1 HETATM 43 H H202 WR8 . . . C 3 12.221 -85.857 -19.518 0.79 87.03 ? H202 WR8 702 A 1 HETATM 44 H H201 WR8 . . . C 3 11.448 -85.97 -17.932 0.79 87.03 ? H201 WR8 702 A 1 HETATM 45 H H021 WR8 . . . C 3 18.088 -85.143 -10.438 0.79 72.09 ? H021 WR8 702 A 1 HETATM 46 H H181 WR8 . . . C 3 10.032 -82.639 -18.348 0.79 94.96 ? H181 WR8 702 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 46 #