data_8UGY # _model_server_result.job_id vj5whYi9D1P9B8r49sbBSw _model_server_result.datetime_utc '2024-10-11 00:25:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ugy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":406}' # _entry.id 8UGY # _exptl.entry_id 8UGY _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 264.365 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Mianserin _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UGY _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UGY _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 139 B CYS 121 1_555 B SG CYS 167 B CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf2 D SG CYS 76 R CYS 95 1_555 D SG CYS 154 R CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C18 H20 N2' _chem_comp.formula_weight 264.365 _chem_comp.id WRU _chem_comp.mon_nstd_flag . _chem_comp.name Mianserin _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C4 WRU doub 453 n y C5 C6 WRU sing 454 n y C4 C3 WRU sing 455 n y C6 C7 WRU doub 456 n y C3 C2 WRU sing 457 n n C3 C8 WRU doub 458 n y C2 C18 WRU sing 459 n n C7 C8 WRU sing 460 n y C8 C9 WRU sing 461 n n C18 C17 WRU doub 462 n y C18 C13 WRU sing 463 n y C1 C9 WRU sing 464 n n C1 N1 WRU sing 465 n n C17 C16 WRU sing 466 n y C9 N2 WRU sing 467 n n C10 N1 WRU sing 468 n n N2 C13 WRU sing 469 n n N2 C12 WRU sing 470 n n C13 C14 WRU doub 471 n y N1 C11 WRU sing 472 n n C16 C15 WRU doub 473 n y C11 C12 WRU sing 474 n n C14 C15 WRU sing 475 n y C5 H1 WRU sing 476 n n C6 H2 WRU sing 477 n n C2 H4 WRU sing 478 n n C2 H5 WRU sing 479 n n C4 H6 WRU sing 480 n n C11 H7 WRU sing 481 n n C11 H8 WRU sing 482 n n C12 H9 WRU sing 483 n n C12 H10 WRU sing 484 n n C14 H11 WRU sing 485 n n C15 H12 WRU sing 486 n n C16 H13 WRU sing 487 n n C1 H14 WRU sing 488 n n C1 H15 WRU sing 489 n n C7 H16 WRU sing 490 n n C9 H17 WRU sing 491 n n C10 H18 WRU sing 492 n n C10 H19 WRU sing 493 n n C10 H20 WRU sing 494 n n C17 H21 WRU sing 495 n n # _atom_sites.entry_id 8UGY _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 CLR R 1 401 403 CLR CLR . F 5 CLR R 1 402 404 CLR CLR . G 5 CLR R 1 403 408 CLR CLR . H 5 CLR R 1 404 409 CLR CLR . I 5 CLR R 1 405 411 CLR CLR . J 6 WRU R 1 406 412 WRU WRU . K 7 HOH R 1 501 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 WRU . . . J 6 135.882 135.666 107.075 1 51.43 ? C8 WRU 406 R 1 HETATM 2 C C5 WRU . . . J 6 134.608 135.023 104.688 1 51.43 ? C5 WRU 406 R 1 HETATM 3 C C6 WRU . . . J 6 134.969 134.026 105.559 1 51.43 ? C6 WRU 406 R 1 HETATM 4 N N1 WRU . . . J 6 138.589 134.88 109.471 1 51.43 ? N1 WRU 406 R 1 HETATM 5 C C2 WRU . . . J 6 135.812 138.131 106.482 1 51.43 ? C2 WRU 406 R 1 HETATM 6 C C4 WRU . . . J 6 134.871 136.345 105 1 51.43 ? C4 WRU 406 R 1 HETATM 7 C C11 WRU . . . J 6 137.981 135.685 110.528 1 51.43 ? C11 WRU 406 R 1 HETATM 8 C C12 WRU . . . J 6 137.811 137.125 110.085 1 51.43 ? C12 WRU 406 R 1 HETATM 9 C C13 WRU . . . J 6 135.843 138.157 108.993 1 51.43 ? C13 WRU 406 R 1 HETATM 10 C C14 WRU . . . J 6 135.385 138.617 110.223 1 51.43 ? C14 WRU 406 R 1 HETATM 11 C C15 WRU . . . J 6 134.343 139.528 110.263 1 51.43 ? C15 WRU 406 R 1 HETATM 12 C C16 WRU . . . J 6 133.763 139.975 109.097 1 51.43 ? C16 WRU 406 R 1 HETATM 13 C C1 WRU . . . J 6 137.892 135.102 108.204 1 51.43 ? C1 WRU 406 R 1 HETATM 14 N N2 WRU . . . J 6 136.909 137.22 108.935 1 51.43 ? N2 WRU 406 R 1 HETATM 15 C C3 WRU . . . J 6 135.511 136.684 106.19 1 51.43 ? C3 WRU 406 R 1 HETATM 16 C C7 WRU . . . J 6 135.602 134.341 106.747 1 51.43 ? C7 WRU 406 R 1 HETATM 17 C C9 WRU . . . J 6 136.596 135.882 108.399 1 51.43 ? C9 WRU 406 R 1 HETATM 18 C C10 WRU . . . J 6 140.008 135.187 109.341 1 51.43 ? C10 WRU 406 R 1 HETATM 19 C C17 WRU . . . J 6 134.218 139.519 107.873 1 51.43 ? C17 WRU 406 R 1 HETATM 20 C C18 WRU . . . J 6 135.267 138.607 107.803 1 51.43 ? C18 WRU 406 R 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #