data_8UHE # _model_server_result.job_id HhR8ZeJdT5f7zE0EnYLYqA _model_server_result.datetime_utc '2025-03-06 09:52:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uhe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Z","auth_seq_id":201}' # _entry.id 8UHE # _exptl.entry_id 8UHE _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 588.694 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHYCOCYANOBILIN _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UHE _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UHE _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 19-meric _pdbx_struct_assembly.oligomeric_count 19 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 T N N ? 8 U N N ? 8 W N N ? 8 X N N ? 8 Y N N ? 8 Z N N ? 8 AA N N ? 8 BA N N ? 8 CA N N ? 8 FA N N ? 8 GA N N ? 8 HA N N ? 8 IA N N ? 8 JA N N ? 8 KA N N ? 8 LA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 78 A CYS 78 1_555 T CAC CYC . A CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? covale ? covale2 B C GLY 70 B GLY 70 1_555 B N MEN 71 B MEN 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale3 B C MEN 71 B MEN 71 1_555 B N MET 72 B MET 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 B SG CYS 81 B CYS 81 1_555 U CAC CYC . B CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? covale ? covale5 D C GLY 70 D GLY 70 1_555 D N MEN 71 D MEN 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale6 D C MEN 71 D MEN 71 1_555 D N MET 72 D MET 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale7 D SG CYS 81 D CYS 81 1_555 W CAC CYC . D CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? covale ? covale8 E SG CYS 78 E CYS 78 1_555 X CAC CYC . E CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? covale ? covale9 F C GLY 70 F GLY 70 1_555 F N MEN 71 F MEN 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale10 F C MEN 71 F MEN 71 1_555 F N MET 72 F MET 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 F SG CYS 81 F CYS 81 1_555 Y CAC CYC . F CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale12 G SG CYS 78 G CYS 78 1_555 Z CAC CYC . G CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.813 ? covale ? covale13 H C GLY 70 H GLY 70 1_555 H N MEN 71 H MEN 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale14 H C MEN 71 H MEN 71 1_555 H N MET 72 H MET 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 H SG CYS 81 H CYS 81 1_555 AA CAC CYC . H CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale16 I SG CYS 78 I CYS 78 1_555 BA CAC CYC . I CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? covale ? covale17 J C GLY 71 J GLY 71 1_555 J N MEN 72 J MEN 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale18 J C MEN 72 J MEN 72 1_555 J N ALA 73 J ALA 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale19 J SG CYS 82 J CYS 82 1_555 CA CAC CYC . J CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.821 ? covale ? covale20 L C GLY 70 L GLY 70 1_555 L N MEN 71 L MEN 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale21 L C MEN 71 L MEN 71 1_555 L N MET 72 L MET 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale22 L SG CYS 81 L CYS 81 1_555 FA CAC CYC . L CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.788 ? covale ? covale23 M SG CYS 78 M CYS 78 1_555 GA CAC CYC . M CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale24 N C GLY 70 N GLY 70 1_555 N N MEN 71 N MEN 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale25 N C MEN 71 N MEN 71 1_555 N N MET 72 N MET 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale26 N SG CYS 81 N CYS 81 1_555 HA CAC CYC . N CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale27 O SG CYS 78 O CYS 78 1_555 IA CAC CYC . O CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale28 P C GLY 70 P GLY 70 1_555 P N MEN 71 P MEN 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale29 P C MEN 71 P MEN 71 1_555 P N MET 72 P MET 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale30 P SG CYS 81 P CYS 81 1_555 JA CAC CYC . P CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.754 ? covale ? covale31 Q SG CYS 78 Q CYS 78 1_555 KA CAC CYC . Q CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.818 ? covale ? covale32 R C GLY 70 R GLY 70 1_555 R N MEN 71 R MEN 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale33 R C MEN 71 R MEN 71 1_555 R N MET 72 R MET 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale34 R SG CYS 81 R CYS 81 1_555 LA CAC CYC . R CYC 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.813 ? # _chem_comp.formula 'C33 H40 N4 O6' _chem_comp.formula_weight 588.694 _chem_comp.id CYC _chem_comp.mon_nstd_flag . _chem_comp.name PHYCOCYANOBILIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A CYC doub 70 z n CHA C4D CYC sing 71 n n CHA HHA CYC sing 72 n n NA C1A CYC sing 73 n n NA C4A CYC doub 74 n n C1A C2A CYC sing 75 n n C2A C3A CYC doub 76 n n C2A CAA CYC sing 77 n n C3A C4A CYC sing 78 n n C3A CMA CYC sing 79 n n C4A CHB CYC sing 80 n n CMA HMA1 CYC sing 81 n n CMA HMA2 CYC sing 82 n n CMA HMA3 CYC sing 83 n n CAA CBA CYC sing 84 n n CAA HAA1 CYC sing 85 n n CAA HAA2 CYC sing 86 n n CBA CGA CYC sing 87 n n CBA HBA1 CYC sing 88 n n CBA HBA2 CYC sing 89 n n CGA O1A CYC doub 90 n n CGA O2A CYC sing 91 n n O2A H2A CYC sing 92 n n CHB C1B CYC doub 93 z n CHB HHB CYC sing 94 n n NB C1B CYC sing 95 n n NB C4B CYC sing 96 n n NB HB CYC sing 97 n n C1B C2B CYC sing 98 n n C2B C3B CYC doub 99 n n C2B CMB CYC sing 100 n n C3B C4B CYC sing 101 n n C3B CAB CYC sing 102 n n C4B OB CYC doub 103 n n CMB HMB1 CYC sing 104 n n CMB HMB2 CYC sing 105 n n CMB HMB3 CYC sing 106 n n CAB CBB CYC sing 107 n n CAB HAB1 CYC sing 108 n n CAB HAB2 CYC sing 109 n n CBB HBB1 CYC sing 110 n n CBB HBB2 CYC sing 111 n n CBB HBB3 CYC sing 112 n n NC C1C CYC sing 113 n n NC C4C CYC sing 114 n n NC HC CYC sing 115 n n C1C C2C CYC sing 116 n n C1C OC CYC doub 117 n n C2C C3C CYC sing 118 n n C2C CMC CYC sing 119 n n C2C H2C CYC sing 120 n n C3C C4C CYC sing 121 n n C3C CAC CYC sing 122 n n C3C H3C CYC sing 123 n n C4C CHD CYC doub 124 z n CMC HMC1 CYC sing 125 n n CMC HMC2 CYC sing 126 n n CMC HMC3 CYC sing 127 n n CAC CBC CYC sing 128 n n CAC HAC1 CYC sing 129 n n CAC HAC2 CYC sing 130 n n CBC HBC1 CYC sing 131 n n CBC HBC2 CYC sing 132 n n CBC HBC3 CYC sing 133 n n CHD C1D CYC sing 134 n n CHD HHD CYC sing 135 n n ND C1D CYC sing 136 n y ND C4D CYC sing 137 n y ND HD CYC sing 138 n n C1D C2D CYC doub 139 n y C2D C3D CYC sing 140 n y C2D CMD CYC sing 141 n n C3D C4D CYC doub 142 n y C3D CAD CYC sing 143 n n CMD HMD1 CYC sing 144 n n CMD HMD2 CYC sing 145 n n CMD HMD3 CYC sing 146 n n CAD CBD CYC sing 147 n n CAD HAD1 CYC sing 148 n n CAD HAD2 CYC sing 149 n n CBD CGD CYC sing 150 n n CBD HBD1 CYC sing 151 n n CBD HBD2 CYC sing 152 n n CGD O1D CYC doub 153 n n CGD O2D CYC sing 154 n n O2D H2D CYC sing 155 n n # _atom_sites.entry_id 8UHE _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code T 8 CYC A 1 201 201 CYC CYC . U 8 CYC B 1 201 176 CYC CYC . V 9 M1V C 1 201 201 M1V CY2 . W 8 CYC D 1 201 176 CYC CYC . X 8 CYC E 1 201 201 CYC CYC . Y 8 CYC F 1 201 176 CYC CYC . Z 8 CYC G 1 201 201 CYC CYC . AA 8 CYC H 1 201 176 CYC CYC . BA 8 CYC I 1 201 201 CYC CYC . CA 8 CYC J 1 201 201 CYC CYC . DA 9 M1V K 1 801 902 M1V CY2 . EA 10 CL K 1 802 903 CL CL . FA 8 CYC L 1 201 176 CYC CYC . GA 8 CYC M 1 201 201 CYC CYC . HA 8 CYC N 1 201 176 CYC CYC . IA 8 CYC O 1 201 201 CYC CYC . JA 8 CYC P 1 201 176 CYC CYC . KA 8 CYC Q 1 201 201 CYC CYC . LA 8 CYC R 1 201 176 CYC CYC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA CYC . . . Z 8 144.193 98.1 107.881 1 26.75 ? CHA CYC 201 G 1 HETATM 2 N NA CYC . . . Z 8 142.813 99.022 106.084 1 24.82 ? NA CYC 201 G 1 HETATM 3 C C1A CYC . . . Z 8 143.039 98.175 107.153 1 22.85 ? C1A CYC 201 G 1 HETATM 4 C C2A CYC . . . Z 8 141.829 97.443 107.481 1 29.6 ? C2A CYC 201 G 1 HETATM 5 C C3A CYC . . . Z 8 140.859 97.891 106.626 1 31.96 ? C3A CYC 201 G 1 HETATM 6 C C4A CYC . . . Z 8 141.513 98.851 105.735 1 25.92 ? C4A CYC 201 G 1 HETATM 7 C CMA CYC . . . Z 8 139.397 97.559 106.665 1 30.84 ? CMA CYC 201 G 1 HETATM 8 C CAA CYC . . . Z 8 141.711 96.365 108.521 1 32.65 ? CAA CYC 201 G 1 HETATM 9 C CBA CYC . . . Z 8 142.226 95.025 108.031 1 26.17 ? CBA CYC 201 G 1 HETATM 10 C CGA CYC . . . Z 8 141.199 94.227 107.282 1 29.47 ? CGA CYC 201 G 1 HETATM 11 O O1A CYC . . . Z 8 141.077 94.258 106.074 1 33.45 ? O1A CYC 201 G 1 HETATM 12 O O2A CYC . . . Z 8 140.459 93.488 108.066 1 26.15 ? O2A CYC 201 G 1 HETATM 13 C CHB CYC . . . Z 8 140.962 99.486 104.582 1 31.04 ? CHB CYC 201 G 1 HETATM 14 N NB CYC . . . Z 8 138.908 98.459 103.688 1 27.09 ? NB CYC 201 G 1 HETATM 15 C C1B CYC . . . Z 8 139.881 99.427 103.737 1 31.7 ? C1B CYC 201 G 1 HETATM 16 C C2B CYC . . . Z 8 139.536 100.415 102.728 1 28.12 ? C2B CYC 201 G 1 HETATM 17 C C3B CYC . . . Z 8 138.377 100.019 102.116 1 30.36 ? C3B CYC 201 G 1 HETATM 18 C C4B CYC . . . Z 8 137.969 98.756 102.736 1 34.91 ? C4B CYC 201 G 1 HETATM 19 C CMB CYC . . . Z 8 140.371 101.618 102.409 1 30.35 ? CMB CYC 201 G 1 HETATM 20 C CAB CYC . . . Z 8 137.779 100.507 100.826 1 23.03 ? CAB CYC 201 G 1 HETATM 21 C CBB CYC . . . Z 8 138.483 99.971 99.599 1 29.36 ? CBB CYC 201 G 1 HETATM 22 O OB CYC . . . Z 8 136.96 98.1 102.512 1 32.55 ? OB CYC 201 G 1 HETATM 23 N NC CYC . . . Z 8 149.308 102.526 107.405 1 31 ? NC CYC 201 G 1 HETATM 24 C C1C CYC . . . Z 8 150.123 103.617 107.248 1 32.39 ? C1C CYC 201 G 1 HETATM 25 C C2C CYC . . . Z 8 149.776 104.282 105.935 1 32.23 ? C2C CYC 201 G 1 HETATM 26 C C3C CYC . . . Z 8 148.643 103.399 105.355 1 29.19 ? C3C CYC 201 G 1 HETATM 27 C C4C CYC . . . Z 8 148.434 102.307 106.37 1 27.98 ? C4C CYC 201 G 1 HETATM 28 C CMC CYC . . . Z 8 149.456 105.761 106.122 1 28.62 ? CMC CYC 201 G 1 HETATM 29 C CAC CYC . . . Z 8 148.883 102.839 103.944 1 28.18 ? CAC CYC 201 G 1 HETATM 30 C CBC CYC . . . Z 8 148.751 103.879 102.857 1 29.32 ? CBC CYC 201 G 1 HETATM 31 O OC CYC . . . Z 8 150.996 103.966 108.033 1 33.75 ? OC CYC 201 G 1 HETATM 32 C CHD CYC . . . Z 8 147.554 101.261 106.244 1 30.96 ? CHD CYC 201 G 1 HETATM 33 N ND CYC . . . Z 8 145.69 99.773 106.831 1 28.59 ? ND CYC 201 G 1 HETATM 34 C C1D CYC . . . Z 8 146.956 100.263 107.052 1 31 ? C1D CYC 201 G 1 HETATM 35 C C2D CYC . . . Z 8 147.476 99.583 108.185 1 27.15 ? C2D CYC 201 G 1 HETATM 36 C C3D CYC . . . Z 8 146.496 98.709 108.64 1 30.99 ? C3D CYC 201 G 1 HETATM 37 C C4D CYC . . . Z 8 145.385 98.823 107.775 1 28.52 ? C4D CYC 201 G 1 HETATM 38 C CMD CYC . . . Z 8 148.845 99.724 108.779 1 29.71 ? CMD CYC 201 G 1 HETATM 39 C CAD CYC . . . Z 8 146.594 97.855 109.874 1 30.92 ? CAD CYC 201 G 1 HETATM 40 C CBD CYC . . . Z 8 146.072 98.563 111.112 1 29.72 ? CBD CYC 201 G 1 HETATM 41 C CGD CYC . . . Z 8 146.074 97.706 112.345 1 34.27 ? CGD CYC 201 G 1 HETATM 42 O O1D CYC . . . Z 8 145.867 98.148 113.456 1 30.15 ? O1D CYC 201 G 1 HETATM 43 O O2D CYC . . . Z 8 146.316 96.443 112.106 1 39.3 ? O2D CYC 201 G 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 43 #