data_8UHV # _model_server_result.job_id uVsmuwEfJDAb3knO75d7Lw _model_server_result.datetime_utc '2024-10-16 23:26:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uhv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 8UHV # _exptl.entry_id 8UHV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UHV _cell.length_a 60.238 _cell.length_b 67.281 _cell.length_c 164.39 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UHV _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (z,x,y)' _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 96 A CYS 168 1_555 A SG CYS 337 A CYS 409 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 250 A CYS 322 1_555 A SG CYS 334 A CYS 406 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.016 ? disulf ? disulf3 A SG CYS 250 A CYS 322 1_555 A SG CYS 334 A CYS 406 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.046 ? disulf ? disulf4 A SG CYS 328 A CYS 400 1_555 A SG CYS 404 A CYS 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf5 A SG CYS 440 A CYS 512 1_555 A SG CYS 458 A CYS 530 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 A SG CYS 484 A CYS 556 1_555 A SG CYS 494 A CYS 566 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 A SG CYS 518 A CYS 590 1_555 A SG CYS 531 A CYS 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 8UHV _atom_sites.fract_transf_matrix[1][1] 0.016601 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014863 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006083 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 701 706 GOL GOL . C 2 GOL A 1 702 707 GOL GOL . D 2 GOL A 1 703 709 GOL GOL . E 2 GOL A 1 704 710 GOL GOL . F 2 GOL A 1 705 711 GOL GOL . G 2 GOL A 1 706 712 GOL GOL . H 3 PEG A 1 707 714 PEG PEG . I 2 GOL A 1 708 715 GOL GOL . J 3 PEG A 1 709 716 PEG PEG . K 4 HOH A 1 801 6 HOH HOH . K 4 HOH A 2 802 701 HOH HOH . K 4 HOH A 3 803 5 HOH HOH . K 4 HOH A 4 804 8 HOH HOH . K 4 HOH A 5 805 26 HOH HOH . K 4 HOH A 6 806 17 HOH HOH . K 4 HOH A 7 807 11 HOH HOH . K 4 HOH A 8 808 31 HOH HOH . K 4 HOH A 9 809 4 HOH HOH . K 4 HOH A 10 810 27 HOH HOH . K 4 HOH A 11 811 19 HOH HOH . K 4 HOH A 12 812 24 HOH HOH . K 4 HOH A 13 813 21 HOH HOH . K 4 HOH A 14 814 14 HOH HOH . K 4 HOH A 15 815 7 HOH HOH . K 4 HOH A 16 816 25 HOH HOH . K 4 HOH A 17 817 23 HOH HOH . K 4 HOH A 18 818 13 HOH HOH . K 4 HOH A 19 819 18 HOH HOH . K 4 HOH A 20 820 22 HOH HOH . K 4 HOH A 21 821 10 HOH HOH . K 4 HOH A 22 822 16 HOH HOH . K 4 HOH A 23 823 703 HOH HOH . K 4 HOH A 24 824 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 12.603 14.081 54.318 1 64.81 ? C1 GOL 701 A 1 HETATM 2 O O1 GOL . . . B 2 13.891 13.984 53.792 1 58.98 ? O1 GOL 701 A 1 HETATM 3 C C2 GOL . . . B 2 12.677 15.077 55.498 1 73.23 ? C2 GOL 701 A 1 HETATM 4 O O2 GOL . . . B 2 12.893 16.381 55.069 1 69.66 ? O2 GOL 701 A 1 HETATM 5 C C3 GOL . . . B 2 11.33 14.921 56.242 1 66.34 ? C3 GOL 701 A 1 HETATM 6 O O3 GOL . . . B 2 11.423 15.688 57.418 1 45.39 ? O3 GOL 701 A 1 HETATM 7 H H11 GOL . . . B 2 12.264 13.229 54.636 1 77.77 ? H11 GOL 701 A 1 HETATM 8 H H12 GOL . . . B 2 11.957 14.398 53.668 1 77.77 ? H12 GOL 701 A 1 HETATM 9 H H2 GOL . . . B 2 13.422 14.859 56.079 1 87.87 ? H2 GOL 701 A 1 HETATM 10 H HO2 GOL . . . B 2 12.703 16.9 55.713 1 83.59 ? HO2 GOL 701 A 1 HETATM 11 H H31 GOL . . . B 2 11.171 13.978 56.408 1 79.61 ? H31 GOL 701 A 1 HETATM 12 H H32 GOL . . . B 2 10.612 15.202 55.654 1 79.61 ? H32 GOL 701 A 1 HETATM 13 H HO3 GOL . . . B 2 10.647 15.699 57.775 1 54.47 ? HO3 GOL 701 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 13 #