data_8UIQ # _model_server_result.job_id 5fE3EFHVDINwR5YexWWqBA _model_server_result.datetime_utc '2024-12-21 17:52:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uiq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 8UIQ # _exptl.entry_id 8UIQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 111.165 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-PYRIDINETHIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UIQ _cell.length_a 47.376 _cell.length_b 69.244 _cell.length_c 115.27 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UIQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H5 N S' _chem_comp.formula_weight 111.165 _chem_comp.id PYS _chem_comp.mon_nstd_flag . _chem_comp.name 2-PYRIDINETHIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 PYS doub 368 n y N1 C6 PYS sing 369 n y C2 C3 PYS sing 370 n y C2 S2 PYS sing 371 n n C3 C4 PYS doub 372 n y C3 H3 PYS sing 373 n n C4 C5 PYS sing 374 n y C4 H4 PYS sing 375 n n C5 C6 PYS doub 376 n y C5 H5 PYS sing 377 n n C6 H6 PYS sing 378 n n S2 HS2 PYS sing 379 n n # _atom_sites.entry_id 8UIQ _atom_sites.fract_transf_matrix[1][1] 0.021108 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014442 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008675 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 401 401 FAD FAD . C 3 PYS A 1 402 402 PYS PYS . D 4 HOH A 1 501 38 HOH HOH . D 4 HOH A 2 502 24 HOH HOH . D 4 HOH A 3 503 84 HOH HOH . D 4 HOH A 4 504 58 HOH HOH . D 4 HOH A 5 505 14 HOH HOH . D 4 HOH A 6 506 33 HOH HOH . D 4 HOH A 7 507 72 HOH HOH . D 4 HOH A 8 508 50 HOH HOH . D 4 HOH A 9 509 75 HOH HOH . D 4 HOH A 10 510 45 HOH HOH . D 4 HOH A 11 511 6 HOH HOH . D 4 HOH A 12 512 77 HOH HOH . D 4 HOH A 13 513 29 HOH HOH . D 4 HOH A 14 514 59 HOH HOH . D 4 HOH A 15 515 8 HOH HOH . D 4 HOH A 16 516 85 HOH HOH . D 4 HOH A 17 517 1 HOH HOH . D 4 HOH A 18 518 9 HOH HOH . D 4 HOH A 19 519 4 HOH HOH . D 4 HOH A 20 520 48 HOH HOH . D 4 HOH A 21 521 46 HOH HOH . D 4 HOH A 22 522 57 HOH HOH . D 4 HOH A 23 523 32 HOH HOH . D 4 HOH A 24 524 11 HOH HOH . D 4 HOH A 25 525 90 HOH HOH . D 4 HOH A 26 526 34 HOH HOH . D 4 HOH A 27 527 21 HOH HOH . D 4 HOH A 28 528 20 HOH HOH . D 4 HOH A 29 529 114 HOH HOH . D 4 HOH A 30 530 41 HOH HOH . D 4 HOH A 31 531 35 HOH HOH . D 4 HOH A 32 532 43 HOH HOH . D 4 HOH A 33 533 39 HOH HOH . D 4 HOH A 34 534 125 HOH HOH . D 4 HOH A 35 535 19 HOH HOH . D 4 HOH A 36 536 44 HOH HOH . D 4 HOH A 37 537 5 HOH HOH . D 4 HOH A 38 538 106 HOH HOH . D 4 HOH A 39 539 104 HOH HOH . D 4 HOH A 40 540 23 HOH HOH . D 4 HOH A 41 541 2 HOH HOH . D 4 HOH A 42 542 36 HOH HOH . D 4 HOH A 43 543 25 HOH HOH . D 4 HOH A 44 544 53 HOH HOH . D 4 HOH A 45 545 110 HOH HOH . D 4 HOH A 46 546 40 HOH HOH . D 4 HOH A 47 547 99 HOH HOH . D 4 HOH A 48 548 28 HOH HOH . D 4 HOH A 49 549 52 HOH HOH . D 4 HOH A 50 550 95 HOH HOH . D 4 HOH A 51 551 100 HOH HOH . D 4 HOH A 52 552 18 HOH HOH . D 4 HOH A 53 553 68 HOH HOH . D 4 HOH A 54 554 81 HOH HOH . D 4 HOH A 55 555 13 HOH HOH . D 4 HOH A 56 556 7 HOH HOH . D 4 HOH A 57 557 3 HOH HOH . D 4 HOH A 58 558 97 HOH HOH . D 4 HOH A 59 559 98 HOH HOH . D 4 HOH A 60 560 31 HOH HOH . D 4 HOH A 61 561 87 HOH HOH . D 4 HOH A 62 562 15 HOH HOH . D 4 HOH A 63 563 37 HOH HOH . D 4 HOH A 64 564 42 HOH HOH . D 4 HOH A 65 565 88 HOH HOH . D 4 HOH A 66 566 101 HOH HOH . D 4 HOH A 67 567 83 HOH HOH . D 4 HOH A 68 568 16 HOH HOH . D 4 HOH A 69 569 12 HOH HOH . D 4 HOH A 70 570 117 HOH HOH . D 4 HOH A 71 571 108 HOH HOH . D 4 HOH A 72 572 47 HOH HOH . D 4 HOH A 73 573 22 HOH HOH . D 4 HOH A 74 574 26 HOH HOH . D 4 HOH A 75 575 71 HOH HOH . D 4 HOH A 76 576 17 HOH HOH . D 4 HOH A 77 577 91 HOH HOH . D 4 HOH A 78 578 10 HOH HOH . D 4 HOH A 79 579 74 HOH HOH . D 4 HOH A 80 580 86 HOH HOH . D 4 HOH A 81 581 70 HOH HOH . D 4 HOH A 82 582 76 HOH HOH . D 4 HOH A 83 583 113 HOH HOH . D 4 HOH A 84 584 124 HOH HOH . D 4 HOH A 85 585 55 HOH HOH . D 4 HOH A 86 586 49 HOH HOH . D 4 HOH A 87 587 54 HOH HOH . D 4 HOH A 88 588 122 HOH HOH . D 4 HOH A 89 589 123 HOH HOH . D 4 HOH A 90 590 73 HOH HOH . D 4 HOH A 91 591 69 HOH HOH . D 4 HOH A 92 592 127 HOH HOH . D 4 HOH A 93 593 126 HOH HOH . D 4 HOH A 94 594 112 HOH HOH . D 4 HOH A 95 595 96 HOH HOH . D 4 HOH A 96 596 116 HOH HOH . D 4 HOH A 97 597 82 HOH HOH . D 4 HOH A 98 598 89 HOH HOH . D 4 HOH A 99 599 102 HOH HOH . D 4 HOH A 100 600 119 HOH HOH . D 4 HOH A 101 601 105 HOH HOH . D 4 HOH A 102 602 128 HOH HOH . D 4 HOH A 103 603 115 HOH HOH . D 4 HOH A 104 604 93 HOH HOH . D 4 HOH A 105 605 80 HOH HOH . D 4 HOH A 106 606 103 HOH HOH . D 4 HOH A 107 607 94 HOH HOH . D 4 HOH A 108 608 66 HOH HOH . D 4 HOH A 109 609 67 HOH HOH . D 4 HOH A 110 610 79 HOH HOH . D 4 HOH A 111 611 107 HOH HOH . D 4 HOH A 112 612 92 HOH HOH . D 4 HOH A 113 613 121 HOH HOH . D 4 HOH A 114 614 118 HOH HOH . D 4 HOH A 115 615 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 PYS . . . C 3 -3.04 2.124 15.429 0.75 49.45 ? N1 PYS 402 A 1 HETATM 2 C C2 PYS . . . C 3 -3.741 2.03 16.547 0.75 46.4 ? C2 PYS 402 A 1 HETATM 3 C C3 PYS . . . C 3 -3.16 1.78 17.791 0.75 49.65 ? C3 PYS 402 A 1 HETATM 4 C C4 PYS . . . C 3 -1.788 1.623 17.846 0.75 51.4 ? C4 PYS 402 A 1 HETATM 5 C C5 PYS . . . C 3 -1.041 1.719 16.678 0.75 48.99 ? C5 PYS 402 A 1 HETATM 6 C C6 PYS . . . C 3 -1.72 1.971 15.498 0.75 51.32 ? C6 PYS 402 A 1 HETATM 7 S S2 PYS . . . C 3 -5.496 2.233 16.47 0.75 39.95 ? S2 PYS 402 A 1 # _model_server_stats.io_time_ms 109 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 357 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #