data_8UJM # _model_server_result.job_id '_DrjrPqi_QzTV5RIJtSRUw' _model_server_result.datetime_utc '2024-11-05 04:27:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ujm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 8UJM # _exptl.entry_id 8UJM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.2 _cell.angle_gamma 90 _cell.entry_id 8UJM _cell.length_a 56.405 _cell.length_b 102.953 _cell.length_c 57.244 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UJM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 236 A CYS 236 1_555 A SG CYS 247 A CYS 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? disulf ? disulf2 B SG CYS 236 B CYS 236 1_555 B SG CYS 247 B CYS 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc1 A OD2 ASP 29 A ASP 29 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc2 A O ASP 31 A ASP 31 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc3 A OD1 ASN 149 A ASN 149 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? metalc ? metalc4 C MG MG . A MG 401 1_555 E O HOH . A HOH 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc5 C MG MG . A MG 401 1_555 E O HOH . A HOH 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc6 C MG MG . A MG 401 1_555 E O HOH . A HOH 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc7 B OD2 ASP 29 B ASP 29 1_555 D MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc8 B O ASP 31 B ASP 31 1_555 D MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc9 B OD1 ASN 149 B ASN 149 1_555 D MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc10 D MG MG . B MG 401 1_555 F O HOH . B HOH 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc11 D MG MG . B MG 401 1_555 F O HOH . B HOH 537 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc12 D MG MG . B MG 401 1_555 F O HOH . B HOH 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8UJM _atom_sites.fract_transf_matrix[1][1] 0.017729 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009506 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009713 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019822 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 401 401 MG MG . D 2 MG B 1 401 401 MG MG . E 3 HOH A 1 501 110 HOH HOH . E 3 HOH A 2 502 236 HOH HOH . E 3 HOH A 3 503 79 HOH HOH . E 3 HOH A 4 504 98 HOH HOH . E 3 HOH A 5 505 114 HOH HOH . E 3 HOH A 6 506 96 HOH HOH . E 3 HOH A 7 507 72 HOH HOH . E 3 HOH A 8 508 22 HOH HOH . E 3 HOH A 9 509 99 HOH HOH . E 3 HOH A 10 510 3 HOH HOH . E 3 HOH A 11 511 29 HOH HOH . E 3 HOH A 12 512 178 HOH HOH . E 3 HOH A 13 513 23 HOH HOH . E 3 HOH A 14 514 12 HOH HOH . E 3 HOH A 15 515 7 HOH HOH . E 3 HOH A 16 516 288 HOH HOH . E 3 HOH A 17 517 32 HOH HOH . E 3 HOH A 18 518 149 HOH HOH . E 3 HOH A 19 519 148 HOH HOH . E 3 HOH A 20 520 74 HOH HOH . E 3 HOH A 21 521 82 HOH HOH . E 3 HOH A 22 522 53 HOH HOH . E 3 HOH A 23 523 1 HOH HOH . E 3 HOH A 24 524 174 HOH HOH . E 3 HOH A 25 525 162 HOH HOH . E 3 HOH A 26 526 89 HOH HOH . E 3 HOH A 27 527 168 HOH HOH . E 3 HOH A 28 528 195 HOH HOH . E 3 HOH A 29 529 192 HOH HOH . E 3 HOH A 30 530 123 HOH HOH . E 3 HOH A 31 531 25 HOH HOH . E 3 HOH A 32 532 105 HOH HOH . E 3 HOH A 33 533 56 HOH HOH . E 3 HOH A 34 534 159 HOH HOH . E 3 HOH A 35 535 103 HOH HOH . E 3 HOH A 36 536 118 HOH HOH . E 3 HOH A 37 537 244 HOH HOH . E 3 HOH A 38 538 104 HOH HOH . E 3 HOH A 39 539 90 HOH HOH . E 3 HOH A 40 540 150 HOH HOH . E 3 HOH A 41 541 241 HOH HOH . E 3 HOH A 42 542 225 HOH HOH . E 3 HOH A 43 543 158 HOH HOH . E 3 HOH A 44 544 143 HOH HOH . E 3 HOH A 45 545 31 HOH HOH . E 3 HOH A 46 546 37 HOH HOH . E 3 HOH A 47 547 49 HOH HOH . E 3 HOH A 48 548 75 HOH HOH . E 3 HOH A 49 549 14 HOH HOH . E 3 HOH A 50 550 46 HOH HOH . E 3 HOH A 51 551 141 HOH HOH . E 3 HOH A 52 552 213 HOH HOH . E 3 HOH A 53 553 88 HOH HOH . E 3 HOH A 54 554 35 HOH HOH . E 3 HOH A 55 555 196 HOH HOH . E 3 HOH A 56 556 111 HOH HOH . E 3 HOH A 57 557 126 HOH HOH . E 3 HOH A 58 558 5 HOH HOH . E 3 HOH A 59 559 63 HOH HOH . E 3 HOH A 60 560 68 HOH HOH . E 3 HOH A 61 561 64 HOH HOH . E 3 HOH A 62 562 44 HOH HOH . E 3 HOH A 63 563 86 HOH HOH . E 3 HOH A 64 564 61 HOH HOH . E 3 HOH A 65 565 106 HOH HOH . E 3 HOH A 66 566 202 HOH HOH . E 3 HOH A 67 567 15 HOH HOH . E 3 HOH A 68 568 100 HOH HOH . E 3 HOH A 69 569 50 HOH HOH . E 3 HOH A 70 570 209 HOH HOH . E 3 HOH A 71 571 165 HOH HOH . E 3 HOH A 72 572 27 HOH HOH . E 3 HOH A 73 573 112 HOH HOH . E 3 HOH A 74 574 185 HOH HOH . E 3 HOH A 75 575 66 HOH HOH . E 3 HOH A 76 576 33 HOH HOH . E 3 HOH A 77 577 2 HOH HOH . E 3 HOH A 78 578 177 HOH HOH . E 3 HOH A 79 579 80 HOH HOH . E 3 HOH A 80 580 146 HOH HOH . E 3 HOH A 81 581 235 HOH HOH . E 3 HOH A 82 582 108 HOH HOH . E 3 HOH A 83 583 179 HOH HOH . E 3 HOH A 84 584 226 HOH HOH . E 3 HOH A 85 585 216 HOH HOH . E 3 HOH A 86 586 140 HOH HOH . E 3 HOH A 87 587 228 HOH HOH . E 3 HOH A 88 588 129 HOH HOH . E 3 HOH A 89 589 247 HOH HOH . E 3 HOH A 90 590 274 HOH HOH . E 3 HOH A 91 591 268 HOH HOH . E 3 HOH A 92 592 16 HOH HOH . E 3 HOH A 93 593 121 HOH HOH . E 3 HOH A 94 594 145 HOH HOH . E 3 HOH A 95 595 175 HOH HOH . E 3 HOH A 96 596 198 HOH HOH . E 3 HOH A 97 597 221 HOH HOH . E 3 HOH A 98 598 157 HOH HOH . E 3 HOH A 99 599 222 HOH HOH . E 3 HOH A 100 600 286 HOH HOH . E 3 HOH A 101 601 289 HOH HOH . E 3 HOH A 102 602 223 HOH HOH . E 3 HOH A 103 603 229 HOH HOH . E 3 HOH A 104 604 167 HOH HOH . E 3 HOH A 105 605 136 HOH HOH . E 3 HOH A 106 606 248 HOH HOH . E 3 HOH A 107 607 227 HOH HOH . E 3 HOH A 108 608 224 HOH HOH . E 3 HOH A 109 609 234 HOH HOH . E 3 HOH A 110 610 287 HOH HOH . E 3 HOH A 111 611 246 HOH HOH . E 3 HOH A 112 612 277 HOH HOH . E 3 HOH A 113 613 284 HOH HOH . E 3 HOH A 114 614 220 HOH HOH . E 3 HOH A 115 615 194 HOH HOH . E 3 HOH A 116 616 211 HOH HOH . E 3 HOH A 117 617 184 HOH HOH . E 3 HOH A 118 618 200 HOH HOH . E 3 HOH A 119 619 127 HOH HOH . E 3 HOH A 120 620 137 HOH HOH . E 3 HOH A 121 621 243 HOH HOH . E 3 HOH A 122 622 204 HOH HOH . E 3 HOH A 123 623 278 HOH HOH . E 3 HOH A 124 624 166 HOH HOH . E 3 HOH A 125 625 242 HOH HOH . E 3 HOH A 126 626 135 HOH HOH . E 3 HOH A 127 627 245 HOH HOH . E 3 HOH A 128 628 113 HOH HOH . E 3 HOH A 129 629 164 HOH HOH . E 3 HOH A 130 630 193 HOH HOH . E 3 HOH A 131 631 219 HOH HOH . E 3 HOH A 132 632 280 HOH HOH . E 3 HOH A 133 633 218 HOH HOH . E 3 HOH A 134 634 189 HOH HOH . E 3 HOH A 135 635 217 HOH HOH . E 3 HOH A 136 636 285 HOH HOH . E 3 HOH A 137 637 188 HOH HOH . E 3 HOH A 138 638 183 HOH HOH . F 3 HOH B 1 501 171 HOH HOH . F 3 HOH B 2 502 20 HOH HOH . F 3 HOH B 3 503 43 HOH HOH . F 3 HOH B 4 504 58 HOH HOH . F 3 HOH B 5 505 240 HOH HOH . F 3 HOH B 6 506 91 HOH HOH . F 3 HOH B 7 507 40 HOH HOH . F 3 HOH B 8 508 197 HOH HOH . F 3 HOH B 9 509 13 HOH HOH . F 3 HOH B 10 510 57 HOH HOH . F 3 HOH B 11 511 69 HOH HOH . F 3 HOH B 12 512 270 HOH HOH . F 3 HOH B 13 513 276 HOH HOH . F 3 HOH B 14 514 48 HOH HOH . F 3 HOH B 15 515 153 HOH HOH . F 3 HOH B 16 516 124 HOH HOH . F 3 HOH B 17 517 85 HOH HOH . F 3 HOH B 18 518 28 HOH HOH . F 3 HOH B 19 519 9 HOH HOH . F 3 HOH B 20 520 59 HOH HOH . F 3 HOH B 21 521 8 HOH HOH . F 3 HOH B 22 522 92 HOH HOH . F 3 HOH B 23 523 11 HOH HOH . F 3 HOH B 24 524 30 HOH HOH . F 3 HOH B 25 525 251 HOH HOH . F 3 HOH B 26 526 17 HOH HOH . F 3 HOH B 27 527 39 HOH HOH . F 3 HOH B 28 528 109 HOH HOH . F 3 HOH B 29 529 21 HOH HOH . F 3 HOH B 30 530 81 HOH HOH . F 3 HOH B 31 531 6 HOH HOH . F 3 HOH B 32 532 139 HOH HOH . F 3 HOH B 33 533 45 HOH HOH . F 3 HOH B 34 534 78 HOH HOH . F 3 HOH B 35 535 42 HOH HOH . F 3 HOH B 36 536 77 HOH HOH . F 3 HOH B 37 537 170 HOH HOH . F 3 HOH B 38 538 130 HOH HOH . F 3 HOH B 39 539 65 HOH HOH . F 3 HOH B 40 540 54 HOH HOH . F 3 HOH B 41 541 67 HOH HOH . F 3 HOH B 42 542 107 HOH HOH . F 3 HOH B 43 543 76 HOH HOH . F 3 HOH B 44 544 60 HOH HOH . F 3 HOH B 45 545 47 HOH HOH . F 3 HOH B 46 546 36 HOH HOH . F 3 HOH B 47 547 95 HOH HOH . F 3 HOH B 48 548 52 HOH HOH . F 3 HOH B 49 549 19 HOH HOH . F 3 HOH B 50 550 267 HOH HOH . F 3 HOH B 51 551 51 HOH HOH . F 3 HOH B 52 552 10 HOH HOH . F 3 HOH B 53 553 71 HOH HOH . F 3 HOH B 54 554 283 HOH HOH . F 3 HOH B 55 555 133 HOH HOH . F 3 HOH B 56 556 128 HOH HOH . F 3 HOH B 57 557 62 HOH HOH . F 3 HOH B 58 558 97 HOH HOH . F 3 HOH B 59 559 101 HOH HOH . F 3 HOH B 60 560 152 HOH HOH . F 3 HOH B 61 561 70 HOH HOH . F 3 HOH B 62 562 115 HOH HOH . F 3 HOH B 63 563 161 HOH HOH . F 3 HOH B 64 564 125 HOH HOH . F 3 HOH B 65 565 134 HOH HOH . F 3 HOH B 66 566 201 HOH HOH . F 3 HOH B 67 567 87 HOH HOH . F 3 HOH B 68 568 119 HOH HOH . F 3 HOH B 69 569 155 HOH HOH . F 3 HOH B 70 570 55 HOH HOH . F 3 HOH B 71 571 34 HOH HOH . F 3 HOH B 72 572 263 HOH HOH . F 3 HOH B 73 573 41 HOH HOH . F 3 HOH B 74 574 73 HOH HOH . F 3 HOH B 75 575 262 HOH HOH . F 3 HOH B 76 576 26 HOH HOH . F 3 HOH B 77 577 156 HOH HOH . F 3 HOH B 78 578 254 HOH HOH . F 3 HOH B 79 579 24 HOH HOH . F 3 HOH B 80 580 4 HOH HOH . F 3 HOH B 81 581 181 HOH HOH . F 3 HOH B 82 582 160 HOH HOH . F 3 HOH B 83 583 38 HOH HOH . F 3 HOH B 84 584 260 HOH HOH . F 3 HOH B 85 585 84 HOH HOH . F 3 HOH B 86 586 255 HOH HOH . F 3 HOH B 87 587 131 HOH HOH . F 3 HOH B 88 588 259 HOH HOH . F 3 HOH B 89 589 18 HOH HOH . F 3 HOH B 90 590 261 HOH HOH . F 3 HOH B 91 591 94 HOH HOH . F 3 HOH B 92 592 117 HOH HOH . F 3 HOH B 93 593 206 HOH HOH . F 3 HOH B 94 594 291 HOH HOH . F 3 HOH B 95 595 239 HOH HOH . F 3 HOH B 96 596 233 HOH HOH . F 3 HOH B 97 597 252 HOH HOH . F 3 HOH B 98 598 151 HOH HOH . F 3 HOH B 99 599 249 HOH HOH . F 3 HOH B 100 600 256 HOH HOH . F 3 HOH B 101 601 144 HOH HOH . F 3 HOH B 102 602 203 HOH HOH . F 3 HOH B 103 603 231 HOH HOH . F 3 HOH B 104 604 238 HOH HOH . F 3 HOH B 105 605 257 HOH HOH . F 3 HOH B 106 606 253 HOH HOH . F 3 HOH B 107 607 138 HOH HOH . F 3 HOH B 108 608 199 HOH HOH . F 3 HOH B 109 609 269 HOH HOH . F 3 HOH B 110 610 275 HOH HOH . F 3 HOH B 111 611 271 HOH HOH . F 3 HOH B 112 612 180 HOH HOH . F 3 HOH B 113 613 210 HOH HOH . F 3 HOH B 114 614 237 HOH HOH . F 3 HOH B 115 615 173 HOH HOH . F 3 HOH B 116 616 272 HOH HOH . F 3 HOH B 117 617 279 HOH HOH . F 3 HOH B 118 618 265 HOH HOH . F 3 HOH B 119 619 182 HOH HOH . F 3 HOH B 120 620 232 HOH HOH . F 3 HOH B 121 621 191 HOH HOH . F 3 HOH B 122 622 230 HOH HOH . F 3 HOH B 123 623 102 HOH HOH . F 3 HOH B 124 624 258 HOH HOH . F 3 HOH B 125 625 281 HOH HOH . F 3 HOH B 126 626 176 HOH HOH . F 3 HOH B 127 627 290 HOH HOH . F 3 HOH B 128 628 120 HOH HOH . F 3 HOH B 129 629 132 HOH HOH . F 3 HOH B 130 630 282 HOH HOH . F 3 HOH B 131 631 208 HOH HOH . F 3 HOH B 132 632 266 HOH HOH . F 3 HOH B 133 633 116 HOH HOH . F 3 HOH B 134 634 212 HOH HOH . F 3 HOH B 135 635 83 HOH HOH . F 3 HOH B 136 636 93 HOH HOH . F 3 HOH B 137 637 264 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -32.805 _atom_site.Cartn_y 7.097 _atom_site.Cartn_z 27.087 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 207 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #