data_8UJT # _model_server_result.job_id ZcwkUzPTscEY2UubUolkyw _model_server_result.datetime_utc '2024-11-23 10:49:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8ujt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":502}' # _entry.id 8UJT # _exptl.entry_id 8UJT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8UJT _cell.length_a 98.991 _cell.length_b 98.991 _cell.length_c 81.818 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UJT _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O3' DT 3 T DT 3 1_555 B P XB9 4 T XB9 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.609 ? covale ? covale2 B O3' XB9 4 T XB9 4 1_555 B P DA 5 T DA 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? metalc ? metalc1 A OD1 ASP 16 A ASP 13 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc2 A OD2 ASP 16 A ASP 13 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc3 A O MET 17 A MET 14 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc4 A OD2 ASP 118 A ASP 115 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc5 A OD1 ASP 118 A ASP 115 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc6 A OE1 GLU 119 A GLU 116 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc7 D O2A DZ4 . A DZ4 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc8 D O2B DZ4 . A DZ4 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc9 D O3G DZ4 . A DZ4 501 1_555 E MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc10 D O2A DZ4 . A DZ4 501 1_555 F MG MG . A MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc11 F MG MG . A MG 503 1_555 G O HOH . A HOH 615 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc12 F MG MG . A MG 503 1_555 C O3' DT 8 P DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? hydrog WATSON-CRICK hydrog1 B N1 DA 5 T DA 5 1_555 C N3 DT 8 P DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N6 DA 5 T DA 5 1_555 C O4 DT 8 P DT 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B N3 DT 6 T DT 6 1_555 C N1 DA 7 P DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B O4 DT 6 T DT 6 1_555 C N6 DA 7 P DA 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N1 DG 7 T DG 7 1_555 C N3 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N2 DG 7 T DG 7 1_555 C O2 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B O6 DG 7 T DG 7 1_555 C N4 DC 6 P DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N1 DA 8 T DA 8 1_555 C N3 DT 5 P DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N6 DA 8 T DA 8 1_555 C O4 DT 5 P DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N3 DC 9 T DC 9 1_555 C N1 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B N4 DC 9 T DC 9 1_555 C O6 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B O2 DC 9 T DC 9 1_555 C N2 DG 4 P DG 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N1 DG 10 T DG 10 1_555 C N3 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N2 DG 10 T DG 10 1_555 C O2 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B O6 DG 10 T DG 10 1_555 C N4 DC 3 P DC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N3 DC 11 T DC 11 1_555 C N1 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N4 DC 11 T DC 11 1_555 C O6 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B O2 DC 11 T DC 11 1_555 C N2 DG 2 P DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N3 DT 12 T DT 12 1_555 C N1 DA 1 P DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B O4 DT 12 T DT 12 1_555 C N6 DA 1 P DA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8UJT _atom_sites.fract_transf_matrix[1][1] 0.010102 _atom_sites.fract_transf_matrix[1][2] 0.005832 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011665 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012222 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 DZ4 A 1 501 501 DZ4 DZ4 . E 5 MG A 1 502 502 MG MG . F 5 MG A 1 503 503 MG MG . G 6 HOH A 1 601 87 HOH HOH . G 6 HOH A 2 602 15 HOH HOH . G 6 HOH A 3 603 62 HOH HOH . G 6 HOH A 4 604 66 HOH HOH . G 6 HOH A 5 605 76 HOH HOH . G 6 HOH A 6 606 5 HOH HOH . G 6 HOH A 7 607 21 HOH HOH . G 6 HOH A 8 608 69 HOH HOH . G 6 HOH A 9 609 71 HOH HOH . G 6 HOH A 10 610 57 HOH HOH . G 6 HOH A 11 611 61 HOH HOH . G 6 HOH A 12 612 78 HOH HOH . G 6 HOH A 13 613 10 HOH HOH . G 6 HOH A 14 614 4 HOH HOH . G 6 HOH A 15 615 8 HOH HOH . G 6 HOH A 16 616 1 HOH HOH . G 6 HOH A 17 617 22 HOH HOH . G 6 HOH A 18 618 14 HOH HOH . G 6 HOH A 19 619 40 HOH HOH . G 6 HOH A 20 620 50 HOH HOH . G 6 HOH A 21 621 18 HOH HOH . G 6 HOH A 22 622 9 HOH HOH . G 6 HOH A 23 623 68 HOH HOH . G 6 HOH A 24 624 53 HOH HOH . G 6 HOH A 25 625 7 HOH HOH . G 6 HOH A 26 626 17 HOH HOH . G 6 HOH A 27 627 11 HOH HOH . G 6 HOH A 28 628 72 HOH HOH . G 6 HOH A 29 629 42 HOH HOH . G 6 HOH A 30 630 74 HOH HOH . G 6 HOH A 31 631 46 HOH HOH . G 6 HOH A 32 632 41 HOH HOH . G 6 HOH A 33 633 70 HOH HOH . G 6 HOH A 34 634 75 HOH HOH . G 6 HOH A 35 635 83 HOH HOH . G 6 HOH A 36 636 3 HOH HOH . G 6 HOH A 37 637 24 HOH HOH . G 6 HOH A 38 638 82 HOH HOH . G 6 HOH A 39 639 85 HOH HOH . G 6 HOH A 40 640 12 HOH HOH . G 6 HOH A 41 641 26 HOH HOH . G 6 HOH A 42 642 27 HOH HOH . G 6 HOH A 43 643 35 HOH HOH . G 6 HOH A 44 644 20 HOH HOH . G 6 HOH A 45 645 81 HOH HOH . G 6 HOH A 46 646 43 HOH HOH . G 6 HOH A 47 647 44 HOH HOH . G 6 HOH A 48 648 2 HOH HOH . G 6 HOH A 49 649 25 HOH HOH . G 6 HOH A 50 650 6 HOH HOH . G 6 HOH A 51 651 84 HOH HOH . G 6 HOH A 52 652 33 HOH HOH . G 6 HOH A 53 653 19 HOH HOH . G 6 HOH A 54 654 56 HOH HOH . G 6 HOH A 55 655 86 HOH HOH . G 6 HOH A 56 656 34 HOH HOH . G 6 HOH A 57 657 36 HOH HOH . G 6 HOH A 58 658 64 HOH HOH . G 6 HOH A 59 659 49 HOH HOH . G 6 HOH A 60 660 65 HOH HOH . G 6 HOH A 61 661 39 HOH HOH . G 6 HOH A 62 662 47 HOH HOH . G 6 HOH A 63 663 16 HOH HOH . G 6 HOH A 64 664 52 HOH HOH . G 6 HOH A 65 665 67 HOH HOH . G 6 HOH A 66 666 38 HOH HOH . G 6 HOH A 67 667 23 HOH HOH . G 6 HOH A 68 668 30 HOH HOH . G 6 HOH A 69 669 54 HOH HOH . G 6 HOH A 70 670 63 HOH HOH . G 6 HOH A 71 671 77 HOH HOH . G 6 HOH A 72 672 55 HOH HOH . G 6 HOH A 73 673 58 HOH HOH . G 6 HOH A 74 674 51 HOH HOH . G 6 HOH A 75 675 48 HOH HOH . G 6 HOH A 76 676 31 HOH HOH . G 6 HOH A 77 677 73 HOH HOH . G 6 HOH A 78 678 45 HOH HOH . H 6 HOH T 1 101 80 HOH HOH . H 6 HOH T 2 102 29 HOH HOH . I 6 HOH P 1 101 59 HOH HOH . I 6 HOH P 2 102 60 HOH HOH . I 6 HOH P 3 103 13 HOH HOH . I 6 HOH P 4 104 28 HOH HOH . I 6 HOH P 5 105 37 HOH HOH . I 6 HOH P 6 106 79 HOH HOH . I 6 HOH P 7 107 32 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x -55.18 _atom_site.Cartn_y -2.959 _atom_site.Cartn_z 3.075 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.9 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 1 #