data_8UO9 # _model_server_result.job_id HDLjJh-6IRESyVJQlng4WQ _model_server_result.datetime_utc '2025-01-03 00:28:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uo9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 8UO9 # _exptl.entry_id 8UO9 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 444.395 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-1-{[(4S)-2-(methoxymethyl)-6-(trifluoromethyl)imidazo[2,1-b][1,3,4]thiadiazol-5-yl]methyl}-4-(4,4,4-trifluorobutyl)pyrrolidin-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UO9 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UO9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 3 oligosaccharide 4 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C NAG 1 D 1 NAG D 1 NAG 3 n C NAG 2 D 2 NAG D 2 NAG 3 n C BMA 3 D 3 BMA D 3 BMA 4 n D NAG 1 G 1 NAG G 1 NAG 4 n D NAG 2 G 2 NAG G 2 NAG 4 n E NAG 1 I 1 NAG I 1 NAG 4 n E NAG 2 I 2 NAG I 2 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A ND2 ASN 436 A ASN 498 1_555 E C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? covale ? covale2 A ND2 ASN 486 A ASN 548 1_555 D C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale3 A ND2 ASN 511 A ASN 573 1_555 C C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale4 C O4 NAG . D NAG 1 1_555 C C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale5 C O4 NAG . D NAG 2 1_555 C C1 BMA . D BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.446 ? covale ? covale6 D O4 NAG . G NAG 1 1_555 D C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale7 E O4 NAG . I NAG 1 1_555 E C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? # _chem_comp.formula 'C16 H18 F6 N4 O2 S' _chem_comp.formula_weight 444.395 _chem_comp.id X49 _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-1-{[(4S)-2-(methoxymethyl)-6-(trifluoromethyl)imidazo[2,1-b][1,3,4]thiadiazol-5-yl]methyl}-4-(4,4,4-trifluorobutyl)pyrrolidin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F18 C15 X49 sing 514 n n F17 C15 X49 sing 515 n n C15 F16 X49 sing 516 n n C15 C14 X49 sing 517 n n C14 C13 X49 sing 518 n n C13 C12 X49 sing 519 n n S25 C24 X49 sing 520 n y S25 C04 X49 sing 521 n y F27 C26 X49 sing 522 n n N23 C24 X49 doub 523 n y N23 C22 X49 sing 524 n y C12 C11 X49 sing 525 n n C24 N06 X49 sing 526 n y C11 C10 X49 sing 527 n n C11 C19 X49 sing 528 n n C22 C26 X49 sing 529 n n C22 C07 X49 doub 530 n y C04 C03 X49 sing 531 n n C04 N05 X49 doub 532 n y C26 F28 X49 sing 533 n n C26 F29 X49 sing 534 n n C03 O02 X49 sing 535 n n O02 C01 X49 sing 536 n n N06 N05 X49 sing 537 n y N06 C07 X49 sing 538 n y C10 N09 X49 sing 539 n n C07 C08 X49 sing 540 n n C19 C20 X49 sing 541 n n N09 C20 X49 sing 542 n n N09 C08 X49 sing 543 n n C20 O21 X49 doub 544 n n C11 H1 X49 sing 545 n n C12 H2 X49 sing 546 n n C12 H3 X49 sing 547 n n C13 H4 X49 sing 548 n n C13 H5 X49 sing 549 n n C14 H6 X49 sing 550 n n C14 H7 X49 sing 551 n n C01 H8 X49 sing 552 n n C01 H9 X49 sing 553 n n C01 H10 X49 sing 554 n n C03 H11 X49 sing 555 n n C03 H12 X49 sing 556 n n C08 H13 X49 sing 557 n n C08 H14 X49 sing 558 n n C10 H15 X49 sing 559 n n C10 H16 X49 sing 560 n n C19 H17 X49 sing 561 n n C19 H18 X49 sing 562 n n # _atom_sites.entry_id 8UO9 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 5 X49 A 1 801 801 X49 761 . G 6 Y01 A 1 802 802 Y01 Y01 . H 7 PS1 A 1 803 803 PS1 PS1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 X49 . . . F 5 126.478 115.293 115.964 1 48.04 ? C11 X49 801 A 1 HETATM 2 C C12 X49 . . . F 5 125.114 115.497 115.326 1 44.83 ? C12 X49 801 A 1 HETATM 3 C C13 X49 . . . F 5 124.542 114.212 114.775 1 47.19 ? C13 X49 801 A 1 HETATM 4 C C14 X49 . . . F 5 123.211 114.423 114.072 1 50.73 ? C14 X49 801 A 1 HETATM 5 C C01 X49 . . . F 5 133.207 115.196 117.809 1 51.66 ? C01 X49 801 A 1 HETATM 6 C C03 X49 . . . F 5 133.619 113.347 116.29 1 49.97 ? C03 X49 801 A 1 HETATM 7 C C04 X49 . . . F 5 132.298 112.71 116.127 1 52.09 ? C04 X49 801 A 1 HETATM 8 C C07 X49 . . . F 5 128.941 112.181 116.917 1 40.8 ? C07 X49 801 A 1 HETATM 9 C C08 X49 . . . F 5 128.471 113.034 118.059 1 49.28 ? C08 X49 801 A 1 HETATM 10 C C10 X49 . . . F 5 126.58 113.957 116.64 1 45.43 ? C10 X49 801 A 1 HETATM 11 C C15 X49 . . . F 5 123.234 115.667 113.264 1 48.07 ? C15 X49 801 A 1 HETATM 12 C C19 X49 . . . F 5 126.957 116.265 117.055 1 51.31 ? C19 X49 801 A 1 HETATM 13 C C20 X49 . . . F 5 127.993 115.458 117.822 1 54.92 ? C20 X49 801 A 1 HETATM 14 C C22 X49 . . . F 5 128.367 111.253 116.123 1 42.47 ? C22 X49 801 A 1 HETATM 15 C C24 X49 . . . F 5 130.368 111.359 115.431 1 43.67 ? C24 X49 801 A 1 HETATM 16 C C26 X49 . . . F 5 126.99 110.775 116.141 1 49.84 ? C26 X49 801 A 1 HETATM 17 F F16 X49 . . . F 5 123.247 116.761 114.047 1 43.85 ? F16 X49 801 A 1 HETATM 18 F F17 X49 . . . F 5 122.151 115.854 112.503 1 47.72 ? F17 X49 801 A 1 HETATM 19 F F18 X49 . . . F 5 124.321 115.726 112.477 1 44.79 ? F18 X49 801 A 1 HETATM 20 F F27 X49 . . . F 5 126.286 111.089 115.026 1 52.08 ? F27 X49 801 A 1 HETATM 21 F F28 X49 . . . F 5 126.951 109.425 116.225 1 47.61 ? F28 X49 801 A 1 HETATM 22 F F29 X49 . . . F 5 126.291 111.236 117.169 1 56.38 ? F29 X49 801 A 1 HETATM 23 N N05 X49 . . . F 5 131.31 113.004 116.853 1 47.45 ? N05 X49 801 A 1 HETATM 24 N N06 X49 . . . F 5 130.218 112.236 116.458 1 41.05 ? N06 X49 801 A 1 HETATM 25 N N09 X49 . . . F 5 127.719 114.153 117.532 1 53.43 ? N09 X49 801 A 1 HETATM 26 N N23 X49 . . . F 5 129.268 110.749 115.198 1 42.95 ? N23 X49 801 A 1 HETATM 27 O O02 X49 . . . F 5 133.274 114.711 116.457 1 54.56 ? O02 X49 801 A 1 HETATM 28 O O21 X49 . . . F 5 128.888 115.858 118.537 1 55.05 ? O21 X49 801 A 1 HETATM 29 S S25 X49 . . . F 5 132.059 111.442 114.835 1 58.26 ? S25 X49 801 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 29 #