data_8UQV
#
_model_server_result.job_id            DlLgXXxter0ZFFgRabwpYQ 
_model_server_result.datetime_utc      '2025-08-26 18:55:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8uqv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":602}' 
#
_entry.id    8UQV 
#
_exptl.entry_id    8UQV 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              205.169 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            6-azido-6-deoxy-alpha-D-glucopyranose 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8UQV 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8UQV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 I N N 
? 3 L N N 
? 3 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 E O1 GLC . A GLC 601 1_555 F C1 XVC . A XVC 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.399 ? 
covale ? covale2 H O1 GLC . B GLC 601 1_555 I C1 XVC . B XVC 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.401 ? 
covale ? covale3 K O1 GLC . C GLC 601 1_555 L C1 XVC . C XVC 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.4 ? 
covale ? covale4 N O1 GLC . D GLC 601 1_555 O C1 XVC . D XVC 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.406 ? 
metalc ? metalc1 A OD1 ASP 197 A ASP 208 1_555 G CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.518 ? 
metalc ? metalc2 A OD2 ASP 197 A ASP 208 1_555 G CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc3 A O TYR 231 A TYR 242 1_555 G CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.867 ? 
metalc ? metalc4 A O LEU 232 A LEU 243 1_555 G CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc5 A OE1 GLU 234 A GLU 245 1_555 G CA CA . A CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.008 ? 
metalc ? metalc6 B OD2 ASP 197 B ASP 208 1_555 J CA CA . B CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.136 ? 
metalc ? metalc7 B O TYR 231 B TYR 242 1_555 J CA CA . B CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.172 ? 
metalc ? metalc8 B OE1 GLU 234 B GLU 245 1_555 J CA CA . B CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.184 ? 
metalc ? metalc9 B OE2 GLU 234 B GLU 245 1_555 J CA CA . B CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? 
metalc ? metalc10 C O TYR 231 C TYR 242 1_555 M CA CA . C CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.931 ? 
metalc ? metalc11 C OE2 GLU 234 C GLU 245 1_555 M CA CA . C CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? 
metalc ? metalc12 D OD1 ASN 129 D ASN 140 1_555 P CA CA . D CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? 
metalc ? metalc13 D OD2 ASP 197 D ASP 208 1_555 P CA CA . D CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.122 ? 
metalc ? metalc14 D O TYR 231 D TYR 242 1_555 P CA CA . D CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.124 ? 
metalc ? metalc15 D O LEU 232 D LEU 243 1_555 P CA CA . D CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? 
metalc ? metalc16 D OE1 GLU 234 D GLU 245 1_555 P CA CA . D CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? 
metalc ? metalc17 D OE2 GLU 234 D GLU 245 1_555 P CA CA . D CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? 
#
_chem_comp.formula           'C6 H11 N3 O5' 
_chem_comp.formula_weight    205.169 
_chem_comp.id                XVC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-azido-6-deoxy-alpha-D-glucopyranose 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N3 N2 XVC doub 400 n n 
N2 N1 XVC doub 401 n n 
C1 C2 XVC sing 402 n n 
C1 O5 XVC sing 403 n n 
N1 C6 XVC sing 404 n n 
C6 C5 XVC sing 405 n n 
C2 O2 XVC sing 406 n n 
C2 C3 XVC sing 407 n n 
O5 C5 XVC sing 408 n n 
C5 C4 XVC sing 409 n n 
C4 C3 XVC sing 410 n n 
C4 O4 XVC sing 411 n n 
C3 O3 XVC sing 412 n n 
C1 O1 XVC sing 413 n n 
C1 HC1 XVC sing 414 n n 
C2 HC2 XVC sing 415 n n 
C3 HC3 XVC sing 416 n n 
C4 HC4 XVC sing 417 n n 
C5 HC5 XVC sing 418 n n 
C6 HC62 XVC sing 419 n n 
C6 HC61 XVC sing 420 n n 
O2 HO2 XVC sing 421 n n 
O3 HO3 XVC sing 422 n n 
O4 HO4 XVC sing 423 n n 
O1 H2 XVC sing 424 n n 
#
_atom_sites.entry_id                     8UQV 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GLC A 1 601 602 GLC PRD . 
F 3 XVC A 1 602 602 XVC PRD . 
G 4 CA A 1 603 3 CA CA . 
H 2 GLC B 1 601 601 GLC PRD . 
I 3 XVC B 1 602 601 XVC PRD . 
J 4 CA B 1 603 2 CA CA . 
K 2 GLC C 1 601 603 GLC PRD . 
L 3 XVC C 1 602 603 XVC PRD . 
M 4 CA C 1 603 4 CA CA . 
N 2 GLC D 1 601 601 GLC PRD . 
O 3 XVC D 1 602 601 XVC PRD . 
P 4 CA D 1 603 1 CA CA . 
Q 5 HOH A 1 701 17 HOH HOH . 
Q 5 HOH A 2 702 14 HOH HOH . 
Q 5 HOH A 3 703 6 HOH HOH . 
Q 5 HOH A 4 704 24 HOH HOH . 
Q 5 HOH A 5 705 19 HOH HOH . 
Q 5 HOH A 6 706 20 HOH HOH . 
Q 5 HOH A 7 707 0 HOH HOH . 
Q 5 HOH A 8 708 13 HOH HOH . 
Q 5 HOH A 9 709 3 HOH HOH . 
Q 5 HOH A 10 710 16 HOH HOH . 
Q 5 HOH A 11 711 10 HOH HOH . 
Q 5 HOH A 12 712 1 HOH HOH . 
Q 5 HOH A 13 713 7 HOH HOH . 
Q 5 HOH A 14 714 21 HOH HOH . 
Q 5 HOH A 15 715 26 HOH HOH . 
Q 5 HOH A 16 716 9 HOH HOH . 
Q 5 HOH A 17 717 12 HOH HOH . 
Q 5 HOH A 18 718 18 HOH HOH . 
Q 5 HOH A 19 719 15 HOH HOH . 
Q 5 HOH A 20 720 5 HOH HOH . 
Q 5 HOH A 21 721 2 HOH HOH . 
Q 5 HOH A 22 722 4 HOH HOH . 
Q 5 HOH A 23 723 11 HOH HOH . 
R 5 HOH B 1 701 8 HOH HOH . 
R 5 HOH B 2 702 2 HOH HOH . 
R 5 HOH B 3 703 11 HOH HOH . 
R 5 HOH B 4 704 1 HOH HOH . 
R 5 HOH B 5 705 13 HOH HOH . 
R 5 HOH B 6 706 0 HOH HOH . 
R 5 HOH B 7 707 3 HOH HOH . 
R 5 HOH B 8 708 6 HOH HOH . 
R 5 HOH B 9 709 7 HOH HOH . 
R 5 HOH B 10 710 10 HOH HOH . 
R 5 HOH B 11 711 5 HOH HOH . 
R 5 HOH B 12 712 12 HOH HOH . 
R 5 HOH B 13 713 4 HOH HOH . 
R 5 HOH B 14 714 9 HOH HOH . 
S 5 HOH C 1 701 16 HOH HOH . 
S 5 HOH C 2 702 13 HOH HOH . 
S 5 HOH C 3 703 2 HOH HOH . 
S 5 HOH C 4 704 6 HOH HOH . 
S 5 HOH C 5 705 10 HOH HOH . 
S 5 HOH C 6 706 12 HOH HOH . 
S 5 HOH C 7 707 17 HOH HOH . 
S 5 HOH C 8 708 11 HOH HOH . 
S 5 HOH C 9 709 5 HOH HOH . 
S 5 HOH C 10 710 14 HOH HOH . 
S 5 HOH C 11 711 20 HOH HOH . 
S 5 HOH C 12 712 7 HOH HOH . 
S 5 HOH C 13 713 1 HOH HOH . 
S 5 HOH C 14 714 15 HOH HOH . 
S 5 HOH C 15 715 0 HOH HOH . 
S 5 HOH C 16 716 19 HOH HOH . 
S 5 HOH C 17 717 8 HOH HOH . 
S 5 HOH C 18 718 4 HOH HOH . 
S 5 HOH C 19 719 9 HOH HOH . 
S 5 HOH C 20 720 3 HOH HOH . 
S 5 HOH C 21 721 21 HOH HOH . 
S 5 HOH C 22 722 18 HOH HOH . 
T 5 HOH D 1 701 18 HOH HOH . 
T 5 HOH D 2 702 17 HOH HOH . 
T 5 HOH D 3 703 10 HOH HOH . 
T 5 HOH D 4 704 11 HOH HOH . 
T 5 HOH D 5 705 6 HOH HOH . 
T 5 HOH D 6 706 3 HOH HOH . 
T 5 HOH D 7 707 7 HOH HOH . 
T 5 HOH D 8 708 2 HOH HOH . 
T 5 HOH D 9 709 4 HOH HOH . 
T 5 HOH D 10 710 13 HOH HOH . 
T 5 HOH D 11 711 16 HOH HOH . 
T 5 HOH D 12 712 1 HOH HOH . 
T 5 HOH D 13 713 0 HOH HOH . 
T 5 HOH D 14 714 19 HOH HOH . 
T 5 HOH D 15 715 20 HOH HOH . 
T 5 HOH D 16 716 8 HOH HOH . 
T 5 HOH D 17 717 14 HOH HOH . 
T 5 HOH D 18 718 15 HOH HOH . 
T 5 HOH D 19 719 9 HOH HOH . 
T 5 HOH D 20 720 5 HOH HOH . 
T 5 HOH D 21 721 12 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 XVC . . . O 3 210.406 226.435 179.376 1 37.7 ? C1 XVC 602 D 1 
HETATM 2 C C2 XVC . . . O 3 210.001 227.804 178.825 1 37.7 ? C2 XVC 602 D 1 
HETATM 3 C C3 XVC . . . O 3 211.2 228.744 178.801 1 37.7 ? C3 XVC 602 D 1 
HETATM 4 C C4 XVC . . . O 3 212.267 228.18 177.867 1 37.7 ? C4 XVC 602 D 1 
HETATM 5 C C5 XVC . . . O 3 212.19 226.658 177.849 1 37.7 ? C5 XVC 602 D 1 
HETATM 6 C C6 XVC . . . O 3 213.585 226.099 177.574 1 37.7 ? C6 XVC 602 D 1 
HETATM 7 N N1 XVC . . . O 3 214.305 225.927 178.821 1 37.7 ? N1 XVC 602 D 1 
HETATM 8 N N2 XVC . . . O 3 214.902 225.811 179.868 1 37.7 ? N2 XVC 602 D 1 
HETATM 9 N N3 XVC . . . O 3 215.463 225.745 180.942 1 37.7 ? N3 XVC 602 D 1 
HETATM 10 O O2 XVC . . . O 3 209.498 227.659 177.528 1 37.7 ? O2 XVC 602 D 1 
HETATM 11 O O3 XVC . . . O 3 211.724 228.866 180.09 1 37.7 ? O3 XVC 602 D 1 
HETATM 12 O O4 XVC . . . O 3 212.05 228.67 176.574 1 37.7 ? O4 XVC 602 D 1 
HETATM 13 O O5 XVC . . . O 3 211.749 226.169 179.08 1 37.7 ? O5 XVC 602 D 1 
HETATM 14 H HC1 XVC . . . O 3 210.294 226.461 180.451 1 37.7 ? HC1 XVC 602 D 1 
HETATM 15 H HC2 XVC . . . O 3 209.238 228.226 179.465 1 37.7 ? HC2 XVC 602 D 1 
HETATM 16 H HC3 XVC . . . O 3 210.886 229.716 178.44 1 37.7 ? HC3 XVC 602 D 1 
HETATM 17 H HC4 XVC . . . O 3 213.246 228.491 178.217 1 37.7 ? HC4 XVC 602 D 1 
HETATM 18 H HC5 XVC . . . O 3 211.513 226.335 177.067 1 37.7 ? HC5 XVC 602 D 1 
HETATM 19 H HC62 XVC . . . O 3 213.491 225.15 177.057 1 37.7 ? HC62 XVC 602 D 1 
HETATM 20 H HC61 XVC . . . O 3 214.126 226.785 176.942 1 37.7 ? HC61 XVC 602 D 1 
HETATM 21 H HO2 XVC . . . O 3 209.461 228.503 177.107 1 37.7 ? HO2 XVC 602 D 1 
HETATM 22 H HO3 XVC . . . O 3 212.099 229.726 180.194 1 37.7 ? HO3 XVC 602 D 1 
HETATM 23 H HO4 XVC . . . O 3 211.255 228.3 176.225 1 37.7 ? HO4 XVC 602 D 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    163 
_model_server_stats.query_time_ms           399 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           23 
#