data_8UTK # _model_server_result.job_id r1XIJGb5mMm9TN8NJ0RdoQ _model_server_result.datetime_utc '2024-10-11 03:24:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8utk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":102}' # _entry.id 8UTK # _exptl.entry_id 8UTK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 178.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8UTK _cell.length_a 55.414 _cell.length_b 55.414 _cell.length_c 85.834 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UTK _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall 'P 31 2"' _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 13 A CYS 13 1_555 A SG CYS 22 A CYS 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? disulf ? disulf2 A SG CYS 32 A CYS 32 1_555 A SG CYS 41 A CYS 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? disulf ? disulf3 B SG CYS 13 B CYS 13 1_555 B SG CYS 22 B CYS 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? disulf ? disulf4 B SG CYS 32 B CYS 32 1_555 B SG CYS 41 B CYS 41 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.051 ? # _chem_comp.formula 'C8 H18 O4' _chem_comp.formula_weight 178.226 _chem_comp.id PG5 _chem_comp.mon_nstd_flag . _chem_comp.name 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PG5 sing 216 n n C1 H11 PG5 sing 217 n n C1 H12 PG5 sing 218 n n C1 H13 PG5 sing 219 n n O1 C2 PG5 sing 220 n n C2 C3 PG5 sing 221 n n C2 H21 PG5 sing 222 n n C2 H22 PG5 sing 223 n n C3 O2 PG5 sing 224 n n C3 H31 PG5 sing 225 n n C3 H32 PG5 sing 226 n n O2 C4 PG5 sing 227 n n C4 C5 PG5 sing 228 n n C4 H41 PG5 sing 229 n n C4 H42 PG5 sing 230 n n C5 O3 PG5 sing 231 n n C5 H51 PG5 sing 232 n n C5 H52 PG5 sing 233 n n O3 C6 PG5 sing 234 n n C6 C7 PG5 sing 235 n n C6 H61 PG5 sing 236 n n C6 H62 PG5 sing 237 n n C7 O4 PG5 sing 238 n n C7 H71 PG5 sing 239 n n C7 H72 PG5 sing 240 n n O4 C8 PG5 sing 241 n n C8 H81 PG5 sing 242 n n C8 H82 PG5 sing 243 n n C8 H83 PG5 sing 244 n n # _atom_sites.entry_id 8UTK _atom_sites.fract_transf_matrix[1][1] 0.018046 _atom_sites.fract_transf_matrix[1][2] 0.010419 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020838 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01165 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PG6 A 1 101 2 PG6 PG6 . D 3 SO4 B 1 101 101 SO4 SO4 . E 4 PG5 B 1 102 3 PG5 PG5 . F 5 HOH A 1 201 13 HOH HOH . F 5 HOH A 2 202 3 HOH HOH . F 5 HOH A 3 203 23 HOH HOH . F 5 HOH A 4 204 25 HOH HOH . F 5 HOH A 5 205 24 HOH HOH . F 5 HOH A 6 206 11 HOH HOH . F 5 HOH A 7 207 9 HOH HOH . F 5 HOH A 8 208 5 HOH HOH . F 5 HOH A 9 209 18 HOH HOH . F 5 HOH A 10 210 7 HOH HOH . G 5 HOH B 1 201 12 HOH HOH . G 5 HOH B 2 202 8 HOH HOH . G 5 HOH B 3 203 4 HOH HOH . G 5 HOH B 4 204 2 HOH HOH . G 5 HOH B 5 205 20 HOH HOH . G 5 HOH B 6 206 1 HOH HOH . G 5 HOH B 7 207 15 HOH HOH . G 5 HOH B 8 208 10 HOH HOH . G 5 HOH B 9 209 19 HOH HOH . G 5 HOH B 10 210 21 HOH HOH . G 5 HOH B 11 211 14 HOH HOH . G 5 HOH B 12 212 22 HOH HOH . G 5 HOH B 13 213 17 HOH HOH . G 5 HOH B 14 214 6 HOH HOH . G 5 HOH B 15 215 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG5 . . . E 4 8.723 -30.301 -7.925 1 75.95 ? O1 PG5 102 B 1 HETATM 2 C C2 PG5 . . . E 4 9.686 -30.954 -7.14 1 80.79 ? C2 PG5 102 B 1 HETATM 3 C C3 PG5 . . . E 4 10.86 -30.025 -6.807 1 73.7 ? C3 PG5 102 B 1 HETATM 4 O O2 PG5 . . . E 4 11.784 -30.008 -7.867 1 74.86 ? O2 PG5 102 B 1 HETATM 5 C C4 PG5 . . . E 4 13.118 -29.745 -7.513 1 57.68 ? C4 PG5 102 B 1 HETATM 6 C C5 PG5 . . . E 4 13.563 -28.392 -8.073 1 51.3 ? C5 PG5 102 B 1 HETATM 7 O O3 PG5 . . . E 4 13.541 -28.452 -9.473 1 71.58 ? O3 PG5 102 B 1 HETATM 8 C C6 PG5 . . . E 4 13.902 -27.281 -10.15 1 49.67 ? C6 PG5 102 B 1 HETATM 9 C C7 PG5 . . . E 4 12.987 -27.118 -11.362 1 55.56 ? C7 PG5 102 B 1 HETATM 10 O O4 PG5 . . . E 4 12.104 -26.048 -11.148 1 59.24 ? O4 PG5 102 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #