data_8UUU # _model_server_result.job_id 921tnKtSgoJ5TxAysP5UKQ _model_server_result.datetime_utc '2024-10-18 05:17:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uuu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 8UUU # _exptl.entry_id 8UUU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 522.589 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{(1R)-1-[(3P,5M)-3-[1-(difluoromethyl)-1H-pyrazol-4-yl]-5-(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-5-[2-(dimethylamino)ethoxy]-2-methylbenzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UUU _cell.length_a 115.393 _cell.length_b 115.393 _cell.length_c 220.691 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UUU _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall 'I 4bw 2bw' _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 20 A HIS 17 1_555 I ZN ZN . A ZN 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc2 A OD1 ASP 65 A ASP 62 1_555 E ZN ZN . A ZN 404 10_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc3 A OE2 GLU 70 A GLU 67 1_555 I ZN ZN . A ZN 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc4 A ND1 HIS 76 A HIS 73 1_555 E ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc5 A ND1 HIS 92 A HIS 89 1_555 G ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc6 A OD2 ASP 111 A ASP 108 1_555 G ZN ZN . A ZN 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc7 A SG CYS 114 A CYS 111 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? metalc ? metalc8 A SG CYS 195 A CYS 192 1_555 F ZN ZN . A ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc9 A SG CYS 227 A CYS 224 1_555 F ZN ZN . A ZN 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc10 A SG CYS 273 A CYS 270 1_555 G ZN ZN . A ZN 406 15_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.911 ? metalc ? metalc11 D ZN ZN . A ZN 403 1_555 O O HOH . A HOH 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc12 D ZN ZN . A ZN 403 1_555 O O HOH . A HOH 570 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? # _chem_comp.formula 'C28 H32 F2 N6 O2' _chem_comp.formula_weight 522.589 _chem_comp.id XYR _chem_comp.mon_nstd_flag . _chem_comp.name N-{(1R)-1-[(3P,5M)-3-[1-(difluoromethyl)-1H-pyrazol-4-yl]-5-(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-5-[2-(dimethylamino)ethoxy]-2-methylbenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 XYR sing 395 n n C2 C3 XYR doub 396 n y C3 C4 XYR sing 397 n n C4 N5 XYR sing 398 n n N5 C6 XYR sing 399 n n C6 C7 XYR sing 400 n n C6 C8 XYR sing 401 n n C8 C9 XYR doub 402 n y C9 C10 XYR sing 403 n y C10 C11 XYR sing 404 n n C11 C12 XYR doub 405 n y C12 N13 XYR sing 406 n y N13 C14 XYR sing 407 n n C14 F15 XYR sing 408 n n C14 F16 XYR sing 409 n n N13 N17 XYR sing 410 n y N17 C18 XYR doub 411 n y C10 C19 XYR doub 412 n y C19 C20 XYR sing 413 n y C20 C21 XYR sing 414 n n C21 C22 XYR doub 415 n y C22 N23 XYR sing 416 n y N23 C24 XYR sing 417 n n N23 N25 XYR sing 418 n y N25 C26 XYR doub 419 n y C20 C27 XYR doub 420 n y C4 O28 XYR doub 421 n n C3 C29 XYR sing 422 n y C29 C30 XYR doub 423 n y C30 O31 XYR sing 424 n n O31 C32 XYR sing 425 n n C32 C33 XYR sing 426 n n C33 N34 XYR sing 427 n n N34 C35 XYR sing 428 n n N34 C36 XYR sing 429 n n C30 C37 XYR sing 430 n y C37 C38 XYR doub 431 n y C38 C2 XYR sing 432 n y C27 C8 XYR sing 433 n y C18 C11 XYR sing 434 n y C26 C21 XYR sing 435 n y C1 H1B XYR sing 436 n n C1 H1A XYR sing 437 n n C1 H1C XYR sing 438 n n C6 H6 XYR sing 439 n n C9 H9 XYR sing 440 n n C12 H12 XYR sing 441 n n C14 H14 XYR sing 442 n n C18 H18 XYR sing 443 n n C19 H19 XYR sing 444 n n C22 H22 XYR sing 445 n n C24 H24C XYR sing 446 n n C24 H24B XYR sing 447 n n C24 H24A XYR sing 448 n n C26 H26 XYR sing 449 n n C27 H27 XYR sing 450 n n C29 H29 XYR sing 451 n n C32 H32B XYR sing 452 n n C32 H32A XYR sing 453 n n C33 H33B XYR sing 454 n n C33 H33A XYR sing 455 n n C35 H35A XYR sing 456 n n C35 H35C XYR sing 457 n n C35 H35B XYR sing 458 n n C36 H36A XYR sing 459 n n C36 H36B XYR sing 460 n n C36 H36C XYR sing 461 n n C37 H37 XYR sing 462 n n C38 H38 XYR sing 463 n n C7 H7C XYR sing 464 n n C7 H7B XYR sing 465 n n C7 H7A XYR sing 466 n n N5 H5 XYR sing 467 n n # _atom_sites.entry_id 8UUU _atom_sites.fract_transf_matrix[1][1] 0.008666 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008666 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004531 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 XYR A 1 401 401 XYR J13 . C 3 ACT A 1 402 401 ACT ACT . D 4 ZN A 1 403 4 ZN ZN . E 4 ZN A 1 404 8 ZN ZN . F 4 ZN A 1 405 10 ZN ZN . G 4 ZN A 1 406 11 ZN ZN . H 4 ZN A 1 407 12 ZN ZN . I 4 ZN A 1 408 13 ZN ZN . J 5 CL A 1 409 1 CL CL . K 5 CL A 1 410 2 CL CL . L 5 CL A 1 411 3 CL CL . M 6 GOL A 1 412 1 GOL GOL . N 6 GOL A 1 413 4 GOL GOL . O 7 HOH A 1 501 36 HOH HOH . O 7 HOH A 2 502 28 HOH HOH . O 7 HOH A 3 503 19 HOH HOH . O 7 HOH A 4 504 61 HOH HOH . O 7 HOH A 5 505 75 HOH HOH . O 7 HOH A 6 506 76 HOH HOH . O 7 HOH A 7 507 77 HOH HOH . O 7 HOH A 8 508 55 HOH HOH . O 7 HOH A 9 509 86 HOH HOH . O 7 HOH A 10 510 73 HOH HOH . O 7 HOH A 11 511 42 HOH HOH . O 7 HOH A 12 512 87 HOH HOH . O 7 HOH A 13 513 45 HOH HOH . O 7 HOH A 14 514 79 HOH HOH . O 7 HOH A 15 515 62 HOH HOH . O 7 HOH A 16 516 20 HOH HOH . O 7 HOH A 17 517 83 HOH HOH . O 7 HOH A 18 518 8 HOH HOH . O 7 HOH A 19 519 17 HOH HOH . O 7 HOH A 20 520 25 HOH HOH . O 7 HOH A 21 521 41 HOH HOH . O 7 HOH A 22 522 63 HOH HOH . O 7 HOH A 23 523 78 HOH HOH . O 7 HOH A 24 524 1 HOH HOH . O 7 HOH A 25 525 6 HOH HOH . O 7 HOH A 26 526 40 HOH HOH . O 7 HOH A 27 527 82 HOH HOH . O 7 HOH A 28 528 26 HOH HOH . O 7 HOH A 29 529 5 HOH HOH . O 7 HOH A 30 530 31 HOH HOH . O 7 HOH A 31 531 46 HOH HOH . O 7 HOH A 32 532 53 HOH HOH . O 7 HOH A 33 533 80 HOH HOH . O 7 HOH A 34 534 13 HOH HOH . O 7 HOH A 35 535 43 HOH HOH . O 7 HOH A 36 536 38 HOH HOH . O 7 HOH A 37 537 54 HOH HOH . O 7 HOH A 38 538 49 HOH HOH . O 7 HOH A 39 539 47 HOH HOH . O 7 HOH A 40 540 56 HOH HOH . O 7 HOH A 41 541 32 HOH HOH . O 7 HOH A 42 542 35 HOH HOH . O 7 HOH A 43 543 22 HOH HOH . O 7 HOH A 44 544 74 HOH HOH . O 7 HOH A 45 545 23 HOH HOH . O 7 HOH A 46 546 3 HOH HOH . O 7 HOH A 47 547 60 HOH HOH . O 7 HOH A 48 548 85 HOH HOH . O 7 HOH A 49 549 24 HOH HOH . O 7 HOH A 50 550 52 HOH HOH . O 7 HOH A 51 551 64 HOH HOH . O 7 HOH A 52 552 58 HOH HOH . O 7 HOH A 53 553 57 HOH HOH . O 7 HOH A 54 554 44 HOH HOH . O 7 HOH A 55 555 88 HOH HOH . O 7 HOH A 56 556 30 HOH HOH . O 7 HOH A 57 557 29 HOH HOH . O 7 HOH A 58 558 21 HOH HOH . O 7 HOH A 59 559 7 HOH HOH . O 7 HOH A 60 560 50 HOH HOH . O 7 HOH A 61 561 15 HOH HOH . O 7 HOH A 62 562 39 HOH HOH . O 7 HOH A 63 563 59 HOH HOH . O 7 HOH A 64 564 84 HOH HOH . O 7 HOH A 65 565 27 HOH HOH . O 7 HOH A 66 566 14 HOH HOH . O 7 HOH A 67 567 10 HOH HOH . O 7 HOH A 68 568 9 HOH HOH . O 7 HOH A 69 569 71 HOH HOH . O 7 HOH A 70 570 89 HOH HOH . O 7 HOH A 71 571 2 HOH HOH . O 7 HOH A 72 572 4 HOH HOH . O 7 HOH A 73 573 68 HOH HOH . O 7 HOH A 74 574 65 HOH HOH . O 7 HOH A 75 575 81 HOH HOH . O 7 HOH A 76 576 48 HOH HOH . O 7 HOH A 77 577 69 HOH HOH . O 7 HOH A 78 578 16 HOH HOH . O 7 HOH A 79 579 66 HOH HOH . O 7 HOH A 80 580 37 HOH HOH . O 7 HOH A 81 581 18 HOH HOH . O 7 HOH A 82 582 12 HOH HOH . O 7 HOH A 83 583 11 HOH HOH . O 7 HOH A 84 584 72 HOH HOH . O 7 HOH A 85 585 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 XYR . . . B 2 47.565 32.773 1.067 1 42.2 ? C1 XYR 401 A 1 HETATM 2 C C2 XYR . . . B 2 48.672 33.724 0.693 1 46.13 ? C2 XYR 401 A 1 HETATM 3 C C3 XYR . . . B 2 49.908 33.284 0.187 1 49.95 ? C3 XYR 401 A 1 HETATM 4 C C4 XYR . . . B 2 50.177 31.823 0 1 51.52 ? C4 XYR 401 A 1 HETATM 5 C C6 XYR . . . B 2 51.26 29.799 0.874 1 44.84 ? C6 XYR 401 A 1 HETATM 6 C C9 XYR . . . B 2 53.569 29.738 -0.215 1 42.08 ? C9 XYR 401 A 1 HETATM 7 C C10 XYR . . . B 2 54.421 29.341 -1.242 1 42.45 ? C10 XYR 401 A 1 HETATM 8 C C11 XYR . . . B 2 55.853 29.71 -1.204 1 53.84 ? C11 XYR 401 A 1 HETATM 9 C C12 XYR . . . B 2 56.462 30.606 -0.352 1 59.07 ? C12 XYR 401 A 1 HETATM 10 C C14 XYR . . . B 2 58.802 31.418 -0.084 1 84.02 ? C14 XYR 401 A 1 HETATM 11 N N17 XYR . . . B 2 58.07 29.799 -1.695 1 60.04 ? N17 XYR 401 A 1 HETATM 12 C C20 XYR . . . B 2 52.565 28.288 -2.357 1 43.99 ? C20 XYR 401 A 1 HETATM 13 C C18 XYR . . . B 2 56.908 29.247 -2.01 1 60.56 ? C18 XYR 401 A 1 HETATM 14 C C19 XYR . . . B 2 53.917 28.613 -2.314 1 47.83 ? C19 XYR 401 A 1 HETATM 15 C C21 XYR . . . B 2 52.014 27.557 -3.523 1 47.42 ? C21 XYR 401 A 1 HETATM 16 C C22 XYR . . . B 2 50.717 27.129 -3.704 1 66.32 ? C22 XYR 401 A 1 HETATM 17 C C24 XYR . . . B 2 49.486 25.922 -5.531 1 71.82 ? C24 XYR 401 A 1 HETATM 18 C C26 XYR . . . B 2 52.659 27.162 -4.705 1 48.11 ? C26 XYR 401 A 1 HETATM 19 C C27 XYR . . . B 2 51.726 28.691 -1.322 1 41.17 ? C27 XYR 401 A 1 HETATM 20 C C29 XYR . . . B 2 50.896 34.213 -0.156 1 36.86 ? C29 XYR 401 A 1 HETATM 21 C C30 XYR . . . B 2 50.662 35.572 0.001 1 44.69 ? C30 XYR 401 A 1 HETATM 22 C C32 XYR . . . B 2 52.849 36.078 -0.855 1 65.81 ? C32 XYR 401 A 1 HETATM 23 C C33 XYR . . . B 2 53.531 37.301 -1.377 1 49.3 ? C33 XYR 401 A 1 HETATM 24 C C35 XYR . . . B 2 53.422 39.355 -0.015 1 53.09 ? C35 XYR 401 A 1 HETATM 25 C C36 XYR . . . B 2 55.599 38.434 -0.647 1 44.26 ? C36 XYR 401 A 1 HETATM 26 C C37 XYR . . . B 2 49.452 36.015 0.499 1 45.99 ? C37 XYR 401 A 1 HETATM 27 C C38 XYR . . . B 2 48.477 35.096 0.837 1 43.44 ? C38 XYR 401 A 1 HETATM 28 C C7 XYR . . . B 2 51.776 29.37 2.243 1 36.34 ? C7 XYR 401 A 1 HETATM 29 C C8 XYR . . . B 2 52.216 29.419 -0.242 1 49.78 ? C8 XYR 401 A 1 HETATM 30 F F15 XYR . . . B 2 58.514 32.729 -0.223 1 110.71 ? F15 XYR 401 A 1 HETATM 31 F F16 XYR . . . B 2 59.953 31.229 -0.761 1 98.47 ? F16 XYR 401 A 1 HETATM 32 N N13 XYR . . . B 2 57.765 30.634 -0.669 1 65.64 ? N13 XYR 401 A 1 HETATM 33 N N23 XYR . . . B 2 50.65 26.538 -4.902 1 72.35 ? N23 XYR 401 A 1 HETATM 34 N N25 XYR . . . B 2 51.84 26.545 -5.546 1 67.87 ? N25 XYR 401 A 1 HETATM 35 N N34 XYR . . . B 2 54.187 38.113 -0.308 1 37.72 ? N34 XYR 401 A 1 HETATM 36 N N5 XYR . . . B 2 50.972 31.236 0.905 1 45.31 ? N5 XYR 401 A 1 HETATM 37 O O28 XYR . . . B 2 49.686 31.204 -0.939 1 49.97 ? O28 XYR 401 A 1 HETATM 38 O O31 XYR . . . B 2 51.593 36.522 -0.327 1 39.38 ? O31 XYR 401 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 38 #