data_8UV3 # _model_server_result.job_id Y9APwn-42dZVOVM3tDeS-g _model_server_result.datetime_utc '2024-11-22 13:05:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uv3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 8UV3 # _exptl.entry_id 8UV3 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UV3 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UV3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLN 424 A GLN 438 1_555 D MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc2 A OD2 ASP 426 A ASP 440 1_555 D MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc3 D MG MG . A MG 601 1_555 G O HOH . A HOH 755 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.851 ? metalc ? metalc4 B OD2 ASP 426 B ASP 440 1_555 E MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc5 E MG MG . B MG 601 1_555 H O HOH . B HOH 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.904 ? metalc ? metalc6 E MG MG . B MG 601 1_555 H O HOH . B HOH 793 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc7 C OE1 GLN 424 C GLN 438 1_555 F MG MG . C MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc8 F MG MG . C MG 601 1_555 I O HOH . C HOH 742 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.877 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8UV3 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 MG A 1 601 533 MG MG . E 2 MG B 1 601 532 MG MG . F 2 MG C 1 601 532 MG MG . G 3 HOH A 1 701 765 HOH HOH . G 3 HOH A 2 702 719 HOH HOH . G 3 HOH A 3 703 762 HOH HOH . G 3 HOH A 4 704 804 HOH HOH . G 3 HOH A 5 705 884 HOH HOH . G 3 HOH A 6 706 701 HOH HOH . G 3 HOH A 7 707 731 HOH HOH . G 3 HOH A 8 708 789 HOH HOH . G 3 HOH A 9 709 737 HOH HOH . G 3 HOH A 10 710 833 HOH HOH . G 3 HOH A 11 711 732 HOH HOH . G 3 HOH A 12 712 809 HOH HOH . G 3 HOH A 13 713 721 HOH HOH . G 3 HOH A 14 714 711 HOH HOH . G 3 HOH A 15 715 751 HOH HOH . G 3 HOH A 16 716 706 HOH HOH . G 3 HOH A 17 717 726 HOH HOH . G 3 HOH A 18 718 770 HOH HOH . G 3 HOH A 19 719 825 HOH HOH . G 3 HOH A 20 720 827 HOH HOH . G 3 HOH A 21 721 759 HOH HOH . G 3 HOH A 22 722 733 HOH HOH . G 3 HOH A 23 723 723 HOH HOH . G 3 HOH A 24 724 718 HOH HOH . G 3 HOH A 25 725 757 HOH HOH . G 3 HOH A 26 726 735 HOH HOH . G 3 HOH A 27 727 756 HOH HOH . G 3 HOH A 28 728 769 HOH HOH . G 3 HOH A 29 729 713 HOH HOH . G 3 HOH A 30 730 724 HOH HOH . G 3 HOH A 31 731 838 HOH HOH . G 3 HOH A 32 732 761 HOH HOH . G 3 HOH A 33 733 739 HOH HOH . G 3 HOH A 34 734 841 HOH HOH . G 3 HOH A 35 735 752 HOH HOH . G 3 HOH A 36 736 734 HOH HOH . G 3 HOH A 37 737 868 HOH HOH . G 3 HOH A 38 738 880 HOH HOH . G 3 HOH A 39 739 790 HOH HOH . G 3 HOH A 40 740 818 HOH HOH . G 3 HOH A 41 741 774 HOH HOH . G 3 HOH A 42 742 792 HOH HOH . G 3 HOH A 43 743 816 HOH HOH . G 3 HOH A 44 744 831 HOH HOH . G 3 HOH A 45 745 794 HOH HOH . G 3 HOH A 46 746 758 HOH HOH . G 3 HOH A 47 747 791 HOH HOH . G 3 HOH A 48 748 847 HOH HOH . G 3 HOH A 49 749 872 HOH HOH . G 3 HOH A 50 750 742 HOH HOH . G 3 HOH A 51 751 811 HOH HOH . G 3 HOH A 52 752 779 HOH HOH . G 3 HOH A 53 753 815 HOH HOH . G 3 HOH A 54 754 824 HOH HOH . G 3 HOH A 55 755 708 HOH HOH . G 3 HOH A 56 756 738 HOH HOH . G 3 HOH A 57 757 817 HOH HOH . G 3 HOH A 58 758 839 HOH HOH . G 3 HOH A 59 759 858 HOH HOH . G 3 HOH A 60 760 716 HOH HOH . G 3 HOH A 61 761 749 HOH HOH . G 3 HOH A 62 762 710 HOH HOH . G 3 HOH A 63 763 814 HOH HOH . G 3 HOH A 64 764 834 HOH HOH . G 3 HOH A 65 765 798 HOH HOH . G 3 HOH A 66 766 784 HOH HOH . G 3 HOH A 67 767 881 HOH HOH . G 3 HOH A 68 768 750 HOH HOH . G 3 HOH A 69 769 820 HOH HOH . G 3 HOH A 70 770 801 HOH HOH . G 3 HOH A 71 771 807 HOH HOH . G 3 HOH A 72 772 773 HOH HOH . G 3 HOH A 73 773 832 HOH HOH . G 3 HOH A 74 774 849 HOH HOH . G 3 HOH A 75 775 799 HOH HOH . G 3 HOH A 76 776 862 HOH HOH . G 3 HOH A 77 777 704 HOH HOH . G 3 HOH A 78 778 812 HOH HOH . G 3 HOH A 79 779 745 HOH HOH . G 3 HOH A 80 780 793 HOH HOH . G 3 HOH A 81 781 810 HOH HOH . G 3 HOH A 82 782 796 HOH HOH . G 3 HOH A 83 783 851 HOH HOH . G 3 HOH A 84 784 836 HOH HOH . G 3 HOH A 85 785 781 HOH HOH . G 3 HOH A 86 786 768 HOH HOH . G 3 HOH A 87 787 866 HOH HOH . G 3 HOH A 88 788 730 HOH HOH . G 3 HOH A 89 789 712 HOH HOH . G 3 HOH A 90 790 871 HOH HOH . G 3 HOH A 91 791 863 HOH HOH . G 3 HOH A 92 792 755 HOH HOH . H 3 HOH B 1 701 765 HOH HOH . H 3 HOH B 2 702 820 HOH HOH . H 3 HOH B 3 703 733 HOH HOH . H 3 HOH B 4 704 725 HOH HOH . H 3 HOH B 5 705 850 HOH HOH . H 3 HOH B 6 706 709 HOH HOH . H 3 HOH B 7 707 751 HOH HOH . H 3 HOH B 8 708 743 HOH HOH . H 3 HOH B 9 709 785 HOH HOH . H 3 HOH B 10 710 790 HOH HOH . H 3 HOH B 11 711 752 HOH HOH . H 3 HOH B 12 712 735 HOH HOH . H 3 HOH B 13 713 715 HOH HOH . H 3 HOH B 14 714 741 HOH HOH . H 3 HOH B 15 715 701 HOH HOH . H 3 HOH B 16 716 813 HOH HOH . H 3 HOH B 17 717 800 HOH HOH . H 3 HOH B 18 718 723 HOH HOH . H 3 HOH B 19 719 804 HOH HOH . H 3 HOH B 20 720 825 HOH HOH . H 3 HOH B 21 721 789 HOH HOH . H 3 HOH B 22 722 722 HOH HOH . H 3 HOH B 23 723 753 HOH HOH . H 3 HOH B 24 724 738 HOH HOH . H 3 HOH B 25 725 873 HOH HOH . H 3 HOH B 26 726 749 HOH HOH . H 3 HOH B 27 727 774 HOH HOH . H 3 HOH B 28 728 750 HOH HOH . H 3 HOH B 29 729 739 HOH HOH . H 3 HOH B 30 730 721 HOH HOH . H 3 HOH B 31 731 757 HOH HOH . H 3 HOH B 32 732 726 HOH HOH . H 3 HOH B 33 733 710 HOH HOH . H 3 HOH B 34 734 734 HOH HOH . H 3 HOH B 35 735 716 HOH HOH . H 3 HOH B 36 736 731 HOH HOH . H 3 HOH B 37 737 821 HOH HOH . H 3 HOH B 38 738 718 HOH HOH . H 3 HOH B 39 739 814 HOH HOH . H 3 HOH B 40 740 706 HOH HOH . H 3 HOH B 41 741 707 HOH HOH . H 3 HOH B 42 742 777 HOH HOH . H 3 HOH B 43 743 824 HOH HOH . H 3 HOH B 44 744 791 HOH HOH . H 3 HOH B 45 745 759 HOH HOH . H 3 HOH B 46 746 835 HOH HOH . H 3 HOH B 47 747 854 HOH HOH . H 3 HOH B 48 748 798 HOH HOH . H 3 HOH B 49 749 817 HOH HOH . H 3 HOH B 50 750 711 HOH HOH . H 3 HOH B 51 751 793 HOH HOH . H 3 HOH B 52 752 742 HOH HOH . H 3 HOH B 53 753 770 HOH HOH . H 3 HOH B 54 754 885 HOH HOH . H 3 HOH B 55 755 758 HOH HOH . H 3 HOH B 56 756 809 HOH HOH . H 3 HOH B 57 757 745 HOH HOH . H 3 HOH B 58 758 843 HOH HOH . H 3 HOH B 59 759 779 HOH HOH . H 3 HOH B 60 760 865 HOH HOH . H 3 HOH B 61 761 872 HOH HOH . H 3 HOH B 62 762 832 HOH HOH . H 3 HOH B 63 763 823 HOH HOH . H 3 HOH B 64 764 827 HOH HOH . H 3 HOH B 65 765 784 HOH HOH . H 3 HOH B 66 766 880 HOH HOH . H 3 HOH B 67 767 796 HOH HOH . H 3 HOH B 68 768 830 HOH HOH . H 3 HOH B 69 769 841 HOH HOH . H 3 HOH B 70 770 802 HOH HOH . H 3 HOH B 71 771 810 HOH HOH . H 3 HOH B 72 772 834 HOH HOH . H 3 HOH B 73 773 704 HOH HOH . H 3 HOH B 74 774 746 HOH HOH . H 3 HOH B 75 775 806 HOH HOH . H 3 HOH B 76 776 797 HOH HOH . H 3 HOH B 77 777 815 HOH HOH . H 3 HOH B 78 778 724 HOH HOH . H 3 HOH B 79 779 883 HOH HOH . H 3 HOH B 80 780 805 HOH HOH . H 3 HOH B 81 781 811 HOH HOH . H 3 HOH B 82 782 862 HOH HOH . H 3 HOH B 83 783 801 HOH HOH . H 3 HOH B 84 784 822 HOH HOH . H 3 HOH B 85 785 754 HOH HOH . H 3 HOH B 86 786 808 HOH HOH . H 3 HOH B 87 787 747 HOH HOH . H 3 HOH B 88 788 881 HOH HOH . H 3 HOH B 89 789 839 HOH HOH . H 3 HOH B 90 790 847 HOH HOH . H 3 HOH B 91 791 869 HOH HOH . H 3 HOH B 92 792 829 HOH HOH . H 3 HOH B 93 793 708 HOH HOH . H 3 HOH B 94 794 764 HOH HOH . H 3 HOH B 95 795 730 HOH HOH . H 3 HOH B 96 796 866 HOH HOH . H 3 HOH B 97 797 744 HOH HOH . H 3 HOH B 98 798 828 HOH HOH . H 3 HOH B 99 799 705 HOH HOH . H 3 HOH B 100 800 803 HOH HOH . H 3 HOH B 101 801 729 HOH HOH . H 3 HOH B 102 802 891 HOH HOH . I 3 HOH C 1 701 719 HOH HOH . I 3 HOH C 2 702 741 HOH HOH . I 3 HOH C 3 703 750 HOH HOH . I 3 HOH C 4 704 721 HOH HOH . I 3 HOH C 5 705 738 HOH HOH . I 3 HOH C 6 706 733 HOH HOH . I 3 HOH C 7 707 879 HOH HOH . I 3 HOH C 8 708 885 HOH HOH . I 3 HOH C 9 709 739 HOH HOH . I 3 HOH C 10 710 813 HOH HOH . I 3 HOH C 11 711 810 HOH HOH . I 3 HOH C 12 712 759 HOH HOH . I 3 HOH C 13 713 850 HOH HOH . I 3 HOH C 14 714 718 HOH HOH . I 3 HOH C 15 715 779 HOH HOH . I 3 HOH C 16 716 770 HOH HOH . I 3 HOH C 17 717 807 HOH HOH . I 3 HOH C 18 718 785 HOH HOH . I 3 HOH C 19 719 723 HOH HOH . I 3 HOH C 20 720 837 HOH HOH . I 3 HOH C 21 721 839 HOH HOH . I 3 HOH C 22 722 826 HOH HOH . I 3 HOH C 23 723 831 HOH HOH . I 3 HOH C 24 724 716 HOH HOH . I 3 HOH C 25 725 734 HOH HOH . I 3 HOH C 26 726 726 HOH HOH . I 3 HOH C 27 727 752 HOH HOH . I 3 HOH C 28 728 786 HOH HOH . I 3 HOH C 29 729 773 HOH HOH . I 3 HOH C 30 730 774 HOH HOH . I 3 HOH C 31 731 857 HOH HOH . I 3 HOH C 32 732 742 HOH HOH . I 3 HOH C 33 733 830 HOH HOH . I 3 HOH C 34 734 804 HOH HOH . I 3 HOH C 35 735 869 HOH HOH . I 3 HOH C 36 736 711 HOH HOH . I 3 HOH C 37 737 843 HOH HOH . I 3 HOH C 38 738 875 HOH HOH . I 3 HOH C 39 739 735 HOH HOH . I 3 HOH C 40 740 834 HOH HOH . I 3 HOH C 41 741 706 HOH HOH . I 3 HOH C 42 742 709 HOH HOH . I 3 HOH C 43 743 717 HOH HOH . I 3 HOH C 44 744 824 HOH HOH . I 3 HOH C 45 745 796 HOH HOH . I 3 HOH C 46 746 841 HOH HOH . I 3 HOH C 47 747 862 HOH HOH . I 3 HOH C 48 748 704 HOH HOH . I 3 HOH C 49 749 756 HOH HOH . I 3 HOH C 50 750 745 HOH HOH . I 3 HOH C 51 751 872 HOH HOH . I 3 HOH C 52 752 818 HOH HOH . I 3 HOH C 53 753 835 HOH HOH . I 3 HOH C 54 754 791 HOH HOH . I 3 HOH C 55 755 789 HOH HOH . I 3 HOH C 56 756 822 HOH HOH . I 3 HOH C 57 757 812 HOH HOH . I 3 HOH C 58 758 798 HOH HOH . I 3 HOH C 59 759 809 HOH HOH . I 3 HOH C 60 760 751 HOH HOH . I 3 HOH C 61 761 815 HOH HOH . I 3 HOH C 62 762 827 HOH HOH . I 3 HOH C 63 763 778 HOH HOH . I 3 HOH C 64 764 880 HOH HOH . I 3 HOH C 65 765 763 HOH HOH . I 3 HOH C 66 766 870 HOH HOH . I 3 HOH C 67 767 737 HOH HOH . I 3 HOH C 68 768 747 HOH HOH . I 3 HOH C 69 769 725 HOH HOH . I 3 HOH C 70 770 876 HOH HOH . I 3 HOH C 71 771 728 HOH HOH . I 3 HOH C 72 772 801 HOH HOH . I 3 HOH C 73 773 847 HOH HOH . I 3 HOH C 74 774 814 HOH HOH . I 3 HOH C 75 775 757 HOH HOH . I 3 HOH C 76 776 765 HOH HOH . I 3 HOH C 77 777 769 HOH HOH . I 3 HOH C 78 778 863 HOH HOH . I 3 HOH C 79 779 776 HOH HOH . I 3 HOH C 80 780 788 HOH HOH . I 3 HOH C 81 781 790 HOH HOH . I 3 HOH C 82 782 853 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 345.4 _atom_site.Cartn_y 330.955 _atom_site.Cartn_z 479.652 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 63.85 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #