data_8UW2 # _model_server_result.job_id P0kZhuGUxoBdbSIctmnQNw _model_server_result.datetime_utc '2024-10-18 02:30:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uw2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 8UW2 # _exptl.entry_id 8UW2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 540.614 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{2-[({4-[(2P)-2-(2-aminopyridin-3-yl)-5-phenyl-3H-imidazo[4,5-b]pyridin-3-yl]phenyl}methyl)amino]ethyl}-2-hydroxybenzaldehyde _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UW2 _cell.length_a 76.008 _cell.length_b 87.632 _cell.length_c 197.246 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UW2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 22 B CYS 22 1_555 B SG CYS 95 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? covale ? covale1 A NZ LYS 16 A LYS 17 1_555 D C25 XOO . A XOO 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? # _chem_comp.formula 'C33 H28 N6 O2' _chem_comp.formula_weight 540.614 _chem_comp.id XOO _chem_comp.mon_nstd_flag . _chem_comp.name 4-{2-[({4-[(2P)-2-(2-aminopyridin-3-yl)-5-phenyl-3H-imidazo[4,5-b]pyridin-3-yl]phenyl}methyl)amino]ethyl}-2-hydroxybenzaldehyde _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 XOO sing 389 n n C1 N2 XOO doub 390 n y C1 C5 XOO sing 391 n y N2 C2 XOO sing 392 n y C2 C3 XOO doub 393 n y C3 C4 XOO sing 394 n y C4 C5 XOO doub 395 n y C5 C6 XOO sing 396 n n C6 N3 XOO doub 397 n y C6 N5 XOO sing 398 n y N3 C7 XOO sing 399 n y C7 C8 XOO doub 400 n y C7 C11 XOO sing 401 n y C8 C9 XOO sing 402 n y C9 C10 XOO doub 403 n y C10 N4 XOO sing 404 n y C10 C28 XOO sing 405 n n N4 C11 XOO doub 406 n y C11 N5 XOO sing 407 n y N5 C12 XOO sing 408 n n C12 C13 XOO doub 409 n y C12 C17 XOO sing 410 n y C13 C14 XOO sing 411 n y C14 C15 XOO doub 412 n y C15 C16 XOO sing 413 n y C15 C18 XOO sing 414 n n C16 C17 XOO doub 415 n y C18 N6 XOO sing 416 n n N6 C19 XOO sing 417 n n C19 C20 XOO sing 418 n n C20 C21 XOO sing 419 n n C21 C22 XOO doub 420 n y C21 C27 XOO sing 421 n y C22 C23 XOO sing 422 n y C23 C24 XOO doub 423 n y C24 C25 XOO sing 424 n n C24 C26 XOO sing 425 n y C26 O2 XOO sing 426 n n C26 C27 XOO doub 427 n y C28 C29 XOO doub 428 n y C28 C33 XOO sing 429 n y C29 C30 XOO sing 430 n y C30 C31 XOO doub 431 n y C31 C32 XOO sing 432 n y C32 C33 XOO doub 433 n y N1 H1 XOO sing 434 n n N1 H2 XOO sing 435 n n C2 H3 XOO sing 436 n n C3 H4 XOO sing 437 n n C22 H19 XOO sing 438 n n C4 H5 XOO sing 439 n n C13 H8 XOO sing 440 n n C14 H9 XOO sing 441 n n C16 H10 XOO sing 442 n n C17 H11 XOO sing 443 n n C18 H12 XOO sing 444 n n C18 H13 XOO sing 445 n n C19 H15 XOO sing 446 n n C19 H16 XOO sing 447 n n C20 H18 XOO sing 448 n n C20 H17 XOO sing 449 n n C23 H20 XOO sing 450 n n C25 H21 XOO sing 451 n n C27 H23 XOO sing 452 n n C29 H24 XOO sing 453 n n C30 H25 XOO sing 454 n n C31 H26 XOO sing 455 n n C32 H27 XOO sing 456 n n C33 H28 XOO sing 457 n n C8 H6 XOO sing 458 n n C9 H7 XOO sing 459 n n N6 H14 XOO sing 460 n n O2 H22 XOO sing 461 n n C25 O1 XOO doub 462 n n # _atom_sites.entry_id 8UW2 _atom_sites.fract_transf_matrix[1][1] 0.013157 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011411 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00507 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO A 1 501 503 EDO EDO . D 4 XOO A 1 502 504 XOO 286 . E 3 EDO A 1 503 505 EDO EDO . F 5 SO4 A 1 504 1 SO4 SO4 . G 5 SO4 A 1 505 2 SO4 SO4 . H 5 SO4 A 1 506 3 SO4 SO4 . I 5 SO4 A 1 507 4 SO4 SO4 . J 5 SO4 A 1 508 5 SO4 SO4 . K 5 SO4 B 1 201 6 SO4 SO4 . L 6 HOH A 1 601 120 HOH HOH . L 6 HOH A 2 602 60 HOH HOH . L 6 HOH A 3 603 99 HOH HOH . L 6 HOH A 4 604 47 HOH HOH . L 6 HOH A 5 605 80 HOH HOH . L 6 HOH A 6 606 64 HOH HOH . L 6 HOH A 7 607 128 HOH HOH . L 6 HOH A 8 608 13 HOH HOH . L 6 HOH A 9 609 76 HOH HOH . L 6 HOH A 10 610 79 HOH HOH . L 6 HOH A 11 611 8 HOH HOH . L 6 HOH A 12 612 6 HOH HOH . L 6 HOH A 13 613 68 HOH HOH . L 6 HOH A 14 614 4 HOH HOH . L 6 HOH A 15 615 46 HOH HOH . L 6 HOH A 16 616 35 HOH HOH . L 6 HOH A 17 617 69 HOH HOH . L 6 HOH A 18 618 23 HOH HOH . L 6 HOH A 19 619 135 HOH HOH . L 6 HOH A 20 620 2 HOH HOH . L 6 HOH A 21 621 5 HOH HOH . L 6 HOH A 22 622 3 HOH HOH . L 6 HOH A 23 623 16 HOH HOH . L 6 HOH A 24 624 43 HOH HOH . L 6 HOH A 25 625 15 HOH HOH . L 6 HOH A 26 626 41 HOH HOH . L 6 HOH A 27 627 1 HOH HOH . L 6 HOH A 28 628 19 HOH HOH . L 6 HOH A 29 629 10 HOH HOH . L 6 HOH A 30 630 25 HOH HOH . L 6 HOH A 31 631 29 HOH HOH . L 6 HOH A 32 632 7 HOH HOH . L 6 HOH A 33 633 22 HOH HOH . L 6 HOH A 34 634 9 HOH HOH . L 6 HOH A 35 635 58 HOH HOH . L 6 HOH A 36 636 38 HOH HOH . L 6 HOH A 37 637 12 HOH HOH . L 6 HOH A 38 638 49 HOH HOH . L 6 HOH A 39 639 18 HOH HOH . L 6 HOH A 40 640 71 HOH HOH . L 6 HOH A 41 641 121 HOH HOH . L 6 HOH A 42 642 55 HOH HOH . L 6 HOH A 43 643 118 HOH HOH . L 6 HOH A 44 644 107 HOH HOH . L 6 HOH A 45 645 44 HOH HOH . L 6 HOH A 46 646 61 HOH HOH . L 6 HOH A 47 647 63 HOH HOH . L 6 HOH A 48 648 85 HOH HOH . L 6 HOH A 49 649 26 HOH HOH . L 6 HOH A 50 650 81 HOH HOH . L 6 HOH A 51 651 57 HOH HOH . L 6 HOH A 52 652 56 HOH HOH . L 6 HOH A 53 653 45 HOH HOH . L 6 HOH A 54 654 34 HOH HOH . L 6 HOH A 55 655 24 HOH HOH . L 6 HOH A 56 656 65 HOH HOH . L 6 HOH A 57 657 31 HOH HOH . L 6 HOH A 58 658 21 HOH HOH . L 6 HOH A 59 659 17 HOH HOH . L 6 HOH A 60 660 53 HOH HOH . L 6 HOH A 61 661 28 HOH HOH . L 6 HOH A 62 662 124 HOH HOH . L 6 HOH A 63 663 74 HOH HOH . L 6 HOH A 64 664 98 HOH HOH . L 6 HOH A 65 665 39 HOH HOH . L 6 HOH A 66 666 73 HOH HOH . L 6 HOH A 67 667 84 HOH HOH . L 6 HOH A 68 668 105 HOH HOH . L 6 HOH A 69 669 131 HOH HOH . L 6 HOH A 70 670 72 HOH HOH . L 6 HOH A 71 671 83 HOH HOH . L 6 HOH A 72 672 33 HOH HOH . L 6 HOH A 73 673 108 HOH HOH . L 6 HOH A 74 674 130 HOH HOH . L 6 HOH A 75 675 70 HOH HOH . L 6 HOH A 76 676 132 HOH HOH . L 6 HOH A 77 677 123 HOH HOH . L 6 HOH A 78 678 40 HOH HOH . L 6 HOH A 79 679 129 HOH HOH . L 6 HOH A 80 680 127 HOH HOH . L 6 HOH A 81 681 119 HOH HOH . L 6 HOH A 82 682 106 HOH HOH . L 6 HOH A 83 683 50 HOH HOH . L 6 HOH A 84 684 103 HOH HOH . L 6 HOH A 85 685 92 HOH HOH . L 6 HOH A 86 686 51 HOH HOH . L 6 HOH A 87 687 82 HOH HOH . L 6 HOH A 88 688 134 HOH HOH . L 6 HOH A 89 689 133 HOH HOH . L 6 HOH A 90 690 100 HOH HOH . L 6 HOH A 91 691 101 HOH HOH . L 6 HOH A 92 692 77 HOH HOH . M 6 HOH B 1 301 59 HOH HOH . M 6 HOH B 2 302 42 HOH HOH . M 6 HOH B 3 303 91 HOH HOH . M 6 HOH B 4 304 14 HOH HOH . M 6 HOH B 5 305 93 HOH HOH . M 6 HOH B 6 306 27 HOH HOH . M 6 HOH B 7 307 48 HOH HOH . M 6 HOH B 8 308 95 HOH HOH . M 6 HOH B 9 309 110 HOH HOH . M 6 HOH B 10 310 36 HOH HOH . M 6 HOH B 11 311 20 HOH HOH . M 6 HOH B 12 312 136 HOH HOH . M 6 HOH B 13 313 96 HOH HOH . M 6 HOH B 14 314 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 XOO . . . D 4 10.8 7.407 -27.633 1 32.46 ? N1 XOO 502 A 1 HETATM 2 C C2 XOO . . . D 4 9.398 9.793 -29.794 1 22.63 ? C2 XOO 502 A 1 HETATM 3 C C3 XOO . . . D 4 10.225 10.885 -29.687 1 37.43 ? C3 XOO 502 A 1 HETATM 4 C C21 XOO . . . D 4 19.765 14.534 -34.519 1 61.95 ? C21 XOO 502 A 1 HETATM 5 C C22 XOO . . . D 4 19.082 14.469 -35.725 1 61.2 ? C22 XOO 502 A 1 HETATM 6 C C4 XOO . . . D 4 11.306 10.821 -28.833 1 29.61 ? C4 XOO 502 A 1 HETATM 7 C C5 XOO . . . D 4 11.558 9.655 -28.118 1 31.01 ? C5 XOO 502 A 1 HETATM 8 C C6 XOO . . . D 4 12.721 9.601 -27.207 1 31.66 ? C6 XOO 502 A 1 HETATM 9 C C1 XOO . . . D 4 10.64 8.566 -28.271 1 34.85 ? C1 XOO 502 A 1 HETATM 10 C C10 XOO . . . D 4 16.665 9.935 -25.179 1 31.2 ? C10 XOO 502 A 1 HETATM 11 C C11 XOO . . . D 4 14.77 9.909 -26.454 1 38.1 ? C11 XOO 502 A 1 HETATM 12 C C12 XOO . . . D 4 14.423 10.775 -28.714 1 28.77 ? C12 XOO 502 A 1 HETATM 13 C C13 XOO . . . D 4 14.129 10.18 -29.921 1 26.65 ? C13 XOO 502 A 1 HETATM 14 C C14 XOO . . . D 4 14.576 10.765 -31.088 1 28.03 ? C14 XOO 502 A 1 HETATM 15 C C15 XOO . . . D 4 15.367 11.896 -31.054 1 33.32 ? C15 XOO 502 A 1 HETATM 16 C C16 XOO . . . D 4 15.677 12.466 -29.83 1 32.61 ? C16 XOO 502 A 1 HETATM 17 C C17 XOO . . . D 4 15.201 11.913 -28.654 1 32.72 ? C17 XOO 502 A 1 HETATM 18 C C18 XOO . . . D 4 15.862 12.501 -32.339 1 35.37 ? C18 XOO 502 A 1 HETATM 19 C C19 XOO . . . D 4 17.776 13.465 -33.446 1 49.35 ? C19 XOO 502 A 1 HETATM 20 C C20 XOO . . . D 4 19.258 13.787 -33.309 1 63.06 ? C20 XOO 502 A 1 HETATM 21 C C23 XOO . . . D 4 19.529 15.133 -36.843 1 58.89 ? C23 XOO 502 A 1 HETATM 22 C C24 XOO . . . D 4 20.71 15.887 -36.78 1 65.05 ? C24 XOO 502 A 1 HETATM 23 C C25 XOO . . . D 4 21.199 16.595 -37.954 1 73.91 ? C25 XOO 502 A 1 HETATM 24 C C26 XOO . . . D 4 21.409 15.941 -35.566 1 61.45 ? C26 XOO 502 A 1 HETATM 25 C C27 XOO . . . D 4 20.941 15.265 -34.446 1 55.78 ? C27 XOO 502 A 1 HETATM 26 C C28 XOO . . . D 4 18.092 10.343 -25.088 1 33.72 ? C28 XOO 502 A 1 HETATM 27 C C29 XOO . . . D 4 18.999 9.665 -24.277 1 37.89 ? C29 XOO 502 A 1 HETATM 28 C C30 XOO . . . D 4 20.318 10.08 -24.19 1 38.24 ? C30 XOO 502 A 1 HETATM 29 C C31 XOO . . . D 4 20.755 11.183 -24.897 1 39.65 ? C31 XOO 502 A 1 HETATM 30 C C32 XOO . . . D 4 19.871 11.869 -25.704 1 38.55 ? C32 XOO 502 A 1 HETATM 31 C C33 XOO . . . D 4 18.549 11.457 -25.79 1 41.44 ? C33 XOO 502 A 1 HETATM 32 C C7 XOO . . . D 4 14.019 9.242 -25.515 1 33.01 ? C7 XOO 502 A 1 HETATM 33 C C8 XOO . . . D 4 14.639 8.903 -24.316 1 35.1 ? C8 XOO 502 A 1 HETATM 34 C C9 XOO . . . D 4 15.964 9.25 -24.154 1 36.46 ? C9 XOO 502 A 1 HETATM 35 N N2 XOO . . . D 4 9.589 8.647 -29.122 1 30.25 ? N2 XOO 502 A 1 HETATM 36 N N3 XOO . . . D 4 12.725 9.054 -26.001 1 32.46 ? N3 XOO 502 A 1 HETATM 37 N N4 XOO . . . D 4 16.055 10.262 -26.334 1 37.97 ? N4 XOO 502 A 1 HETATM 38 N N5 XOO . . . D 4 13.949 10.163 -27.518 1 33 ? N5 XOO 502 A 1 HETATM 39 N N6 XOO . . . D 4 17.309 12.523 -32.418 1 37.13 ? N6 XOO 502 A 1 HETATM 40 O O2 XOO . . . D 4 22.562 16.657 -35.457 1 71.32 ? O2 XOO 502 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #