data_8UW8 # _model_server_result.job_id FHq-FmCHEFE2_mRXCZy7IQ _model_server_result.datetime_utc '2024-10-24 04:33:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uw8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1102}' # _entry.id 8UW8 # _exptl.entry_id 8UW8 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UW8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UW8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 3 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 3 3 2 BMA NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C NAG 1 C 1 NAG A 1003 NAG 3 n C NAG 2 C 2 NAG A 1004 NAG 3 n C BMA 3 C 3 BMA A 1005 BMA # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 263 A CYS 263 1_555 A SG CYS 407 A CYS 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 494 A CYS 494 1_555 A SG CYS 501 A CYS 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 A SG CYS 684 A CYS 684 1_555 A SG CYS 927 A CYS 927 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 A SG CYS 849 A CYS 849 1_555 A SG CYS 859 A CYS 859 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 B SG CYS 61 B CYS 75 1_555 B SG CYS 89 B CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 B SG CYS 79 B CYS 93 1_555 B SG CYS 90 B CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf7 B SG CYS 102 B CYS 116 1_555 B SG CYS 120 B CYS 134 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf8 B SG CYS 105 B CYS 119 1_555 B SG CYS 111 B CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf9 B SG CYS 110 B CYS 124 1_555 B SG CYS 180 B CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf10 B SG CYS 117 B CYS 131 1_555 B SG CYS 159 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf11 B SG CYS 121 B CYS 135 1_555 B SG CYS 155 B CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? covale ? covale1 A ND2 ASN 515 A ASN 515 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.451 ? covale ? covale2 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 ? covale ? covale3 C O4 NAG . C NAG 2 1_555 C C1 BMA . C BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? metalc ? metalc1 A OD1 ASN 630 A ASN 630 1_555 E CA CA . A CA 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc2 A O ASP 697 A ASP 697 1_555 E CA CA . A CA 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc3 A OD2 ASP 697 A ASP 697 1_555 E CA CA . A CA 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.127 ? metalc ? metalc4 A OE1 GLU 699 A GLU 699 1_555 E CA CA . A CA 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc5 A OE2 GLU 699 A GLU 699 1_555 E CA CA . A CA 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.029 ? metalc ? metalc6 E CA CA . A CA 1102 1_555 F O HOH . A HOH 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? metalc ? metalc7 E CA CA . A CA 1102 1_555 F O HOH . A HOH 1209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8UW8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG A 1 1101 942 NAG NAG . E 5 CA A 1 1102 1104 CA CA . F 6 HOH A 1 1201 101 HOH HOH . F 6 HOH A 2 1202 48 HOH HOH . F 6 HOH A 3 1203 1 HOH HOH . F 6 HOH A 4 1204 26 HOH HOH . F 6 HOH A 5 1205 59 HOH HOH . F 6 HOH A 6 1206 55 HOH HOH . F 6 HOH A 7 1207 75 HOH HOH . F 6 HOH A 8 1208 29 HOH HOH . F 6 HOH A 9 1209 102 HOH HOH . F 6 HOH A 10 1210 87 HOH HOH . F 6 HOH A 11 1211 86 HOH HOH . F 6 HOH A 12 1212 64 HOH HOH . F 6 HOH A 13 1213 39 HOH HOH . F 6 HOH A 14 1214 83 HOH HOH . F 6 HOH A 15 1215 15 HOH HOH . F 6 HOH A 16 1216 8 HOH HOH . F 6 HOH A 17 1217 69 HOH HOH . F 6 HOH A 18 1218 47 HOH HOH . F 6 HOH A 19 1219 40 HOH HOH . F 6 HOH A 20 1220 54 HOH HOH . F 6 HOH A 21 1221 49 HOH HOH . F 6 HOH A 22 1222 27 HOH HOH . F 6 HOH A 23 1223 32 HOH HOH . F 6 HOH A 24 1224 50 HOH HOH . F 6 HOH A 25 1225 9 HOH HOH . F 6 HOH A 26 1226 65 HOH HOH . F 6 HOH A 27 1227 41 HOH HOH . F 6 HOH A 28 1228 19 HOH HOH . F 6 HOH A 29 1229 16 HOH HOH . F 6 HOH A 30 1230 34 HOH HOH . F 6 HOH A 31 1231 31 HOH HOH . F 6 HOH A 32 1232 36 HOH HOH . F 6 HOH A 33 1233 76 HOH HOH . F 6 HOH A 34 1234 71 HOH HOH . F 6 HOH A 35 1235 30 HOH HOH . F 6 HOH A 36 1236 63 HOH HOH . F 6 HOH A 37 1237 11 HOH HOH . F 6 HOH A 38 1238 12 HOH HOH . F 6 HOH A 39 1239 28 HOH HOH . F 6 HOH A 40 1240 57 HOH HOH . F 6 HOH A 41 1241 73 HOH HOH . F 6 HOH A 42 1242 72 HOH HOH . F 6 HOH A 43 1243 52 HOH HOH . F 6 HOH A 44 1244 51 HOH HOH . F 6 HOH A 45 1245 21 HOH HOH . F 6 HOH A 46 1246 20 HOH HOH . F 6 HOH A 47 1247 62 HOH HOH . F 6 HOH A 48 1248 79 HOH HOH . F 6 HOH A 49 1249 10 HOH HOH . F 6 HOH A 50 1250 81 HOH HOH . F 6 HOH A 51 1251 18 HOH HOH . F 6 HOH A 52 1252 14 HOH HOH . F 6 HOH A 53 1253 24 HOH HOH . F 6 HOH A 54 1254 56 HOH HOH . F 6 HOH A 55 1255 43 HOH HOH . F 6 HOH A 56 1256 25 HOH HOH . F 6 HOH A 57 1257 13 HOH HOH . F 6 HOH A 58 1258 58 HOH HOH . F 6 HOH A 59 1259 61 HOH HOH . F 6 HOH A 60 1260 22 HOH HOH . F 6 HOH A 61 1261 33 HOH HOH . F 6 HOH A 62 1262 38 HOH HOH . F 6 HOH A 63 1263 70 HOH HOH . F 6 HOH A 64 1264 46 HOH HOH . F 6 HOH A 65 1265 67 HOH HOH . F 6 HOH A 66 1266 23 HOH HOH . F 6 HOH A 67 1267 5 HOH HOH . F 6 HOH A 68 1268 82 HOH HOH . F 6 HOH A 69 1269 2 HOH HOH . F 6 HOH A 70 1270 3 HOH HOH . F 6 HOH A 71 1271 60 HOH HOH . F 6 HOH A 72 1272 4 HOH HOH . G 6 HOH B 1 301 66 HOH HOH . G 6 HOH B 2 302 7 HOH HOH . G 6 HOH B 3 303 45 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 160.781 _atom_site.Cartn_y 162.528 _atom_site.Cartn_z 150.336 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 27 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #