data_8UXU # _model_server_result.job_id dGsDxXMwM9ZG3AD3pFSuXw _model_server_result.datetime_utc '2024-11-05 03:54:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uxu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":401}' # _entry.id 8UXU # _exptl.entry_id 8UXU _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 106.122 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description benzaldehyde _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UXU _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UXU _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 14-meric _pdbx_struct_assembly.oligomeric_count 14 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 U N N ? 2 V N N ? 2 W N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 165 A CYS 165 1_555 O C1' HBX . A HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale2 B SG CYS 165 B CYS 165 1_555 P C1' HBX . B HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale3 C SG CYS 165 C CYS 165 1_555 Q C1' HBX . C HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.765 ? covale ? covale4 D SG CYS 165 D CYS 165 1_555 R C1' HBX . D HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.764 ? covale ? covale5 E SG CYS 165 E CYS 165 1_555 S C1' HBX . E HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale6 F SG CYS 165 F CYS 165 1_555 T C1' HBX . F HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale7 G SG CYS 165 G CYS 165 1_555 U C1' HBX . G HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale8 H SG CYS 165 H CYS 165 1_555 V C1' HBX . H HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale9 I SG CYS 165 I CYS 165 1_555 W C1' HBX . I HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale10 J SG CYS 165 J CYS 165 1_555 X C1' HBX . J HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale11 K SG CYS 165 K CYS 165 1_555 Y C1' HBX . K HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale12 L SG CYS 165 L CYS 165 1_555 Z C1' HBX . L HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale13 M SG CYS 165 M CYS 165 1_555 AA C1' HBX . M HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale14 N SG CYS 165 N CYS 165 1_555 BA C1' HBX . N HBX 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.764 ? # _chem_comp.formula 'C7 H6 O' _chem_comp.formula_weight 106.122 _chem_comp.id HBX _chem_comp.mon_nstd_flag . _chem_comp.name benzaldehyde _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C1' HBX sing 129 n n C1' O1' HBX doub 130 n n C1' H1' HBX sing 131 n n C6 C1 HBX doub 132 n y C2 C1 HBX sing 133 n y C3 C2 HBX doub 134 n y C2 H2 HBX sing 135 n n C4 C3 HBX sing 136 n y C3 H3 HBX sing 137 n n C4 C5 HBX doub 138 n y C4 H4 HBX sing 139 n n C5 C6 HBX sing 140 n y C5 H5 HBX sing 141 n n C6 H6 HBX sing 142 n n # _atom_sites.entry_id 8UXU _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code O 2 HBX A 1 401 401 HBX LIG . P 2 HBX B 1 401 401 HBX LIG . Q 2 HBX C 1 401 401 HBX LIG . R 2 HBX D 1 401 401 HBX LIG . S 2 HBX E 1 401 401 HBX LIG . T 2 HBX F 1 401 401 HBX LIG . U 2 HBX G 1 401 401 HBX LIG . V 2 HBX H 1 401 401 HBX LIG . W 2 HBX I 1 401 401 HBX LIG . X 2 HBX J 1 401 401 HBX LIG . Y 2 HBX K 1 401 401 HBX LIG . Z 2 HBX L 1 401 401 HBX LIG . AA 2 HBX M 1 401 401 HBX LIG . BA 2 HBX N 1 401 401 HBX LIG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1' HBX . . . W 2 149.76 199.048 151.787 1 37.63 ? C1' HBX 401 I 1 HETATM 2 O O1' HBX . . . W 2 150.183 199.013 152.917 1 37.63 ? O1' HBX 401 I 1 HETATM 3 C C1 HBX . . . W 2 148.961 200.15 151.235 1 37.63 ? C1 HBX 401 I 1 HETATM 4 C C2 HBX . . . W 2 148.463 201.138 152.073 1 37.63 ? C2 HBX 401 I 1 HETATM 5 C C3 HBX . . . W 2 147.715 202.177 151.549 1 37.63 ? C3 HBX 401 I 1 HETATM 6 C C4 HBX . . . W 2 147.471 202.243 150.198 1 37.63 ? C4 HBX 401 I 1 HETATM 7 C C5 HBX . . . W 2 147.971 201.274 149.361 1 37.63 ? C5 HBX 401 I 1 HETATM 8 C C6 HBX . . . W 2 148.718 200.228 149.871 1 37.63 ? C6 HBX 401 I 1 HETATM 9 H H2 HBX . . . W 2 148.624 201.095 152.998 1 37.63 ? H2 HBX 401 I 1 HETATM 10 H H3 HBX . . . W 2 147.373 202.843 152.122 1 37.63 ? H3 HBX 401 I 1 HETATM 11 H H4 HBX . . . W 2 146.963 202.955 149.845 1 37.63 ? H4 HBX 401 I 1 HETATM 12 H H5 HBX . . . W 2 147.803 201.32 148.436 1 37.63 ? H5 HBX 401 I 1 HETATM 13 H H6 HBX . . . W 2 149.055 199.566 149.294 1 37.63 ? H6 HBX 401 I 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 13 #