data_8UZ2 # _model_server_result.job_id cdIApl-VnhJ04FwHNYyghw _model_server_result.datetime_utc '2024-11-21 10:04:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8uz2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":201}' # _entry.id 8UZ2 # _exptl.entry_id 8UZ2 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 244.311 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BIOTIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8UZ2 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8UZ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details nonameric _pdbx_struct_assembly.oligomeric_count 9 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 J N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B NZ LYS 43 B LYS 122 1_555 J C11 BTN . B BTN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale2 F NZ LYS 43 F LYS 122 1_555 O C11 BTN . F BTN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? metalc ? metalc1 C OE1 GLU 276 C GLU 276 1_555 L MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc2 C OE2 GLU 288 C GLU 288 1_555 L MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc3 K O3B ADP . C ADP 501 1_555 L MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc4 K O2A ADP . C ADP 501 1_555 L MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? metalc ? metalc5 D SG CYS 26 D CYS 27 1_555 M ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc6 D SG CYS 29 D CYS 30 1_555 M ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc7 D SG CYS 45 D CYS 46 1_555 M ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc8 D SG CYS 48 D CYS 49 1_555 M ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc9 G OE1 GLU 276 G GLU 276 1_555 Q MG MG . G MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? metalc ? metalc10 G OE2 GLU 288 G GLU 288 1_555 Q MG MG . G MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc11 P O3B ADP . G ADP 501 1_555 Q MG MG . G MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc12 P O2A ADP . G ADP 501 1_555 Q MG MG . G MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc13 H SG CYS 26 H CYS 27 1_555 R ZN ZN . H ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc14 H SG CYS 29 H CYS 30 1_555 R ZN ZN . H ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc15 H SG CYS 45 H CYS 46 1_555 R ZN ZN . H ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc16 H SG CYS 48 H CYS 49 1_555 R ZN ZN . H ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? # _chem_comp.formula 'C10 H16 N2 O3 S' _chem_comp.formula_weight 244.311 _chem_comp.id BTN _chem_comp.mon_nstd_flag . _chem_comp.name BIOTIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTN doub 205 n n C11 O12 BTN sing 206 n n C11 C10 BTN sing 207 n n O12 HO2 BTN sing 208 n n C10 C9 BTN sing 209 n n C10 H101 BTN sing 210 n n C10 H102 BTN sing 211 n n C9 C8 BTN sing 212 n n C9 H91 BTN sing 213 n n C9 H92 BTN sing 214 n n C8 C7 BTN sing 215 n n C8 H81 BTN sing 216 n n C8 H82 BTN sing 217 n n C7 C2 BTN sing 218 n n C7 H71 BTN sing 219 n n C7 H72 BTN sing 220 n n C2 S1 BTN sing 221 n n C2 C4 BTN sing 222 n n C2 H2 BTN sing 223 n n S1 C6 BTN sing 224 n n C6 C5 BTN sing 225 n n C6 H61 BTN sing 226 n n C6 H62 BTN sing 227 n n C5 N1 BTN sing 228 n n C5 C4 BTN sing 229 n n C5 H5 BTN sing 230 n n N1 C3 BTN sing 231 n n N1 HN1 BTN sing 232 n n C3 O3 BTN doub 233 n n C3 N2 BTN sing 234 n n N2 C4 BTN sing 235 n n N2 HN2 BTN sing 236 n n C4 H4 BTN sing 237 n n # _atom_sites.entry_id 8UZ2 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code J 5 BTN B 1 201 201 BTN BTN . K 6 ADP C 1 501 1000 ADP ADP . L 7 MG C 1 502 1004 MG MG . M 8 ZN D 1 301 305 ZN ZN . N 9 ACO D 1 302 306 ACO ACO . O 5 BTN F 1 201 201 BTN BTN . P 6 ADP G 1 501 1000 ADP ADP . Q 7 MG G 1 502 1004 MG MG . R 8 ZN H 1 301 305 ZN ZN . S 9 ACO H 1 302 306 ACO ACO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTN . . . O 5 195.283 287.714 206.17 1 143.45 ? C11 BTN 201 F 1 HETATM 2 O O11 BTN . . . O 5 194.236 287.317 205.619 1 144.85 ? O11 BTN 201 F 1 HETATM 3 C C10 BTN . . . O 5 196.624 287.204 205.597 1 139.31 ? C10 BTN 201 F 1 HETATM 4 C C9 BTN . . . O 5 197.134 287.933 204.363 1 143.88 ? C9 BTN 201 F 1 HETATM 5 C C8 BTN . . . O 5 196.581 289.347 204.235 1 144.6 ? C8 BTN 201 F 1 HETATM 6 C C7 BTN . . . O 5 197.22 290.137 203.1 1 147.62 ? C7 BTN 201 F 1 HETATM 7 C C2 BTN . . . O 5 198.444 290.929 203.521 1 150.72 ? C2 BTN 201 F 1 HETATM 8 S S1 BTN . . . O 5 198.781 292.349 202.428 1 165.72 ? S1 BTN 201 F 1 HETATM 9 C C6 BTN . . . O 5 200.383 292.554 203.248 1 140.3 ? C6 BTN 201 F 1 HETATM 10 C C5 BTN . . . O 5 200.95 291.138 203.406 1 148.32 ? C5 BTN 201 F 1 HETATM 11 N N1 BTN . . . O 5 201.617 290.66 202.225 1 149.2 ? N1 BTN 201 F 1 HETATM 12 C C3 BTN . . . O 5 201.03 289.576 201.659 1 146.79 ? C3 BTN 201 F 1 HETATM 13 O O3 BTN . . . O 5 201.404 288.992 200.656 1 139.58 ? O3 BTN 201 F 1 HETATM 14 N N2 BTN . . . O 5 199.945 289.264 202.42 1 149.74 ? N2 BTN 201 F 1 HETATM 15 C C4 BTN . . . O 5 199.762 290.14 203.549 1 150.93 ? C4 BTN 201 F 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 15 #