data_8V0D # _model_server_result.job_id YF8X3yN9iuBoYr6BgtI7LQ _model_server_result.datetime_utc '2024-12-26 19:24:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8v0d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1102}' # _entry.id 8V0D # _exptl.entry_id 8V0D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.03 _cell.angle_gamma 90 _cell.entry_id 8V0D _cell.length_a 28.985 _cell.length_b 65.119 _cell.length_c 135.931 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8V0D _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 194 B CYS 963 1_555 C ZN ZN . B ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc2 A SG CYS 197 B CYS 966 1_555 C ZN ZN . B ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc3 A SG CYS 208 B CYS 977 1_555 D ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc4 A ND1 HIS 210 B HIS 979 1_555 D ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc5 A SG CYS 213 B CYS 982 1_555 C ZN ZN . B ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc6 A SG CYS 216 B CYS 985 1_555 C ZN ZN . B ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc7 A SG CYS 223 B CYS 992 1_555 D ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc8 A SG CYS 226 B CYS 995 1_555 D ZN ZN . B ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc9 B NE2 HIS 33 A HIS 32 1_555 G ZN ZN . A ZN 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc10 B OD2 ASP 43 A ASP 42 1_555 G ZN ZN . A ZN 1103 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc11 B NE2 HIS 56 A HIS 55 1_555 G ZN ZN . A ZN 1103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc12 B SG CYS 112 A CYS 111 1_555 G ZN ZN . A ZN 1103 1_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc13 B SG CYS 194 A CYS 963 1_555 E ZN ZN . A ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc14 B SG CYS 197 A CYS 966 1_555 E ZN ZN . A ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc15 B SG CYS 208 A CYS 977 1_555 F ZN ZN . A ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc16 B ND1 HIS 210 A HIS 979 1_555 F ZN ZN . A ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc17 B SG CYS 213 A CYS 982 1_555 E ZN ZN . A ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc18 B SG CYS 216 A CYS 985 1_555 E ZN ZN . A ZN 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc19 B SG CYS 223 A CYS 992 1_555 F ZN ZN . A ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc20 B SG CYS 226 A CYS 995 1_555 F ZN ZN . A ZN 1102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8V0D _atom_sites.fract_transf_matrix[1][1] 0.034501 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001826 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015357 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN B 1 1101 1 ZN ZN . D 2 ZN B 1 1102 2 ZN ZN . E 2 ZN A 1 1101 3 ZN ZN . F 2 ZN A 1 1102 4 ZN ZN . G 2 ZN A 1 1103 5 ZN ZN . H 3 HOH B 1 1201 24 HOH HOH . H 3 HOH B 2 1202 30 HOH HOH . H 3 HOH B 3 1203 8 HOH HOH . H 3 HOH B 4 1204 39 HOH HOH . H 3 HOH B 5 1205 7 HOH HOH . H 3 HOH B 6 1206 21 HOH HOH . H 3 HOH B 7 1207 22 HOH HOH . H 3 HOH B 8 1208 1 HOH HOH . H 3 HOH B 9 1209 25 HOH HOH . H 3 HOH B 10 1210 3 HOH HOH . H 3 HOH B 11 1211 9 HOH HOH . H 3 HOH B 12 1212 17 HOH HOH . H 3 HOH B 13 1213 5 HOH HOH . H 3 HOH B 14 1214 36 HOH HOH . H 3 HOH B 15 1215 31 HOH HOH . H 3 HOH B 16 1216 2 HOH HOH . H 3 HOH B 17 1217 14 HOH HOH . H 3 HOH B 18 1218 20 HOH HOH . H 3 HOH B 19 1219 33 HOH HOH . H 3 HOH B 20 1220 12 HOH HOH . H 3 HOH B 21 1221 38 HOH HOH . H 3 HOH B 22 1222 4 HOH HOH . H 3 HOH B 23 1223 10 HOH HOH . H 3 HOH B 24 1224 11 HOH HOH . H 3 HOH B 25 1225 23 HOH HOH . H 3 HOH B 26 1226 6 HOH HOH . H 3 HOH B 27 1227 18 HOH HOH . H 3 HOH B 28 1228 35 HOH HOH . I 3 HOH A 1 1201 27 HOH HOH . I 3 HOH A 2 1202 15 HOH HOH . I 3 HOH A 3 1203 37 HOH HOH . I 3 HOH A 4 1204 16 HOH HOH . I 3 HOH A 5 1205 29 HOH HOH . I 3 HOH A 6 1206 19 HOH HOH . I 3 HOH A 7 1207 26 HOH HOH . I 3 HOH A 8 1208 13 HOH HOH . I 3 HOH A 9 1209 32 HOH HOH . I 3 HOH A 10 1210 28 HOH HOH . I 3 HOH A 11 1211 34 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 10.646 _atom_site.Cartn_y -9.094 _atom_site.Cartn_z 18.421 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 370 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #