data_8V42
#
_model_server_result.job_id            Ox--5o7s17_xkunQLxSwHQ 
_model_server_result.datetime_utc      '2025-01-25 15:10:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8v42 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":503}' 
#
_entry.id    8V42 
#
_exptl.entry_id    8V42 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              426.376 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (7S)-2-(3,5-difluoro-4-hydroxyanilino)-7-methyl-5-[(1,2-oxazol-5-yl)methyl]-8-(prop-2-yn-1-yl)-7,8-dihydropteridin-6(5H)-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8V42 
_cell.length_a            91.552 
_cell.length_b            96.615 
_cell.length_c            190.858 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8V42 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,L 1 1 
B,F,M 2 1 
C,G,H,N 3 1 
D,I,J,K,O 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 K N N 
#
_chem_comp.formula           'C20 H16 F2 N6 O3' 
_chem_comp.formula_weight    426.376 
_chem_comp.id                YD9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (7S)-2-(3,5-difluoro-4-hydroxyanilino)-7-methyl-5-[(1,2-oxazol-5-yl)methyl]-8-(prop-2-yn-1-yl)-7,8-dihydropteridin-6(5H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F2 C9 YD9 sing 396 n n 
N6 O3 YD9 sing 397 n y 
N6 C20 YD9 doub 398 n y 
C8 C9 YD9 doub 399 n y 
C8 C7 YD9 sing 400 n y 
N2 C4 YD9 doub 401 n y 
N2 C3 YD9 sing 402 n y 
O3 C18 YD9 sing 403 n y 
N5 C3 YD9 sing 404 n n 
N5 C7 YD9 sing 405 n n 
C4 C1 YD9 sing 406 n y 
C9 C10 YD9 sing 407 n y 
C3 N1 YD9 doub 408 n y 
C7 C12 YD9 doub 409 n y 
C20 C19 YD9 sing 410 n y 
C18 C17 YD9 sing 411 n n 
C18 C19 YD9 doub 412 n y 
C17 N3 YD9 sing 413 n n 
C1 N3 YD9 sing 414 n n 
C1 C2 YD9 doub 415 n y 
C10 O1 YD9 sing 416 n n 
C10 C11 YD9 doub 417 n y 
N1 C2 YD9 sing 418 n y 
C12 C11 YD9 sing 419 n y 
N3 C5 YD9 sing 420 n n 
C2 N4 YD9 sing 421 n n 
C11 F1 YD9 sing 422 n n 
C5 O2 YD9 doub 423 n n 
C5 C6 YD9 sing 424 n n 
N4 C6 YD9 sing 425 n n 
N4 C14 YD9 sing 426 n n 
C6 C13 YD9 sing 427 n n 
C14 C15 YD9 sing 428 n n 
C15 C16 YD9 trip 429 n n 
C4 H1 YD9 sing 430 n n 
C14 H2 YD9 sing 431 n n 
C14 H3 YD9 sing 432 n n 
C6 H4 YD9 sing 433 n n 
C8 H5 YD9 sing 434 n n 
C12 H6 YD9 sing 435 n n 
C13 H7 YD9 sing 436 n n 
C13 H8 YD9 sing 437 n n 
C13 H9 YD9 sing 438 n n 
N5 H10 YD9 sing 439 n n 
O1 H11 YD9 sing 440 n n 
C16 H12 YD9 sing 441 n n 
C17 H13 YD9 sing 442 n n 
C17 H14 YD9 sing 443 n n 
C19 H15 YD9 sing 444 n n 
C20 H16 YD9 sing 445 n n 
#
_atom_sites.entry_id                     8V42 
_atom_sites.fract_transf_matrix[1][1]    0.010923 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01035 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005239 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PEG A 1 501 501 PEG PEG . 
F 3 YD9 B 1 401 401 YD9 DRG . 
G 4 SO4 C 1 501 501 SO4 SO4 . 
H 4 SO4 C 1 502 502 SO4 SO4 . 
I 4 SO4 D 1 501 501 SO4 SO4 . 
J 4 SO4 D 1 502 502 SO4 SO4 . 
K 3 YD9 D 1 503 503 YD9 DRG . 
L 5 HOH A 1 601 69 HOH HOH . 
L 5 HOH A 2 602 98 HOH HOH . 
L 5 HOH A 3 603 31 HOH HOH . 
L 5 HOH A 4 604 115 HOH HOH . 
L 5 HOH A 5 605 82 HOH HOH . 
L 5 HOH A 6 606 7 HOH HOH . 
L 5 HOH A 7 607 140 HOH HOH . 
L 5 HOH A 8 608 96 HOH HOH . 
L 5 HOH A 9 609 81 HOH HOH . 
L 5 HOH A 10 610 70 HOH HOH . 
L 5 HOH A 11 611 108 HOH HOH . 
L 5 HOH A 12 612 128 HOH HOH . 
L 5 HOH A 13 613 21 HOH HOH . 
L 5 HOH A 14 614 76 HOH HOH . 
L 5 HOH A 15 615 13 HOH HOH . 
L 5 HOH A 16 616 142 HOH HOH . 
L 5 HOH A 17 617 141 HOH HOH . 
L 5 HOH A 18 618 29 HOH HOH . 
L 5 HOH A 19 619 136 HOH HOH . 
L 5 HOH A 20 620 121 HOH HOH . 
L 5 HOH A 21 621 88 HOH HOH . 
L 5 HOH A 22 622 99 HOH HOH . 
L 5 HOH A 23 623 80 HOH HOH . 
L 5 HOH A 24 624 94 HOH HOH . 
L 5 HOH A 25 625 9 HOH HOH . 
L 5 HOH A 26 626 87 HOH HOH . 
L 5 HOH A 27 627 60 HOH HOH . 
L 5 HOH A 28 628 129 HOH HOH . 
L 5 HOH A 29 629 8 HOH HOH . 
L 5 HOH A 30 630 116 HOH HOH . 
L 5 HOH A 31 631 126 HOH HOH . 
L 5 HOH A 32 632 53 HOH HOH . 
L 5 HOH A 33 633 78 HOH HOH . 
L 5 HOH A 34 634 44 HOH HOH . 
L 5 HOH A 35 635 127 HOH HOH . 
L 5 HOH A 36 636 92 HOH HOH . 
L 5 HOH A 37 637 67 HOH HOH . 
L 5 HOH A 38 638 101 HOH HOH . 
M 5 HOH B 1 501 144 HOH HOH . 
M 5 HOH B 2 502 33 HOH HOH . 
M 5 HOH B 3 503 143 HOH HOH . 
M 5 HOH B 4 504 79 HOH HOH . 
M 5 HOH B 5 505 43 HOH HOH . 
M 5 HOH B 6 506 132 HOH HOH . 
M 5 HOH B 7 507 71 HOH HOH . 
M 5 HOH B 8 508 58 HOH HOH . 
M 5 HOH B 9 509 30 HOH HOH . 
M 5 HOH B 10 510 35 HOH HOH . 
M 5 HOH B 11 511 86 HOH HOH . 
M 5 HOH B 12 512 110 HOH HOH . 
M 5 HOH B 13 513 131 HOH HOH . 
M 5 HOH B 14 514 57 HOH HOH . 
M 5 HOH B 15 515 83 HOH HOH . 
M 5 HOH B 16 516 20 HOH HOH . 
M 5 HOH B 17 517 17 HOH HOH . 
M 5 HOH B 18 518 37 HOH HOH . 
M 5 HOH B 19 519 59 HOH HOH . 
M 5 HOH B 20 520 75 HOH HOH . 
M 5 HOH B 21 521 10 HOH HOH . 
M 5 HOH B 22 522 100 HOH HOH . 
M 5 HOH B 23 523 135 HOH HOH . 
M 5 HOH B 24 524 64 HOH HOH . 
M 5 HOH B 25 525 91 HOH HOH . 
M 5 HOH B 26 526 48 HOH HOH . 
M 5 HOH B 27 527 15 HOH HOH . 
M 5 HOH B 28 528 106 HOH HOH . 
M 5 HOH B 29 529 6 HOH HOH . 
M 5 HOH B 30 530 117 HOH HOH . 
M 5 HOH B 31 531 50 HOH HOH . 
M 5 HOH B 32 532 39 HOH HOH . 
N 5 HOH C 1 601 28 HOH HOH . 
N 5 HOH C 2 602 25 HOH HOH . 
N 5 HOH C 3 603 42 HOH HOH . 
N 5 HOH C 4 604 41 HOH HOH . 
N 5 HOH C 5 605 34 HOH HOH . 
N 5 HOH C 6 606 104 HOH HOH . 
N 5 HOH C 7 607 24 HOH HOH . 
N 5 HOH C 8 608 85 HOH HOH . 
N 5 HOH C 9 609 66 HOH HOH . 
N 5 HOH C 10 610 54 HOH HOH . 
N 5 HOH C 11 611 137 HOH HOH . 
N 5 HOH C 12 612 45 HOH HOH . 
N 5 HOH C 13 613 65 HOH HOH . 
N 5 HOH C 14 614 19 HOH HOH . 
N 5 HOH C 15 615 102 HOH HOH . 
N 5 HOH C 16 616 122 HOH HOH . 
N 5 HOH C 17 617 74 HOH HOH . 
N 5 HOH C 18 618 134 HOH HOH . 
N 5 HOH C 19 619 72 HOH HOH . 
N 5 HOH C 20 620 120 HOH HOH . 
N 5 HOH C 21 621 18 HOH HOH . 
N 5 HOH C 22 622 89 HOH HOH . 
N 5 HOH C 23 623 125 HOH HOH . 
N 5 HOH C 24 624 63 HOH HOH . 
N 5 HOH C 25 625 27 HOH HOH . 
N 5 HOH C 26 626 84 HOH HOH . 
N 5 HOH C 27 627 95 HOH HOH . 
N 5 HOH C 28 628 51 HOH HOH . 
N 5 HOH C 29 629 105 HOH HOH . 
N 5 HOH C 30 630 38 HOH HOH . 
N 5 HOH C 31 631 109 HOH HOH . 
N 5 HOH C 32 632 40 HOH HOH . 
N 5 HOH C 33 633 90 HOH HOH . 
N 5 HOH C 34 634 14 HOH HOH . 
N 5 HOH C 35 635 114 HOH HOH . 
N 5 HOH C 36 636 119 HOH HOH . 
N 5 HOH C 37 637 118 HOH HOH . 
N 5 HOH C 38 638 73 HOH HOH . 
O 5 HOH D 1 601 145 HOH HOH . 
O 5 HOH D 2 602 46 HOH HOH . 
O 5 HOH D 3 603 62 HOH HOH . 
O 5 HOH D 4 604 4 HOH HOH . 
O 5 HOH D 5 605 22 HOH HOH . 
O 5 HOH D 6 606 3 HOH HOH . 
O 5 HOH D 7 607 68 HOH HOH . 
O 5 HOH D 8 608 47 HOH HOH . 
O 5 HOH D 9 609 16 HOH HOH . 
O 5 HOH D 10 610 138 HOH HOH . 
O 5 HOH D 11 611 32 HOH HOH . 
O 5 HOH D 12 612 107 HOH HOH . 
O 5 HOH D 13 613 26 HOH HOH . 
O 5 HOH D 14 614 124 HOH HOH . 
O 5 HOH D 15 615 36 HOH HOH . 
O 5 HOH D 16 616 61 HOH HOH . 
O 5 HOH D 17 617 97 HOH HOH . 
O 5 HOH D 18 618 1 HOH HOH . 
O 5 HOH D 19 619 49 HOH HOH . 
O 5 HOH D 20 620 113 HOH HOH . 
O 5 HOH D 21 621 2 HOH HOH . 
O 5 HOH D 22 622 123 HOH HOH . 
O 5 HOH D 23 623 56 HOH HOH . 
O 5 HOH D 24 624 139 HOH HOH . 
O 5 HOH D 25 625 111 HOH HOH . 
O 5 HOH D 26 626 23 HOH HOH . 
O 5 HOH D 27 627 77 HOH HOH . 
O 5 HOH D 28 628 5 HOH HOH . 
O 5 HOH D 29 629 133 HOH HOH . 
O 5 HOH D 30 630 52 HOH HOH . 
O 5 HOH D 31 631 112 HOH HOH . 
O 5 HOH D 32 632 130 HOH HOH . 
O 5 HOH D 33 633 103 HOH HOH . 
O 5 HOH D 34 634 93 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 YD9 . . . K 3 -23.669 4.242 3.353 1 76.14 0 C4 YD9 503 D 1 
HETATM 2 C C14 YD9 . . . K 3 -25.285 4.117 -1.267 1 79.18 0 C14 YD9 503 D 1 
HETATM 3 C C5 YD9 . . . K 3 -21.982 5.422 0.256 1 83.34 0 C5 YD9 503 D 1 
HETATM 4 C C6 YD9 . . . K 3 -23.108 5.295 -0.745 1 84.04 0 C6 YD9 503 D 1 
HETATM 5 C C11 YD9 . . . K 3 -28.94 -0.399 2.707 1 57.57 0 C11 YD9 503 D 1 
HETATM 6 C C7 YD9 . . . K 3 -27.484 1.481 2.547 1 62.42 0 C7 YD9 503 D 1 
HETATM 7 C C8 YD9 . . . K 3 -27.62 1.462 1.162 1 62.7 0 C8 YD9 503 D 1 
HETATM 8 C C9 YD9 . . . K 3 -28.421 0.509 0.584 1 61.31 0 C9 YD9 503 D 1 
HETATM 9 C C10 YD9 . . . K 3 -29.098 -0.439 1.332 1 58.57 0 C10 YD9 503 D 1 
HETATM 10 C C12 YD9 . . . K 3 -28.151 0.539 3.325 1 59.92 0 C12 YD9 503 D 1 
HETATM 11 C C13 YD9 . . . K 3 -23.573 6.681 -1.19 1 89.32 0 C13 YD9 503 D 1 
HETATM 12 N N1 YD9 . . . K 3 -25.476 3.463 1.46 1 70.19 0 N1 YD9 503 D 1 
HETATM 13 N N2 YD9 . . . K 3 -24.731 3.54 3.728 1 73.53 0 N2 YD9 503 D 1 
HETATM 14 C C3 YD9 . . . K 3 -25.603 3.171 2.766 1 70.05 0 C3 YD9 503 D 1 
HETATM 15 N N3 YD9 . . . K 3 -22.304 5.336 1.585 1 83.42 0 N3 YD9 503 D 1 
HETATM 16 C C1 YD9 . . . K 3 -23.442 4.606 2.024 1 77.9 0 C1 YD9 503 D 1 
HETATM 17 C C2 YD9 . . . K 3 -24.397 4.168 1.071 1 75.75 0 C2 YD9 503 D 1 
HETATM 18 N N4 YD9 . . . K 3 -24.266 4.487 -0.274 1 79.09 0 N4 YD9 503 D 1 
HETATM 19 N N5 YD9 . . . K 3 -26.674 2.447 3.191 1 66.67 0 N5 YD9 503 D 1 
HETATM 20 F F1 YD9 . . . K 3 -29.59 -1.318 3.458 1 53.87 0 F1 YD9 503 D 1 
HETATM 21 O O1 YD9 . . . K 3 -29.872 -1.374 0.752 1 56.3 0 O1 YD9 503 D 1 
HETATM 22 F F2 YD9 . . . K 3 -28.551 0.492 -0.763 1 62.6 0 F2 YD9 503 D 1 
HETATM 23 O O2 YD9 . . . K 3 -20.829 5.588 -0.106 1 86.77 0 O2 YD9 503 D 1 
HETATM 24 C C15 YD9 . . . K 3 -25.24 2.711 -1.668 1 80.93 0 C15 YD9 503 D 1 
HETATM 25 C C16 YD9 . . . K 3 -25.34 1.598 -2.061 1 82.18 0 C16 YD9 503 D 1 
HETATM 26 C C17 YD9 . . . K 3 -21.378 5.948 2.553 1 89.91 0 C17 YD9 503 D 1 
HETATM 27 C C18 YD9 . . . K 3 -21.696 7.351 2.93 1 95.36 0 C18 YD9 503 D 1 
HETATM 28 C C19 YD9 . . . K 3 -21.659 8.517 2.274 1 98.51 0 C19 YD9 503 D 1 
HETATM 29 C C20 YD9 . . . K 3 -22.037 9.495 3.133 1 100.34 0 C20 YD9 503 D 1 
HETATM 30 N N6 YD9 . . . K 3 -22.307 8.977 4.331 1 100.52 0 N6 YD9 503 D 1 
HETATM 31 O O3 YD9 . . . K 3 -22.078 7.589 4.202 1 98.33 0 O3 YD9 503 D 1 
#
_model_server_stats.io_time_ms              143 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           240 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#