data_8V4R # _model_server_result.job_id 0lwl4IKtU3cOihiV2TZa_Q _model_server_result.datetime_utc '2024-10-19 17:34:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8v4r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":703}' # _entry.id 8V4R # _exptl.entry_id 8V4R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 8V4R _cell.length_a 139.407 _cell.length_b 139.407 _cell.length_c 542.252 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8V4R _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 8V4R _atom_sites.fract_transf_matrix[1][1] 0.007173 _atom_sites.fract_transf_matrix[1][2] 0.004141 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008283 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.001844 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 AMP A 1 701 701 AMP AMP . E 3 COA A 1 702 702 COA COA . F 4 ACY A 1 703 703 ACY ACY . G 5 GOL A 1 704 704 GOL GOL . H 2 AMP B 1 701 701 AMP AMP . I 3 COA B 1 702 702 COA COA . J 5 GOL B 1 703 704 GOL GOL . K 2 AMP C 1 701 701 AMP AMP . L 3 COA C 1 702 702 COA COA . M 6 HOH A 1 801 37 HOH HOH . M 6 HOH A 2 802 30 HOH HOH . M 6 HOH A 3 803 35 HOH HOH . M 6 HOH A 4 804 13 HOH HOH . M 6 HOH A 5 805 21 HOH HOH . M 6 HOH A 6 806 18 HOH HOH . M 6 HOH A 7 807 12 HOH HOH . M 6 HOH A 8 808 4 HOH HOH . M 6 HOH A 9 809 39 HOH HOH . M 6 HOH A 10 810 24 HOH HOH . M 6 HOH A 11 811 16 HOH HOH . M 6 HOH A 12 812 29 HOH HOH . M 6 HOH A 13 813 25 HOH HOH . M 6 HOH A 14 814 22 HOH HOH . M 6 HOH A 15 815 36 HOH HOH . M 6 HOH A 16 816 11 HOH HOH . M 6 HOH A 17 817 3 HOH HOH . M 6 HOH A 18 818 28 HOH HOH . M 6 HOH A 19 819 19 HOH HOH . M 6 HOH A 20 820 10 HOH HOH . M 6 HOH A 21 821 14 HOH HOH . M 6 HOH A 22 822 5 HOH HOH . M 6 HOH A 23 823 8 HOH HOH . M 6 HOH A 24 824 23 HOH HOH . M 6 HOH A 25 825 27 HOH HOH . M 6 HOH A 26 826 17 HOH HOH . M 6 HOH A 27 827 40 HOH HOH . M 6 HOH A 28 828 33 HOH HOH . N 6 HOH B 1 801 38 HOH HOH . N 6 HOH B 2 802 15 HOH HOH . N 6 HOH B 3 803 7 HOH HOH . N 6 HOH B 4 804 32 HOH HOH . N 6 HOH B 5 805 1 HOH HOH . N 6 HOH B 6 806 31 HOH HOH . N 6 HOH B 7 807 26 HOH HOH . N 6 HOH B 8 808 34 HOH HOH . N 6 HOH B 9 809 41 HOH HOH . N 6 HOH B 10 810 20 HOH HOH . N 6 HOH B 11 811 2 HOH HOH . N 6 HOH B 12 812 9 HOH HOH . O 6 HOH C 1 801 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . F 4 18.746 20.784 -21.111 1 77.04 ? C ACY 703 A 1 HETATM 2 O O ACY . . . F 4 18.579 20.45 -22.312 1 66.55 ? O ACY 703 A 1 HETATM 3 O OXT ACY . . . F 4 19.228 20.101 -20.171 1 72.38 ? OXT ACY 703 A 1 HETATM 4 C CH3 ACY . . . F 4 18.304 22.21 -20.716 1 65.41 ? CH3 ACY 703 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 263 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #