data_8V5F # _model_server_result.job_id YiLoYb6qK-CQkZ4OZKFiYw _model_server_result.datetime_utc '2024-12-27 09:12:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8v5f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":303}' # _entry.id 8V5F # _exptl.entry_id 8V5F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8V5F _cell.length_a 53.241 _cell.length_b 109.226 _cell.length_c 202.385 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8V5F _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 J N N ? 2 K N N ? 2 O N N ? 2 R N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 8V5F _atom_sites.fract_transf_matrix[1][1] 0.018783 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009155 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004941 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 301 6 PO4 PO4 . F 2 PO4 A 1 302 7 PO4 PO4 . G 2 PO4 A 1 303 10 PO4 PO4 . H 3 SO4 A 1 304 5 SO4 SO4 . I 4 CL A 1 305 3 CL CL . J 2 PO4 B 1 301 2 PO4 PO4 . K 2 PO4 B 1 302 9 PO4 PO4 . L 3 SO4 B 1 303 2 SO4 SO4 . M 3 SO4 B 1 304 4 SO4 SO4 . N 4 CL B 1 305 4 CL CL . O 2 PO4 C 1 301 3 PO4 PO4 . P 3 SO4 C 1 302 3 SO4 SO4 . Q 4 CL C 1 303 1 CL CL . R 2 PO4 D 1 301 8 PO4 PO4 . S 3 SO4 D 1 302 1 SO4 SO4 . T 4 CL D 1 303 2 CL CL . U 5 HOH A 1 401 67 HOH HOH . U 5 HOH A 2 402 22 HOH HOH . U 5 HOH A 3 403 68 HOH HOH . U 5 HOH A 4 404 51 HOH HOH . U 5 HOH A 5 405 64 HOH HOH . U 5 HOH A 6 406 85 HOH HOH . U 5 HOH A 7 407 63 HOH HOH . U 5 HOH A 8 408 86 HOH HOH . U 5 HOH A 9 409 61 HOH HOH . V 5 HOH B 1 401 84 HOH HOH . V 5 HOH B 2 402 70 HOH HOH . V 5 HOH B 3 403 78 HOH HOH . V 5 HOH B 4 404 76 HOH HOH . V 5 HOH B 5 405 77 HOH HOH . V 5 HOH B 6 406 71 HOH HOH . V 5 HOH B 7 407 4 HOH HOH . W 5 HOH C 1 401 66 HOH HOH . W 5 HOH C 2 402 55 HOH HOH . W 5 HOH C 3 403 79 HOH HOH . W 5 HOH C 4 404 87 HOH HOH . X 5 HOH D 1 401 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 2 -10.778 -9.178 59.938 1 103.81 ? P PO4 303 A 1 HETATM 2 O O1 PO4 . . . G 2 -9.548 -8.729 59.191 1 100.45 ? O1 PO4 303 A 1 HETATM 3 O O2 PO4 . . . G 2 -12.042 -8.76 59.231 1 73.15 ? O2 PO4 303 A 1 HETATM 4 O O3 PO4 . . . G 2 -10.79 -10.672 59.997 1 79.36 ? O3 PO4 303 A 1 HETATM 5 O O4 PO4 . . . G 2 -10.747 -8.643 61.346 1 95.82 ? O4 PO4 303 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #