data_8V6N # _model_server_result.job_id 8nxtmcvkCl2mHxc_B4tddA _model_server_result.datetime_utc '2024-11-16 19:34:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8v6n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":910}' # _entry.id 8V6N # _exptl.entry_id 8V6N _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8V6N _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 8V6N _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 612 A CYS 612 1_555 A SG CYS 619 A CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 A SG CYS 721 A CYS 721 1_555 A SG CYS 731 A CYS 731 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf3 B SG CYS 612 B CYS 612 1_555 B SG CYS 619 B CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 721 B CYS 721 1_555 B SG CYS 731 B CYS 731 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf5 C SG CYS 612 C CYS 612 1_555 C SG CYS 619 C CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 C SG CYS 721 C CYS 721 1_555 C SG CYS 731 C CYS 731 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf7 D SG CYS 612 D CYS 612 1_555 D SG CYS 619 D CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf8 D SG CYS 721 D CYS 721 1_555 D SG CYS 731 D CYS 731 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 8V6N _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 POV A 1 901 803 POV POV . F 3 ACD A 1 902 804 ACD ACD . G 2 POV A 1 903 805 POV POV . H 2 POV A 1 904 807 POV POV . I 4 FZ4 A 1 905 901 FZ4 LIG . J 4 FZ4 A 1 906 902 FZ4 LIG . K 2 POV A 1 907 802 POV POV . L 2 POV A 1 908 803 POV POV . M 2 POV A 1 909 806 POV POV . N 5 NA A 1 910 1 NA NA . O 2 POV B 1 901 806 POV POV . P 2 POV B 1 902 803 POV POV . Q 3 ACD B 1 903 804 ACD ACD . R 2 POV B 1 904 805 POV POV . S 2 POV B 1 905 807 POV POV . T 4 FZ4 B 1 906 901 FZ4 LIG . U 4 FZ4 B 1 907 902 FZ4 LIG . V 2 POV B 1 908 802 POV POV . W 2 POV C 1 901 806 POV POV . X 2 POV C 1 902 803 POV POV . Y 3 ACD C 1 903 804 ACD ACD . Z 2 POV C 1 904 805 POV POV . AA 2 POV C 1 905 807 POV POV . BA 4 FZ4 C 1 906 901 FZ4 LIG . CA 4 FZ4 C 1 907 902 FZ4 LIG . DA 2 POV C 1 908 802 POV POV . EA 2 POV D 1 901 802 POV POV . FA 2 POV D 1 902 806 POV POV . GA 3 ACD D 1 903 804 ACD ACD . HA 2 POV D 1 904 805 POV POV . IA 2 POV D 1 905 807 POV POV . JA 4 FZ4 D 1 906 901 FZ4 LIG . KA 4 FZ4 D 1 907 902 FZ4 LIG . LA 6 HOH A 1 1001 838 HOH HOH . LA 6 HOH A 2 1002 850 HOH HOH . LA 6 HOH A 3 1003 844 HOH HOH . LA 6 HOH A 4 1004 819 HOH HOH . LA 6 HOH A 5 1005 849 HOH HOH . LA 6 HOH A 6 1006 846 HOH HOH . LA 6 HOH A 7 1007 853 HOH HOH . LA 6 HOH A 8 1008 848 HOH HOH . LA 6 HOH A 9 1009 817 HOH HOH . LA 6 HOH A 10 1010 827 HOH HOH . LA 6 HOH A 11 1011 842 HOH HOH . LA 6 HOH A 12 1012 852 HOH HOH . LA 6 HOH A 13 1013 811 HOH HOH . LA 6 HOH A 14 1014 856 HOH HOH . LA 6 HOH A 15 1015 835 HOH HOH . LA 6 HOH A 16 1016 818 HOH HOH . LA 6 HOH A 17 1017 825 HOH HOH . LA 6 HOH A 18 1018 841 HOH HOH . LA 6 HOH A 19 1019 836 HOH HOH . LA 6 HOH A 20 1020 820 HOH HOH . LA 6 HOH A 21 1021 837 HOH HOH . LA 6 HOH A 22 1022 834 HOH HOH . LA 6 HOH A 23 1023 851 HOH HOH . LA 6 HOH A 24 1024 845 HOH HOH . LA 6 HOH A 25 1025 855 HOH HOH . LA 6 HOH A 26 1026 831 HOH HOH . LA 6 HOH A 27 1027 833 HOH HOH . LA 6 HOH A 28 1028 829 HOH HOH . LA 6 HOH A 29 1029 816 HOH HOH . LA 6 HOH A 30 1030 832 HOH HOH . LA 6 HOH A 31 1031 812 HOH HOH . LA 6 HOH A 32 1032 854 HOH HOH . LA 6 HOH A 33 1033 823 HOH HOH . LA 6 HOH A 34 1034 843 HOH HOH . LA 6 HOH A 35 1035 813 HOH HOH . LA 6 HOH A 36 1036 830 HOH HOH . LA 6 HOH A 37 1037 847 HOH HOH . LA 6 HOH A 38 1038 821 HOH HOH . LA 6 HOH A 39 1039 828 HOH HOH . LA 6 HOH A 40 1040 839 HOH HOH . LA 6 HOH A 41 1041 840 HOH HOH . LA 6 HOH A 42 1042 824 HOH HOH . LA 6 HOH A 43 1043 822 HOH HOH . LA 6 HOH A 44 1044 814 HOH HOH . LA 6 HOH A 45 1045 815 HOH HOH . LA 6 HOH A 46 1046 857 HOH HOH . MA 6 HOH B 1 1001 838 HOH HOH . MA 6 HOH B 2 1002 850 HOH HOH . MA 6 HOH B 3 1003 844 HOH HOH . MA 6 HOH B 4 1004 853 HOH HOH . MA 6 HOH B 5 1005 849 HOH HOH . MA 6 HOH B 6 1006 817 HOH HOH . MA 6 HOH B 7 1007 848 HOH HOH . MA 6 HOH B 8 1008 819 HOH HOH . MA 6 HOH B 9 1009 842 HOH HOH . MA 6 HOH B 10 1010 846 HOH HOH . MA 6 HOH B 11 1011 852 HOH HOH . MA 6 HOH B 12 1012 827 HOH HOH . MA 6 HOH B 13 1013 856 HOH HOH . MA 6 HOH B 14 1014 841 HOH HOH . MA 6 HOH B 15 1015 825 HOH HOH . MA 6 HOH B 16 1016 835 HOH HOH . MA 6 HOH B 17 1017 811 HOH HOH . MA 6 HOH B 18 1018 836 HOH HOH . MA 6 HOH B 19 1019 851 HOH HOH . MA 6 HOH B 20 1020 818 HOH HOH . MA 6 HOH B 21 1021 820 HOH HOH . MA 6 HOH B 22 1022 837 HOH HOH . MA 6 HOH B 23 1023 829 HOH HOH . MA 6 HOH B 24 1024 855 HOH HOH . MA 6 HOH B 25 1025 845 HOH HOH . MA 6 HOH B 26 1026 834 HOH HOH . MA 6 HOH B 27 1027 833 HOH HOH . MA 6 HOH B 28 1028 831 HOH HOH . MA 6 HOH B 29 1029 832 HOH HOH . MA 6 HOH B 30 1030 816 HOH HOH . MA 6 HOH B 31 1031 830 HOH HOH . MA 6 HOH B 32 1032 843 HOH HOH . MA 6 HOH B 33 1033 823 HOH HOH . MA 6 HOH B 34 1034 812 HOH HOH . MA 6 HOH B 35 1035 854 HOH HOH . MA 6 HOH B 36 1036 828 HOH HOH . MA 6 HOH B 37 1037 847 HOH HOH . MA 6 HOH B 38 1038 813 HOH HOH . MA 6 HOH B 39 1039 821 HOH HOH . MA 6 HOH B 40 1040 839 HOH HOH . MA 6 HOH B 41 1041 840 HOH HOH . MA 6 HOH B 42 1042 824 HOH HOH . MA 6 HOH B 43 1043 814 HOH HOH . MA 6 HOH B 44 1044 822 HOH HOH . MA 6 HOH B 45 1045 857 HOH HOH . MA 6 HOH B 46 1046 815 HOH HOH . NA 6 HOH C 1 1001 838 HOH HOH . NA 6 HOH C 2 1002 850 HOH HOH . NA 6 HOH C 3 1003 844 HOH HOH . NA 6 HOH C 4 1004 849 HOH HOH . NA 6 HOH C 5 1005 853 HOH HOH . NA 6 HOH C 6 1006 819 HOH HOH . NA 6 HOH C 7 1007 848 HOH HOH . NA 6 HOH C 8 1008 817 HOH HOH . NA 6 HOH C 9 1009 842 HOH HOH . NA 6 HOH C 10 1010 827 HOH HOH . NA 6 HOH C 11 1011 846 HOH HOH . NA 6 HOH C 12 1012 811 HOH HOH . NA 6 HOH C 13 1013 856 HOH HOH . NA 6 HOH C 14 1014 852 HOH HOH . NA 6 HOH C 15 1015 825 HOH HOH . NA 6 HOH C 16 1016 835 HOH HOH . NA 6 HOH C 17 1017 841 HOH HOH . NA 6 HOH C 18 1018 836 HOH HOH . NA 6 HOH C 19 1019 820 HOH HOH . NA 6 HOH C 20 1020 855 HOH HOH . NA 6 HOH C 21 1021 818 HOH HOH . NA 6 HOH C 22 1022 837 HOH HOH . NA 6 HOH C 23 1023 829 HOH HOH . NA 6 HOH C 24 1024 851 HOH HOH . NA 6 HOH C 25 1025 833 HOH HOH . NA 6 HOH C 26 1026 845 HOH HOH . NA 6 HOH C 27 1027 834 HOH HOH . NA 6 HOH C 28 1028 831 HOH HOH . NA 6 HOH C 29 1029 832 HOH HOH . NA 6 HOH C 30 1030 816 HOH HOH . NA 6 HOH C 31 1031 823 HOH HOH . NA 6 HOH C 32 1032 812 HOH HOH . NA 6 HOH C 33 1033 843 HOH HOH . NA 6 HOH C 34 1034 830 HOH HOH . NA 6 HOH C 35 1035 854 HOH HOH . NA 6 HOH C 36 1036 847 HOH HOH . NA 6 HOH C 37 1037 828 HOH HOH . NA 6 HOH C 38 1038 821 HOH HOH . NA 6 HOH C 39 1039 813 HOH HOH . NA 6 HOH C 40 1040 839 HOH HOH . NA 6 HOH C 41 1041 840 HOH HOH . NA 6 HOH C 42 1042 824 HOH HOH . NA 6 HOH C 43 1043 814 HOH HOH . NA 6 HOH C 44 1044 822 HOH HOH . NA 6 HOH C 45 1045 815 HOH HOH . NA 6 HOH C 46 1046 857 HOH HOH . OA 6 HOH D 1 1001 838 HOH HOH . OA 6 HOH D 2 1002 850 HOH HOH . OA 6 HOH D 3 1003 844 HOH HOH . OA 6 HOH D 4 1004 849 HOH HOH . OA 6 HOH D 5 1005 853 HOH HOH . OA 6 HOH D 6 1006 819 HOH HOH . OA 6 HOH D 7 1007 848 HOH HOH . OA 6 HOH D 8 1008 817 HOH HOH . OA 6 HOH D 9 1009 811 HOH HOH . OA 6 HOH D 10 1010 842 HOH HOH . OA 6 HOH D 11 1011 827 HOH HOH . OA 6 HOH D 12 1012 846 HOH HOH . OA 6 HOH D 13 1013 852 HOH HOH . OA 6 HOH D 14 1014 856 HOH HOH . OA 6 HOH D 15 1015 825 HOH HOH . OA 6 HOH D 16 1016 835 HOH HOH . OA 6 HOH D 17 1017 841 HOH HOH . OA 6 HOH D 18 1018 837 HOH HOH . OA 6 HOH D 19 1019 836 HOH HOH . OA 6 HOH D 20 1020 820 HOH HOH . OA 6 HOH D 21 1021 829 HOH HOH . OA 6 HOH D 22 1022 855 HOH HOH . OA 6 HOH D 23 1023 818 HOH HOH . OA 6 HOH D 24 1024 851 HOH HOH . OA 6 HOH D 25 1025 833 HOH HOH . OA 6 HOH D 26 1026 845 HOH HOH . OA 6 HOH D 27 1027 834 HOH HOH . OA 6 HOH D 28 1028 831 HOH HOH . OA 6 HOH D 29 1029 832 HOH HOH . OA 6 HOH D 30 1030 816 HOH HOH . OA 6 HOH D 31 1031 823 HOH HOH . OA 6 HOH D 32 1032 812 HOH HOH . OA 6 HOH D 33 1033 843 HOH HOH . OA 6 HOH D 34 1034 830 HOH HOH . OA 6 HOH D 35 1035 854 HOH HOH . OA 6 HOH D 36 1036 847 HOH HOH . OA 6 HOH D 37 1037 821 HOH HOH . OA 6 HOH D 38 1038 828 HOH HOH . OA 6 HOH D 39 1039 813 HOH HOH . OA 6 HOH D 40 1040 839 HOH HOH . OA 6 HOH D 41 1041 840 HOH HOH . OA 6 HOH D 42 1042 824 HOH HOH . OA 6 HOH D 43 1043 814 HOH HOH . OA 6 HOH D 44 1044 822 HOH HOH . OA 6 HOH D 45 1045 815 HOH HOH . OA 6 HOH D 46 1046 857 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 5 _atom_site.Cartn_x 102.4 _atom_site.Cartn_y 102.4 _atom_site.Cartn_z 112.89 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 910 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 64 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #