data_8V6O
#
_model_server_result.job_id            l3ItLdbLJCL4G2nwLhR0dA 
_model_server_result.datetime_utc      '2024-11-16 19:56:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8v6o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":912}' 
#
_entry.id    8V6O 
#
_exptl.entry_id    8V6O 
_exptl.method      'ELECTRON MICROSCOPY' 
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_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8V6O 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 8V6O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 P N N 
? 4 Q N N 
? 4 UA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 612 A CYS 612 1_555 A SG CYS 619 A CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf2 B SG CYS 612 B CYS 612 1_555 B SG CYS 619 B CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf3 C SG CYS 612 C CYS 612 1_555 C SG CYS 619 C CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf4 D SG CYS 612 D CYS 612 1_555 D SG CYS 619 D CYS 619 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8V6O 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 POV A 1 901 801 POV POV . 
F 2 POV A 1 902 803 POV POV . 
G 2 POV A 1 903 804 POV POV . 
H 2 POV A 1 904 805 POV POV . 
I 2 POV A 1 905 808 POV POV . 
J 3 FZ4 A 1 906 901 FZ4 LIG . 
K 3 FZ4 A 1 907 902 FZ4 LIG . 
L 2 POV A 1 908 806 POV POV . 
M 2 POV A 1 909 807 POV POV . 
N 2 POV A 1 910 802 POV POV . 
O 2 POV A 1 911 803 POV POV . 
P 4 NA A 1 912 2 NA NA . 
Q 4 NA A 1 913 3 NA NA . 
R 2 POV B 1 901 802 POV POV . 
S 2 POV B 1 902 801 POV POV . 
T 2 POV B 1 903 802 POV POV . 
U 2 POV B 1 904 804 POV POV . 
V 2 POV B 1 905 805 POV POV . 
W 2 POV B 1 906 808 POV POV . 
X 3 FZ4 B 1 907 901 FZ4 LIG . 
Y 3 FZ4 B 1 908 902 FZ4 LIG . 
Z 2 POV B 1 909 806 POV POV . 
AA 2 POV B 1 910 807 POV POV . 
BA 2 POV C 1 901 803 POV POV . 
CA 2 POV C 1 902 801 POV POV . 
DA 2 POV C 1 903 804 POV POV . 
EA 2 POV C 1 904 805 POV POV . 
FA 2 POV C 1 905 808 POV POV . 
GA 3 FZ4 C 1 906 901 FZ4 LIG . 
HA 3 FZ4 C 1 907 902 FZ4 LIG . 
IA 2 POV C 1 908 806 POV POV . 
JA 2 POV C 1 909 807 POV POV . 
KA 2 POV D 1 901 806 POV POV . 
LA 2 POV D 1 902 807 POV POV . 
MA 2 POV D 1 903 802 POV POV . 
NA 2 POV D 1 904 803 POV POV . 
OA 2 POV D 1 905 801 POV POV . 
PA 2 POV D 1 906 804 POV POV . 
QA 2 POV D 1 907 805 POV POV . 
RA 2 POV D 1 908 808 POV POV . 
SA 3 FZ4 D 1 909 901 FZ4 LIG . 
TA 3 FZ4 D 1 910 902 FZ4 LIG . 
UA 4 NA D 1 911 1 NA NA . 
VA 5 HOH A 1 1001 812 HOH HOH . 
VA 5 HOH A 2 1002 815 HOH HOH . 
VA 5 HOH A 3 1003 813 HOH HOH . 
VA 5 HOH A 4 1004 818 HOH HOH . 
VA 5 HOH A 5 1005 822 HOH HOH . 
VA 5 HOH A 6 1006 820 HOH HOH . 
VA 5 HOH A 7 1007 821 HOH HOH . 
VA 5 HOH A 8 1008 814 HOH HOH . 
VA 5 HOH A 9 1009 816 HOH HOH . 
VA 5 HOH A 10 1010 816 HOH HOH . 
VA 5 HOH A 11 1011 817 HOH HOH . 
VA 5 HOH A 12 1012 819 HOH HOH . 
WA 5 HOH B 1 1001 812 HOH HOH . 
WA 5 HOH B 2 1002 815 HOH HOH . 
WA 5 HOH B 3 1003 813 HOH HOH . 
WA 5 HOH B 4 1004 818 HOH HOH . 
WA 5 HOH B 5 1005 820 HOH HOH . 
WA 5 HOH B 6 1006 821 HOH HOH . 
WA 5 HOH B 7 1007 814 HOH HOH . 
WA 5 HOH B 8 1008 816 HOH HOH . 
WA 5 HOH B 9 1009 817 HOH HOH . 
WA 5 HOH B 10 1010 819 HOH HOH . 
XA 5 HOH C 1 1001 812 HOH HOH . 
XA 5 HOH C 2 1002 813 HOH HOH . 
XA 5 HOH C 3 1003 818 HOH HOH . 
XA 5 HOH C 4 1004 822 HOH HOH . 
XA 5 HOH C 5 1005 820 HOH HOH . 
XA 5 HOH C 6 1006 814 HOH HOH . 
XA 5 HOH C 7 1007 821 HOH HOH . 
XA 5 HOH C 8 1008 817 HOH HOH . 
XA 5 HOH C 9 1009 819 HOH HOH . 
YA 5 HOH D 1 1001 812 HOH HOH . 
YA 5 HOH D 2 1002 815 HOH HOH . 
YA 5 HOH D 3 1003 813 HOH HOH . 
YA 5 HOH D 4 1004 815 HOH HOH . 
YA 5 HOH D 5 1005 818 HOH HOH . 
YA 5 HOH D 6 1006 822 HOH HOH . 
YA 5 HOH D 7 1007 822 HOH HOH . 
YA 5 HOH D 8 1008 821 HOH HOH . 
YA 5 HOH D 9 1009 820 HOH HOH . 
YA 5 HOH D 10 1010 816 HOH HOH . 
YA 5 HOH D 11 1011 814 HOH HOH . 
YA 5 HOH D 12 1012 817 HOH HOH . 
YA 5 HOH D 13 1013 819 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         P 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               102.4 
_atom_site.Cartn_y               102.4 
_atom_site.Cartn_z               139.549 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        6.19 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           912 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#