data_8V8J
#
_model_server_result.job_id            otdY0dSJ4ukUt7ethni7hg 
_model_server_result.datetime_utc      '2024-11-27 15:00:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8v8j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1101}' 
#
_entry.id    8V8J 
#
_exptl.entry_id    8V8J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              448.554 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-({(1R)-1-[2-(4,4-dimethylpiperidin-1-yl)-3,6-dimethyl-4-oxo-4H-1-benzopyran-8-yl]ethyl}amino)benzoic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.83 
_cell.angle_gamma         90 
_cell.entry_id            8V8J 
_cell.length_a            236.94 
_cell.length_b            158.48 
_cell.length_c            121.6 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8V8J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    'C 2y' 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G 1 1 
C,D,H,I,J 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 H N N 
#
_chem_comp.formula           'C27 H32 N2 O4' 
_chem_comp.formula_weight    448.554 
_chem_comp.id                YO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-({(1R)-1-[2-(4,4-dimethylpiperidin-1-yl)-3,6-dimethyl-4-oxo-4H-1-benzopyran-8-yl]ethyl}amino)benzoic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 YO4 doub 425 n n 
C1 O2 YO4 sing 426 n n 
C1 C2 YO4 sing 427 n n 
C2 C3 YO4 doub 428 n y 
C2 C27 YO4 sing 429 n y 
C3 N1 YO4 sing 430 n n 
C3 C24 YO4 sing 431 n y 
N1 C4 YO4 sing 432 n n 
C4 C5 YO4 sing 433 n n 
C4 C6 YO4 sing 434 n n 
C6 C7 YO4 doub 435 n y 
C6 C23 YO4 sing 436 n y 
C7 O3 YO4 sing 437 n n 
C7 C19 YO4 sing 438 n y 
O3 C8 YO4 sing 439 n n 
C8 N2 YO4 sing 440 n n 
C8 C16 YO4 doub 441 n n 
N2 C9 YO4 sing 442 n n 
N2 C15 YO4 sing 443 n n 
C9 C10 YO4 sing 444 n n 
C10 C11 YO4 sing 445 n n 
C11 C12 YO4 sing 446 n n 
C11 C13 YO4 sing 447 n n 
C11 C14 YO4 sing 448 n n 
C14 C15 YO4 sing 449 n n 
C16 C17 YO4 sing 450 n n 
C16 C18 YO4 sing 451 n n 
C18 O4 YO4 doub 452 n n 
C18 C19 YO4 sing 453 n n 
C19 C20 YO4 doub 454 n y 
C20 C21 YO4 sing 455 n y 
C21 C22 YO4 sing 456 n n 
C21 C23 YO4 doub 457 n y 
C24 C25 YO4 doub 458 n y 
C25 C26 YO4 sing 459 n y 
C26 C27 YO4 doub 460 n y 
C10 H1 YO4 sing 461 n n 
C10 H2 YO4 sing 462 n n 
C14 H3 YO4 sing 463 n n 
C14 H4 YO4 sing 464 n n 
C20 H5 YO4 sing 465 n n 
C22 H6 YO4 sing 466 n n 
C22 H7 YO4 sing 467 n n 
C22 H8 YO4 sing 468 n n 
C23 H9 YO4 sing 469 n n 
C12 H10 YO4 sing 470 n n 
C12 H11 YO4 sing 471 n n 
C12 H12 YO4 sing 472 n n 
C13 H13 YO4 sing 473 n n 
C13 H14 YO4 sing 474 n n 
C13 H15 YO4 sing 475 n n 
C15 H16 YO4 sing 476 n n 
C15 H17 YO4 sing 477 n n 
C17 H18 YO4 sing 478 n n 
C17 H19 YO4 sing 479 n n 
C17 H20 YO4 sing 480 n n 
C24 H21 YO4 sing 481 n n 
C25 H22 YO4 sing 482 n n 
C26 H23 YO4 sing 483 n n 
C27 H24 YO4 sing 484 n n 
C4 H25 YO4 sing 485 n n 
C5 H26 YO4 sing 486 n n 
C5 H27 YO4 sing 487 n n 
C5 H28 YO4 sing 488 n n 
C9 H29 YO4 sing 489 n n 
C9 H30 YO4 sing 490 n n 
N1 H31 YO4 sing 491 n n 
O2 H32 YO4 sing 492 n n 
#
_atom_sites.entry_id                     8V8J 
_atom_sites.fract_transf_matrix[1][1]    0.00422 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001777 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00631 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008923 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 YO4 A 1 1101 1101 YO4 R07 . 
F 4 YOR A 1 1102 1 YOR LIG . 
G 5 YNZ A 1 1103 1 YNZ LG1 . 
H 3 YO4 C 1 1101 1101 YO4 R07 . 
I 4 YOR C 1 1102 2 YOR LIG . 
J 5 YNZ C 1 1103 2 YNZ LG1 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 YO4 . . . H 3 38.309 18.45 68.1 1 92.67 ? C10 YO4 1101 C 1 
HETATM 2 C C14 YO4 . . . H 3 38.881 19.957 70.019 1 96.93 ? C14 YO4 1101 C 1 
HETATM 3 C C19 YO4 . . . H 3 33.408 18.357 71.34 1 86.53 ? C19 YO4 1101 C 1 
HETATM 4 C C20 YO4 . . . H 3 32.07 18.455 71.681 1 82.61 ? C20 YO4 1101 C 1 
HETATM 5 C C22 YO4 . . . H 3 29.898 19.666 71.672 1 75.77 ? C22 YO4 1101 C 1 
HETATM 6 C C23 YO4 . . . H 3 31.964 20.568 70.581 1 95.03 ? C23 YO4 1101 C 1 
HETATM 7 C C1 YO4 . . . H 3 31.96 25.507 69.711 1 112.25 ? C1 YO4 1101 C 1 
HETATM 8 C C11 YO4 . . . H 3 39.406 19.284 68.76 1 89.51 ? C11 YO4 1101 C 1 
HETATM 9 C C12 YO4 . . . H 3 39.895 20.346 67.785 1 101.15 ? C12 YO4 1101 C 1 
HETATM 10 C C13 YO4 . . . H 3 40.587 18.403 69.159 1 125.67 ? C13 YO4 1101 C 1 
HETATM 11 C C15 YO4 . . . H 3 38.418 18.874 70.984 1 95.94 ? C15 YO4 1101 C 1 
HETATM 12 C C16 YO4 . . . H 3 35.536 17.109 71.38 1 105.35 ? C16 YO4 1101 C 1 
HETATM 13 C C17 YO4 . . . H 3 36.332 15.9 71.795 1 96.77 ? C17 YO4 1101 C 1 
HETATM 14 C C18 YO4 . . . H 3 34.187 17.17 71.745 1 95.08 ? C18 YO4 1101 C 1 
HETATM 15 C C2 YO4 . . . H 3 32.668 24.983 70.888 1 114.86 ? C2 YO4 1101 C 1 
HETATM 16 C C21 YO4 . . . H 3 31.351 19.561 71.301 1 83.57 ? C21 YO4 1101 C 1 
HETATM 17 C C24 YO4 . . . H 3 33.861 23.239 72.031 1 102.55 ? C24 YO4 1101 C 1 
HETATM 18 C C25 YO4 . . . H 3 33.998 24.052 73.134 1 103.45 ? C25 YO4 1101 C 1 
HETATM 19 C C26 YO4 . . . H 3 33.475 25.332 73.124 1 105.77 ? C26 YO4 1101 C 1 
HETATM 20 C C27 YO4 . . . H 3 32.816 25.796 72.013 1 112.86 ? C27 YO4 1101 C 1 
HETATM 21 C C3 YO4 . . . H 3 33.201 23.684 70.889 1 105 ? C3 YO4 1101 C 1 
HETATM 22 C C4 YO4 . . . H 3 33.843 21.679 69.439 1 98.38 ? C4 YO4 1101 C 1 
HETATM 23 C C5 YO4 . . . H 3 33.851 21.286 67.959 1 93.13 ? C5 YO4 1101 C 1 
HETATM 24 C C6 YO4 . . . H 3 33.292 20.499 70.227 1 99.31 ? C6 YO4 1101 C 1 
HETATM 25 C C7 YO4 . . . H 3 34.038 19.374 70.609 1 95.61 ? C7 YO4 1101 C 1 
HETATM 26 C C8 YO4 . . . H 3 36.068 18.144 70.67 1 98.66 ? C8 YO4 1101 C 1 
HETATM 27 C C9 YO4 . . . H 3 37.812 17.405 69.095 1 105.75 ? C9 YO4 1101 C 1 
HETATM 28 N N1 YO4 . . . H 3 33.045 22.881 69.756 1 97.1 ? N1 YO4 1101 C 1 
HETATM 29 N N2 YO4 . . . H 3 37.379 18.132 70.281 1 89.93 ? N2 YO4 1101 C 1 
HETATM 30 O O1 YO4 . . . H 3 30.972 26.203 69.849 1 107.07 ? O1 YO4 1101 C 1 
HETATM 31 O O2 YO4 . . . H 3 32.409 25.22 68.476 1 106.7 ? O2 YO4 1101 C 1 
HETATM 32 O O3 YO4 . . . H 3 35.342 19.209 70.31 1 81.69 ? O3 YO4 1101 C 1 
HETATM 33 O O4 YO4 . . . H 3 33.672 16.266 72.38 1 94.48 ? O4 YO4 1101 C 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           33 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           277 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           33 
#