data_8V8V # _model_server_result.job_id 9WfZ-P4Z67fYf0dss22xxQ _model_server_result.datetime_utc '2024-11-27 02:57:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8v8v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1202}' # _entry.id 8V8V # _exptl.entry_id 8V8V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 441.47 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.04 _cell.angle_gamma 90 _cell.entry_id 8V8V _cell.length_a 84.172 _cell.length_b 121.137 _cell.length_c 163.902 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8V8V _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 H N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id CD2 _struct_conn.ptnr1_label_comp_id LEU _struct_conn.ptnr1_label_seq_id 238 _struct_conn.ptnr1_auth_asym_id C _struct_conn.ptnr1_auth_comp_id LEU _struct_conn.ptnr1_auth_seq_id 233 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id H _struct_conn.ptnr2_label_atom_id C17 _struct_conn.ptnr2_label_comp_id 1LT _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id C _struct_conn.ptnr2_auth_comp_id 1LT _struct_conn.ptnr2_auth_seq_id 1202 _struct_conn.ptnr2_symmetry 2_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.493 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H22 F3 N5 O2 S' _chem_comp.formula_weight 441.47 _chem_comp.id 1LT _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-N~1~-{4-methyl-5-[2-(1,1,1-trifluoro-2-methylpropan-2-yl)pyridin-4-yl]-1,3-thiazol-2-yl}pyrrolidine-1,2-dicarboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Alpelisib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C6 1LT sing 1 n n C5 C4 1LT sing 2 n n C6 C7 1LT sing 3 n n C4 N2 1LT sing 4 n n N3 C8 1LT sing 5 n n N2 C7 1LT sing 6 n n N2 C3 1LT sing 7 n n C7 C8 1LT sing 8 n n C8 O1 1LT doub 9 n n N1 C3 1LT sing 10 n n N1 C2 1LT sing 11 n n C3 O 1LT doub 12 n n N C2 1LT doub 13 n y N C1 1LT sing 14 n y C2 S 1LT sing 15 n y C1 C 1LT sing 16 n n C1 C9 1LT doub 17 n y S C9 1LT sing 18 n y C9 C10 1LT sing 19 n n C10 C11 1LT doub 20 n y C10 C14 1LT sing 21 n y C11 C12 1LT sing 22 n y C14 C13 1LT doub 23 n y C12 N4 1LT doub 24 n y C13 N4 1LT sing 25 n y C13 C15 1LT sing 26 n n C16 C15 1LT sing 27 n n C15 C17 1LT sing 28 n n C15 C18 1LT sing 29 n n F1 C18 1LT sing 30 n n C18 F 1LT sing 31 n n C18 F2 1LT sing 32 n n C11 H1 1LT sing 33 n n C12 H2 1LT sing 34 n n C14 H3 1LT sing 35 n n C16 H4 1LT sing 36 n n C16 H5 1LT sing 37 n n C16 H6 1LT sing 38 n n C17 H7 1LT sing 39 n n C17 H8 1LT sing 40 n n C17 H9 1LT sing 41 n n C H10 1LT sing 42 n n C H11 1LT sing 43 n n C H12 1LT sing 44 n n N1 H13 1LT sing 45 n n C7 H14 1LT sing 46 n n N3 H15 1LT sing 47 n n N3 H16 1LT sing 48 n n C6 H17 1LT sing 49 n n C6 H18 1LT sing 50 n n C5 H19 1LT sing 51 n n C5 H20 1LT sing 52 n n C4 H21 1LT sing 53 n n C4 H22 1LT sing 54 n n # _atom_sites.entry_id 8V8V _atom_sites.fract_transf_matrix[1][1] 0.01188 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000423 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008255 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006105 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 YQ2 A 1 1201 1201 YQ2 21R . F 4 1LT A 1 1202 1101 1LT 1LT . G 3 YQ2 C 1 1201 1201 YQ2 21R . H 4 1LT C 1 1202 1101 1LT 1LT . I 5 HOH A 1 1301 11 HOH HOH . I 5 HOH A 2 1302 104 HOH HOH . I 5 HOH A 3 1303 3 HOH HOH . I 5 HOH A 4 1304 30 HOH HOH . I 5 HOH A 5 1305 21 HOH HOH . I 5 HOH A 6 1306 80 HOH HOH . I 5 HOH A 7 1307 60 HOH HOH . I 5 HOH A 8 1308 32 HOH HOH . I 5 HOH A 9 1309 5 HOH HOH . I 5 HOH A 10 1310 13 HOH HOH . I 5 HOH A 11 1311 8 HOH HOH . I 5 HOH A 12 1312 34 HOH HOH . I 5 HOH A 13 1313 35 HOH HOH . I 5 HOH A 14 1314 26 HOH HOH . I 5 HOH A 15 1315 44 HOH HOH . I 5 HOH A 16 1316 20 HOH HOH . I 5 HOH A 17 1317 53 HOH HOH . I 5 HOH A 18 1318 29 HOH HOH . I 5 HOH A 19 1319 103 HOH HOH . I 5 HOH A 20 1320 25 HOH HOH . I 5 HOH A 21 1321 18 HOH HOH . I 5 HOH A 22 1322 72 HOH HOH . I 5 HOH A 23 1323 121 HOH HOH . I 5 HOH A 24 1324 23 HOH HOH . I 5 HOH A 25 1325 77 HOH HOH . I 5 HOH A 26 1326 94 HOH HOH . I 5 HOH A 27 1327 52 HOH HOH . I 5 HOH A 28 1328 36 HOH HOH . I 5 HOH A 29 1329 65 HOH HOH . I 5 HOH A 30 1330 41 HOH HOH . I 5 HOH A 31 1331 42 HOH HOH . I 5 HOH A 32 1332 93 HOH HOH . I 5 HOH A 33 1333 88 HOH HOH . I 5 HOH A 34 1334 62 HOH HOH . I 5 HOH A 35 1335 106 HOH HOH . I 5 HOH A 36 1336 85 HOH HOH . I 5 HOH A 37 1337 50 HOH HOH . I 5 HOH A 38 1338 54 HOH HOH . I 5 HOH A 39 1339 56 HOH HOH . I 5 HOH A 40 1340 86 HOH HOH . I 5 HOH A 41 1341 67 HOH HOH . I 5 HOH A 42 1342 109 HOH HOH . I 5 HOH A 43 1343 101 HOH HOH . I 5 HOH A 44 1344 110 HOH HOH . I 5 HOH A 45 1345 37 HOH HOH . I 5 HOH A 46 1346 27 HOH HOH . I 5 HOH A 47 1347 48 HOH HOH . I 5 HOH A 48 1348 51 HOH HOH . I 5 HOH A 49 1349 39 HOH HOH . I 5 HOH A 50 1350 31 HOH HOH . I 5 HOH A 51 1351 99 HOH HOH . I 5 HOH A 52 1352 112 HOH HOH . I 5 HOH A 53 1353 105 HOH HOH . I 5 HOH A 54 1354 43 HOH HOH . I 5 HOH A 55 1355 98 HOH HOH . I 5 HOH A 56 1356 46 HOH HOH . I 5 HOH A 57 1357 124 HOH HOH . I 5 HOH A 58 1358 10 HOH HOH . I 5 HOH A 59 1359 45 HOH HOH . I 5 HOH A 60 1360 118 HOH HOH . I 5 HOH A 61 1361 123 HOH HOH . I 5 HOH A 62 1362 73 HOH HOH . I 5 HOH A 63 1363 108 HOH HOH . J 5 HOH B 1 701 68 HOH HOH . J 5 HOH B 2 702 47 HOH HOH . J 5 HOH B 3 703 57 HOH HOH . K 5 HOH C 1 1301 15 HOH HOH . K 5 HOH C 2 1302 91 HOH HOH . K 5 HOH C 3 1303 82 HOH HOH . K 5 HOH C 4 1304 22 HOH HOH . K 5 HOH C 5 1305 75 HOH HOH . K 5 HOH C 6 1306 59 HOH HOH . K 5 HOH C 7 1307 12 HOH HOH . K 5 HOH C 8 1308 66 HOH HOH . K 5 HOH C 9 1309 7 HOH HOH . K 5 HOH C 10 1310 24 HOH HOH . K 5 HOH C 11 1311 4 HOH HOH . K 5 HOH C 12 1312 14 HOH HOH . K 5 HOH C 13 1313 40 HOH HOH . K 5 HOH C 14 1314 78 HOH HOH . K 5 HOH C 15 1315 83 HOH HOH . K 5 HOH C 16 1316 17 HOH HOH . K 5 HOH C 17 1317 63 HOH HOH . K 5 HOH C 18 1318 90 HOH HOH . K 5 HOH C 19 1319 122 HOH HOH . K 5 HOH C 20 1320 71 HOH HOH . K 5 HOH C 21 1321 9 HOH HOH . K 5 HOH C 22 1322 19 HOH HOH . K 5 HOH C 23 1323 116 HOH HOH . K 5 HOH C 24 1324 16 HOH HOH . K 5 HOH C 25 1325 111 HOH HOH . K 5 HOH C 26 1326 74 HOH HOH . K 5 HOH C 27 1327 49 HOH HOH . K 5 HOH C 28 1328 102 HOH HOH . K 5 HOH C 29 1329 38 HOH HOH . K 5 HOH C 30 1330 58 HOH HOH . K 5 HOH C 31 1331 114 HOH HOH . K 5 HOH C 32 1332 117 HOH HOH . K 5 HOH C 33 1333 119 HOH HOH . K 5 HOH C 34 1334 113 HOH HOH . K 5 HOH C 35 1335 61 HOH HOH . K 5 HOH C 36 1336 81 HOH HOH . K 5 HOH C 37 1337 107 HOH HOH . K 5 HOH C 38 1338 64 HOH HOH . L 5 HOH D 1 701 84 HOH HOH . L 5 HOH D 2 702 100 HOH HOH . L 5 HOH D 3 703 92 HOH HOH . L 5 HOH D 4 704 79 HOH HOH . L 5 HOH D 5 705 87 HOH HOH . L 5 HOH D 6 706 120 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 1LT . . . H 4 4.48 -7.287 0.51 1 46.52 ? C1 1LT 1202 C 1 HETATM 2 C C2 1LT . . . H 4 2.339 -7.434 0.899 1 39.55 ? C2 1LT 1202 C 1 HETATM 3 C C3 1LT . . . H 4 -0.019 -7.798 1.638 1 41.09 ? C3 1LT 1202 C 1 HETATM 4 O O1 1LT . . . H 4 -3.95 -9.613 1.764 1 79.28 ? O1 1LT 1202 C 1 HETATM 5 C C11 1LT . . . H 4 6.738 -9.595 0.364 1 63.51 ? C11 1LT 1202 C 1 HETATM 6 C C12 1LT . . . H 4 7.656 -10.62 0.548 1 70.8 ? C12 1LT 1202 C 1 HETATM 7 C C13 1LT . . . H 4 6.172 -11.786 1.89 1 75.46 ? C13 1LT 1202 C 1 HETATM 8 C C14 1LT . . . H 4 5.227 -10.774 1.745 1 63.82 ? C14 1LT 1202 C 1 HETATM 9 C C15 1LT . . . H 4 5.863 -13.04 2.731 1 67.71 ? C15 1LT 1202 C 1 HETATM 10 C C16 1LT . . . H 4 6.339 -14.3 1.952 1 79.34 ? C16 1LT 1202 C 1 HETATM 11 C C17 1LT . . . H 4 4.33 -13.234 2.925 1 66.67 ? C17 1LT 1202 C 1 HETATM 12 C C18 1LT . . . H 4 6.565 -12.941 4.125 1 66.83 ? C18 1LT 1202 C 1 HETATM 13 F F2 1LT . . . H 4 5.736 -12.375 5.032 1 109.11 ? F2 1LT 1202 C 1 HETATM 14 F F 1LT . . . H 4 7.684 -12.194 4.05 1 60.3 ? F 1LT 1202 C 1 HETATM 15 F F1 1LT . . . H 4 6.933 -14.167 4.535 1 88.36 ? F1 1LT 1202 C 1 HETATM 16 N N4 1LT . . . H 4 7.364 -11.687 1.285 1 78.54 ? N4 1LT 1202 C 1 HETATM 17 C C10 1LT . . . H 4 5.492 -9.627 1.002 1 51.08 ? C10 1LT 1202 C 1 HETATM 18 C C9 1LT . . . H 4 4.446 -8.617 0.859 1 52.88 ? C9 1LT 1202 C 1 HETATM 19 C C 1LT . . . H 4 5.694 -6.521 0.049 1 52.66 ? C 1LT 1202 C 1 HETATM 20 S S 1LT . . . H 4 2.831 -9.026 1.282 1 99.8 ? S 1LT 1202 C 1 HETATM 21 N N 1LT . . . H 4 3.289 -6.637 0.512 1 48.5 ? N 1LT 1202 C 1 HETATM 22 N N1 1LT . . . H 4 0.993 -7.106 1.04 1 35.29 ? N1 1LT 1202 C 1 HETATM 23 O O 1LT . . . H 4 0.05 -8.894 2.181 1 45.03 ? O 1LT 1202 C 1 HETATM 24 N N2 1LT . . . H 4 -1.204 -7.133 1.572 1 44.15 ? N2 1LT 1202 C 1 HETATM 25 C C7 1LT . . . H 4 -2.445 -7.709 2.142 1 47.32 ? C7 1LT 1202 C 1 HETATM 26 C C8 1LT . . . H 4 -2.929 -9.007 1.453 1 64.37 ? C8 1LT 1202 C 1 HETATM 27 N N3 1LT . . . H 4 -2.198 -9.502 0.468 1 69.64 ? N3 1LT 1202 C 1 HETATM 28 C C6 1LT . . . H 4 -3.47 -6.56 2.039 1 52.02 ? C6 1LT 1202 C 1 HETATM 29 C C5 1LT . . . H 4 -2.749 -5.391 1.351 1 53.27 ? C5 1LT 1202 C 1 HETATM 30 C C4 1LT . . . H 4 -1.354 -5.837 0.926 1 49.48 ? C4 1LT 1202 C 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #