data_8V8W
#
_model_server_result.job_id            sMpOuNx9BdutONKTwshfNw 
_model_server_result.datetime_utc      '2024-12-26 13:04:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8v8w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    8V8W 
#
_exptl.entry_id    8V8W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            8V8W 
_cell.length_a            67.801 
_cell.length_b            67.801 
_cell.length_c            200.023 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8V8W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             209 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              208 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             228 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              227 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        A 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        A 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.04 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 243 n n 
C1 H11 MPD sing 244 n n 
C1 H12 MPD sing 245 n n 
C1 H13 MPD sing 246 n n 
C2 O2 MPD sing 247 n n 
C2 CM MPD sing 248 n n 
C2 C3 MPD sing 249 n n 
O2 HO2 MPD sing 250 n n 
CM HM1 MPD sing 251 n n 
CM HM2 MPD sing 252 n n 
CM HM3 MPD sing 253 n n 
C3 C4 MPD sing 254 n n 
C3 H31 MPD sing 255 n n 
C3 H32 MPD sing 256 n n 
C4 O4 MPD sing 257 n n 
C4 C5 MPD sing 258 n n 
C4 H4 MPD sing 259 n n 
O4 HO4 MPD sing 260 n n 
C5 H51 MPD sing 261 n n 
C5 H52 MPD sing 262 n n 
C5 H53 MPD sing 263 n n 
#
_atom_sites.entry_id                     8V8W 
_atom_sites.fract_transf_matrix[1][1]    0.014749 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014749 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004999 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ACT A 1 501 501 ACT ACT . 
C 3 SO4 A 1 502 1 SO4 SO4 . 
D 4 MPD A 1 503 501 MPD MPD . 
E 5 OXM A 1 504 501 OXM OXM . 
F 5 OXM A 1 505 502 OXM OXM . 
G 6 HOH A 1 601 105 HOH HOH . 
G 6 HOH A 2 602 229 HOH HOH . 
G 6 HOH A 3 603 119 HOH HOH . 
G 6 HOH A 4 604 180 HOH HOH . 
G 6 HOH A 5 605 206 HOH HOH . 
G 6 HOH A 6 606 169 HOH HOH . 
G 6 HOH A 7 607 205 HOH HOH . 
G 6 HOH A 8 608 163 HOH HOH . 
G 6 HOH A 9 609 226 HOH HOH . 
G 6 HOH A 10 610 170 HOH HOH . 
G 6 HOH A 11 611 217 HOH HOH . 
G 6 HOH A 12 612 211 HOH HOH . 
G 6 HOH A 13 613 155 HOH HOH . 
G 6 HOH A 14 614 157 HOH HOH . 
G 6 HOH A 15 615 201 HOH HOH . 
G 6 HOH A 16 616 171 HOH HOH . 
G 6 HOH A 17 617 110 HOH HOH . 
G 6 HOH A 18 618 44 HOH HOH . 
G 6 HOH A 19 619 184 HOH HOH . 
G 6 HOH A 20 620 209 HOH HOH . 
G 6 HOH A 21 621 80 HOH HOH . 
G 6 HOH A 22 622 149 HOH HOH . 
G 6 HOH A 23 623 122 HOH HOH . 
G 6 HOH A 24 624 17 HOH HOH . 
G 6 HOH A 25 625 60 HOH HOH . 
G 6 HOH A 26 626 15 HOH HOH . 
G 6 HOH A 27 627 190 HOH HOH . 
G 6 HOH A 28 628 56 HOH HOH . 
G 6 HOH A 29 629 123 HOH HOH . 
G 6 HOH A 30 630 37 HOH HOH . 
G 6 HOH A 31 631 115 HOH HOH . 
G 6 HOH A 32 632 73 HOH HOH . 
G 6 HOH A 33 633 109 HOH HOH . 
G 6 HOH A 34 634 193 HOH HOH . 
G 6 HOH A 35 635 42 HOH HOH . 
G 6 HOH A 36 636 90 HOH HOH . 
G 6 HOH A 37 637 126 HOH HOH . 
G 6 HOH A 38 638 83 HOH HOH . 
G 6 HOH A 39 639 78 HOH HOH . 
G 6 HOH A 40 640 227 HOH HOH . 
G 6 HOH A 41 641 120 HOH HOH . 
G 6 HOH A 42 642 43 HOH HOH . 
G 6 HOH A 43 643 100 HOH HOH . 
G 6 HOH A 44 644 52 HOH HOH . 
G 6 HOH A 45 645 54 HOH HOH . 
G 6 HOH A 46 646 66 HOH HOH . 
G 6 HOH A 47 647 29 HOH HOH . 
G 6 HOH A 48 648 25 HOH HOH . 
G 6 HOH A 49 649 31 HOH HOH . 
G 6 HOH A 50 650 33 HOH HOH . 
G 6 HOH A 51 651 153 HOH HOH . 
G 6 HOH A 52 652 152 HOH HOH . 
G 6 HOH A 53 653 76 HOH HOH . 
G 6 HOH A 54 654 70 HOH HOH . 
G 6 HOH A 55 655 10 HOH HOH . 
G 6 HOH A 56 656 49 HOH HOH . 
G 6 HOH A 57 657 132 HOH HOH . 
G 6 HOH A 58 658 137 HOH HOH . 
G 6 HOH A 59 659 19 HOH HOH . 
G 6 HOH A 60 660 164 HOH HOH . 
G 6 HOH A 61 661 225 HOH HOH . 
G 6 HOH A 62 662 128 HOH HOH . 
G 6 HOH A 63 663 144 HOH HOH . 
G 6 HOH A 64 664 143 HOH HOH . 
G 6 HOH A 65 665 103 HOH HOH . 
G 6 HOH A 66 666 27 HOH HOH . 
G 6 HOH A 67 667 13 HOH HOH . 
G 6 HOH A 68 668 12 HOH HOH . 
G 6 HOH A 69 669 142 HOH HOH . 
G 6 HOH A 70 670 88 HOH HOH . 
G 6 HOH A 71 671 216 HOH HOH . 
G 6 HOH A 72 672 3 HOH HOH . 
G 6 HOH A 73 673 179 HOH HOH . 
G 6 HOH A 74 674 30 HOH HOH . 
G 6 HOH A 75 675 114 HOH HOH . 
G 6 HOH A 76 676 139 HOH HOH . 
G 6 HOH A 77 677 117 HOH HOH . 
G 6 HOH A 78 678 89 HOH HOH . 
G 6 HOH A 79 679 72 HOH HOH . 
G 6 HOH A 80 680 198 HOH HOH . 
G 6 HOH A 81 681 50 HOH HOH . 
G 6 HOH A 82 682 8 HOH HOH . 
G 6 HOH A 83 683 23 HOH HOH . 
G 6 HOH A 84 684 71 HOH HOH . 
G 6 HOH A 85 685 86 HOH HOH . 
G 6 HOH A 86 686 46 HOH HOH . 
G 6 HOH A 87 687 108 HOH HOH . 
G 6 HOH A 88 688 20 HOH HOH . 
G 6 HOH A 89 689 85 HOH HOH . 
G 6 HOH A 90 690 145 HOH HOH . 
G 6 HOH A 91 691 185 HOH HOH . 
G 6 HOH A 92 692 188 HOH HOH . 
G 6 HOH A 93 693 195 HOH HOH . 
G 6 HOH A 94 694 48 HOH HOH . 
G 6 HOH A 95 695 4 HOH HOH . 
G 6 HOH A 96 696 159 HOH HOH . 
G 6 HOH A 97 697 127 HOH HOH . 
G 6 HOH A 98 698 125 HOH HOH . 
G 6 HOH A 99 699 57 HOH HOH . 
G 6 HOH A 100 700 189 HOH HOH . 
G 6 HOH A 101 701 133 HOH HOH . 
G 6 HOH A 102 702 47 HOH HOH . 
G 6 HOH A 103 703 146 HOH HOH . 
G 6 HOH A 104 704 165 HOH HOH . 
G 6 HOH A 105 705 22 HOH HOH . 
G 6 HOH A 106 706 160 HOH HOH . 
G 6 HOH A 107 707 16 HOH HOH . 
G 6 HOH A 108 708 81 HOH HOH . 
G 6 HOH A 109 709 87 HOH HOH . 
G 6 HOH A 110 710 58 HOH HOH . 
G 6 HOH A 111 711 101 HOH HOH . 
G 6 HOH A 112 712 1 HOH HOH . 
G 6 HOH A 113 713 131 HOH HOH . 
G 6 HOH A 114 714 218 HOH HOH . 
G 6 HOH A 115 715 36 HOH HOH . 
G 6 HOH A 116 716 166 HOH HOH . 
G 6 HOH A 117 717 24 HOH HOH . 
G 6 HOH A 118 718 154 HOH HOH . 
G 6 HOH A 119 719 84 HOH HOH . 
G 6 HOH A 120 720 21 HOH HOH . 
G 6 HOH A 121 721 18 HOH HOH . 
G 6 HOH A 122 722 196 HOH HOH . 
G 6 HOH A 123 723 136 HOH HOH . 
G 6 HOH A 124 724 53 HOH HOH . 
G 6 HOH A 125 725 158 HOH HOH . 
G 6 HOH A 126 726 51 HOH HOH . 
G 6 HOH A 127 727 63 HOH HOH . 
G 6 HOH A 128 728 138 HOH HOH . 
G 6 HOH A 129 729 202 HOH HOH . 
G 6 HOH A 130 730 75 HOH HOH . 
G 6 HOH A 131 731 7 HOH HOH . 
G 6 HOH A 132 732 34 HOH HOH . 
G 6 HOH A 133 733 111 HOH HOH . 
G 6 HOH A 134 734 168 HOH HOH . 
G 6 HOH A 135 735 26 HOH HOH . 
G 6 HOH A 136 736 191 HOH HOH . 
G 6 HOH A 137 737 199 HOH HOH . 
G 6 HOH A 138 738 140 HOH HOH . 
G 6 HOH A 139 739 97 HOH HOH . 
G 6 HOH A 140 740 61 HOH HOH . 
G 6 HOH A 141 741 130 HOH HOH . 
G 6 HOH A 142 742 38 HOH HOH . 
G 6 HOH A 143 743 172 HOH HOH . 
G 6 HOH A 144 744 65 HOH HOH . 
G 6 HOH A 145 745 112 HOH HOH . 
G 6 HOH A 146 746 113 HOH HOH . 
G 6 HOH A 147 747 79 HOH HOH . 
G 6 HOH A 148 748 14 HOH HOH . 
G 6 HOH A 149 749 135 HOH HOH . 
G 6 HOH A 150 750 28 HOH HOH . 
G 6 HOH A 151 751 40 HOH HOH . 
G 6 HOH A 152 752 77 HOH HOH . 
G 6 HOH A 153 753 74 HOH HOH . 
G 6 HOH A 154 754 68 HOH HOH . 
G 6 HOH A 155 755 102 HOH HOH . 
G 6 HOH A 156 756 121 HOH HOH . 
G 6 HOH A 157 757 124 HOH HOH . 
G 6 HOH A 158 758 69 HOH HOH . 
G 6 HOH A 159 759 175 HOH HOH . 
G 6 HOH A 160 760 94 HOH HOH . 
G 6 HOH A 161 761 5 HOH HOH . 
G 6 HOH A 162 762 194 HOH HOH . 
G 6 HOH A 163 763 141 HOH HOH . 
G 6 HOH A 164 764 91 HOH HOH . 
G 6 HOH A 165 765 150 HOH HOH . 
G 6 HOH A 166 766 99 HOH HOH . 
G 6 HOH A 167 767 59 HOH HOH . 
G 6 HOH A 168 768 11 HOH HOH . 
G 6 HOH A 169 769 95 HOH HOH . 
G 6 HOH A 170 770 182 HOH HOH . 
G 6 HOH A 171 771 219 HOH HOH . 
G 6 HOH A 172 772 148 HOH HOH . 
G 6 HOH A 173 773 96 HOH HOH . 
G 6 HOH A 174 774 2 HOH HOH . 
G 6 HOH A 175 775 106 HOH HOH . 
G 6 HOH A 176 776 64 HOH HOH . 
G 6 HOH A 177 777 210 HOH HOH . 
G 6 HOH A 178 778 35 HOH HOH . 
G 6 HOH A 179 779 161 HOH HOH . 
G 6 HOH A 180 780 197 HOH HOH . 
G 6 HOH A 181 781 107 HOH HOH . 
G 6 HOH A 182 782 104 HOH HOH . 
G 6 HOH A 183 783 223 HOH HOH . 
G 6 HOH A 184 784 67 HOH HOH . 
G 6 HOH A 185 785 222 HOH HOH . 
G 6 HOH A 186 786 118 HOH HOH . 
G 6 HOH A 187 787 228 HOH HOH . 
G 6 HOH A 188 788 45 HOH HOH . 
G 6 HOH A 189 789 39 HOH HOH . 
G 6 HOH A 190 790 92 HOH HOH . 
G 6 HOH A 191 791 147 HOH HOH . 
G 6 HOH A 192 792 183 HOH HOH . 
G 6 HOH A 193 793 62 HOH HOH . 
G 6 HOH A 194 794 134 HOH HOH . 
G 6 HOH A 195 795 208 HOH HOH . 
G 6 HOH A 196 796 9 HOH HOH . 
G 6 HOH A 197 797 41 HOH HOH . 
G 6 HOH A 198 798 6 HOH HOH . 
G 6 HOH A 199 799 200 HOH HOH . 
G 6 HOH A 200 800 151 HOH HOH . 
G 6 HOH A 201 801 173 HOH HOH . 
G 6 HOH A 202 802 213 HOH HOH . 
G 6 HOH A 203 803 204 HOH HOH . 
G 6 HOH A 204 804 221 HOH HOH . 
G 6 HOH A 205 805 178 HOH HOH . 
G 6 HOH A 206 806 156 HOH HOH . 
G 6 HOH A 207 807 176 HOH HOH . 
G 6 HOH A 208 808 181 HOH HOH . 
G 6 HOH A 209 809 203 HOH HOH . 
G 6 HOH A 210 810 174 HOH HOH . 
G 6 HOH A 211 811 192 HOH HOH . 
G 6 HOH A 212 812 167 HOH HOH . 
G 6 HOH A 213 813 187 HOH HOH . 
G 6 HOH A 214 814 82 HOH HOH . 
G 6 HOH A 215 815 224 HOH HOH . 
G 6 HOH A 216 816 55 HOH HOH . 
G 6 HOH A 217 817 212 HOH HOH . 
G 6 HOH A 218 818 186 HOH HOH . 
G 6 HOH A 219 819 162 HOH HOH . 
G 6 HOH A 220 820 177 HOH HOH . 
G 6 HOH A 221 821 32 HOH HOH . 
G 6 HOH A 222 822 129 HOH HOH . 
G 6 HOH A 223 823 116 HOH HOH . 
G 6 HOH A 224 824 215 HOH HOH . 
G 6 HOH A 225 825 207 HOH HOH . 
G 6 HOH A 226 826 220 HOH HOH . 
G 6 HOH A 227 827 98 HOH HOH . 
G 6 HOH A 228 828 214 HOH HOH . 
G 6 HOH A 229 829 93 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . D 4 0.668 4.434 7.629 1 42.48 ? C1 MPD 503 A 1 
HETATM 2 C C2 MPD . . . D 4 -0.635 5.187 7.864 1 34.33 ? C2 MPD 503 A 1 
HETATM 3 O O2 MPD . . . D 4 -0.484 6.404 7.121 1 31.17 ? O2 MPD 503 A 1 
HETATM 4 C CM MPD . . . D 4 -0.781 5.478 9.346 1 32.84 ? CM MPD 503 A 1 
HETATM 5 C C3 MPD . . . D 4 -1.81 4.324 7.379 1 35.91 ? C3 MPD 503 A 1 
HETATM 6 C C4 MPD . . . D 4 -3.206 4.806 7.716 1 35.34 ? C4 MPD 503 A 1 
HETATM 7 O O4 MPD . . . D 4 -3.334 6.117 7.133 1 38.58 ? O4 MPD 503 A 1 
HETATM 8 C C5 MPD . . . D 4 -4.261 3.871 7.153 1 41.42 ? C5 MPD 503 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           322 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#