data_8V8W # _model_server_result.job_id BjC6RRPJpPLbvhdA2j5zaA _model_server_result.datetime_utc '2024-12-26 13:36:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8v8w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 8V8W # _exptl.entry_id 8V8W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 89.05 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXAMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8V8W _cell.length_a 67.801 _cell.length_b 67.801 _cell.length_c 200.023 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8V8W _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 209 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 208 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 228 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 227 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id A _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id A _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.04 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H3 N O3' _chem_comp.formula_weight 89.05 _chem_comp.id OXM _chem_comp.mon_nstd_flag . _chem_comp.name 'OXAMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 OXM sing 264 n n C1 O1 OXM doub 265 n n C1 C2 OXM sing 266 n n N1 HN1 OXM sing 267 n n N1 HN2 OXM sing 268 n n C2 O2 OXM doub 269 n n C2 O3 OXM sing 270 n n O3 HO3 OXM sing 271 n n # _atom_sites.entry_id 8V8W _atom_sites.fract_transf_matrix[1][1] 0.014749 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014749 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004999 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT A 1 501 501 ACT ACT . C 3 SO4 A 1 502 1 SO4 SO4 . D 4 MPD A 1 503 501 MPD MPD . E 5 OXM A 1 504 501 OXM OXM . F 5 OXM A 1 505 502 OXM OXM . G 6 HOH A 1 601 105 HOH HOH . G 6 HOH A 2 602 229 HOH HOH . G 6 HOH A 3 603 119 HOH HOH . G 6 HOH A 4 604 180 HOH HOH . G 6 HOH A 5 605 206 HOH HOH . G 6 HOH A 6 606 169 HOH HOH . G 6 HOH A 7 607 205 HOH HOH . G 6 HOH A 8 608 163 HOH HOH . G 6 HOH A 9 609 226 HOH HOH . G 6 HOH A 10 610 170 HOH HOH . G 6 HOH A 11 611 217 HOH HOH . G 6 HOH A 12 612 211 HOH HOH . G 6 HOH A 13 613 155 HOH HOH . G 6 HOH A 14 614 157 HOH HOH . G 6 HOH A 15 615 201 HOH HOH . G 6 HOH A 16 616 171 HOH HOH . G 6 HOH A 17 617 110 HOH HOH . G 6 HOH A 18 618 44 HOH HOH . G 6 HOH A 19 619 184 HOH HOH . G 6 HOH A 20 620 209 HOH HOH . G 6 HOH A 21 621 80 HOH HOH . G 6 HOH A 22 622 149 HOH HOH . G 6 HOH A 23 623 122 HOH HOH . G 6 HOH A 24 624 17 HOH HOH . G 6 HOH A 25 625 60 HOH HOH . G 6 HOH A 26 626 15 HOH HOH . G 6 HOH A 27 627 190 HOH HOH . G 6 HOH A 28 628 56 HOH HOH . G 6 HOH A 29 629 123 HOH HOH . G 6 HOH A 30 630 37 HOH HOH . G 6 HOH A 31 631 115 HOH HOH . G 6 HOH A 32 632 73 HOH HOH . G 6 HOH A 33 633 109 HOH HOH . G 6 HOH A 34 634 193 HOH HOH . G 6 HOH A 35 635 42 HOH HOH . G 6 HOH A 36 636 90 HOH HOH . G 6 HOH A 37 637 126 HOH HOH . G 6 HOH A 38 638 83 HOH HOH . G 6 HOH A 39 639 78 HOH HOH . G 6 HOH A 40 640 227 HOH HOH . G 6 HOH A 41 641 120 HOH HOH . G 6 HOH A 42 642 43 HOH HOH . G 6 HOH A 43 643 100 HOH HOH . G 6 HOH A 44 644 52 HOH HOH . G 6 HOH A 45 645 54 HOH HOH . G 6 HOH A 46 646 66 HOH HOH . G 6 HOH A 47 647 29 HOH HOH . G 6 HOH A 48 648 25 HOH HOH . G 6 HOH A 49 649 31 HOH HOH . G 6 HOH A 50 650 33 HOH HOH . G 6 HOH A 51 651 153 HOH HOH . G 6 HOH A 52 652 152 HOH HOH . G 6 HOH A 53 653 76 HOH HOH . G 6 HOH A 54 654 70 HOH HOH . G 6 HOH A 55 655 10 HOH HOH . G 6 HOH A 56 656 49 HOH HOH . G 6 HOH A 57 657 132 HOH HOH . G 6 HOH A 58 658 137 HOH HOH . G 6 HOH A 59 659 19 HOH HOH . G 6 HOH A 60 660 164 HOH HOH . G 6 HOH A 61 661 225 HOH HOH . G 6 HOH A 62 662 128 HOH HOH . G 6 HOH A 63 663 144 HOH HOH . G 6 HOH A 64 664 143 HOH HOH . G 6 HOH A 65 665 103 HOH HOH . G 6 HOH A 66 666 27 HOH HOH . G 6 HOH A 67 667 13 HOH HOH . G 6 HOH A 68 668 12 HOH HOH . G 6 HOH A 69 669 142 HOH HOH . G 6 HOH A 70 670 88 HOH HOH . G 6 HOH A 71 671 216 HOH HOH . G 6 HOH A 72 672 3 HOH HOH . G 6 HOH A 73 673 179 HOH HOH . G 6 HOH A 74 674 30 HOH HOH . G 6 HOH A 75 675 114 HOH HOH . G 6 HOH A 76 676 139 HOH HOH . G 6 HOH A 77 677 117 HOH HOH . G 6 HOH A 78 678 89 HOH HOH . G 6 HOH A 79 679 72 HOH HOH . G 6 HOH A 80 680 198 HOH HOH . G 6 HOH A 81 681 50 HOH HOH . G 6 HOH A 82 682 8 HOH HOH . G 6 HOH A 83 683 23 HOH HOH . G 6 HOH A 84 684 71 HOH HOH . G 6 HOH A 85 685 86 HOH HOH . G 6 HOH A 86 686 46 HOH HOH . G 6 HOH A 87 687 108 HOH HOH . G 6 HOH A 88 688 20 HOH HOH . G 6 HOH A 89 689 85 HOH HOH . G 6 HOH A 90 690 145 HOH HOH . G 6 HOH A 91 691 185 HOH HOH . G 6 HOH A 92 692 188 HOH HOH . G 6 HOH A 93 693 195 HOH HOH . G 6 HOH A 94 694 48 HOH HOH . G 6 HOH A 95 695 4 HOH HOH . G 6 HOH A 96 696 159 HOH HOH . G 6 HOH A 97 697 127 HOH HOH . G 6 HOH A 98 698 125 HOH HOH . G 6 HOH A 99 699 57 HOH HOH . G 6 HOH A 100 700 189 HOH HOH . G 6 HOH A 101 701 133 HOH HOH . G 6 HOH A 102 702 47 HOH HOH . G 6 HOH A 103 703 146 HOH HOH . G 6 HOH A 104 704 165 HOH HOH . G 6 HOH A 105 705 22 HOH HOH . G 6 HOH A 106 706 160 HOH HOH . G 6 HOH A 107 707 16 HOH HOH . G 6 HOH A 108 708 81 HOH HOH . G 6 HOH A 109 709 87 HOH HOH . G 6 HOH A 110 710 58 HOH HOH . G 6 HOH A 111 711 101 HOH HOH . G 6 HOH A 112 712 1 HOH HOH . G 6 HOH A 113 713 131 HOH HOH . G 6 HOH A 114 714 218 HOH HOH . G 6 HOH A 115 715 36 HOH HOH . G 6 HOH A 116 716 166 HOH HOH . G 6 HOH A 117 717 24 HOH HOH . G 6 HOH A 118 718 154 HOH HOH . G 6 HOH A 119 719 84 HOH HOH . G 6 HOH A 120 720 21 HOH HOH . G 6 HOH A 121 721 18 HOH HOH . G 6 HOH A 122 722 196 HOH HOH . G 6 HOH A 123 723 136 HOH HOH . G 6 HOH A 124 724 53 HOH HOH . G 6 HOH A 125 725 158 HOH HOH . G 6 HOH A 126 726 51 HOH HOH . G 6 HOH A 127 727 63 HOH HOH . G 6 HOH A 128 728 138 HOH HOH . G 6 HOH A 129 729 202 HOH HOH . G 6 HOH A 130 730 75 HOH HOH . G 6 HOH A 131 731 7 HOH HOH . G 6 HOH A 132 732 34 HOH HOH . G 6 HOH A 133 733 111 HOH HOH . G 6 HOH A 134 734 168 HOH HOH . G 6 HOH A 135 735 26 HOH HOH . G 6 HOH A 136 736 191 HOH HOH . G 6 HOH A 137 737 199 HOH HOH . G 6 HOH A 138 738 140 HOH HOH . G 6 HOH A 139 739 97 HOH HOH . G 6 HOH A 140 740 61 HOH HOH . G 6 HOH A 141 741 130 HOH HOH . G 6 HOH A 142 742 38 HOH HOH . G 6 HOH A 143 743 172 HOH HOH . G 6 HOH A 144 744 65 HOH HOH . G 6 HOH A 145 745 112 HOH HOH . G 6 HOH A 146 746 113 HOH HOH . G 6 HOH A 147 747 79 HOH HOH . G 6 HOH A 148 748 14 HOH HOH . G 6 HOH A 149 749 135 HOH HOH . G 6 HOH A 150 750 28 HOH HOH . G 6 HOH A 151 751 40 HOH HOH . G 6 HOH A 152 752 77 HOH HOH . G 6 HOH A 153 753 74 HOH HOH . G 6 HOH A 154 754 68 HOH HOH . G 6 HOH A 155 755 102 HOH HOH . G 6 HOH A 156 756 121 HOH HOH . G 6 HOH A 157 757 124 HOH HOH . G 6 HOH A 158 758 69 HOH HOH . G 6 HOH A 159 759 175 HOH HOH . G 6 HOH A 160 760 94 HOH HOH . G 6 HOH A 161 761 5 HOH HOH . G 6 HOH A 162 762 194 HOH HOH . G 6 HOH A 163 763 141 HOH HOH . G 6 HOH A 164 764 91 HOH HOH . G 6 HOH A 165 765 150 HOH HOH . G 6 HOH A 166 766 99 HOH HOH . G 6 HOH A 167 767 59 HOH HOH . G 6 HOH A 168 768 11 HOH HOH . G 6 HOH A 169 769 95 HOH HOH . G 6 HOH A 170 770 182 HOH HOH . G 6 HOH A 171 771 219 HOH HOH . G 6 HOH A 172 772 148 HOH HOH . G 6 HOH A 173 773 96 HOH HOH . G 6 HOH A 174 774 2 HOH HOH . G 6 HOH A 175 775 106 HOH HOH . G 6 HOH A 176 776 64 HOH HOH . G 6 HOH A 177 777 210 HOH HOH . G 6 HOH A 178 778 35 HOH HOH . G 6 HOH A 179 779 161 HOH HOH . G 6 HOH A 180 780 197 HOH HOH . G 6 HOH A 181 781 107 HOH HOH . G 6 HOH A 182 782 104 HOH HOH . G 6 HOH A 183 783 223 HOH HOH . G 6 HOH A 184 784 67 HOH HOH . G 6 HOH A 185 785 222 HOH HOH . G 6 HOH A 186 786 118 HOH HOH . G 6 HOH A 187 787 228 HOH HOH . G 6 HOH A 188 788 45 HOH HOH . G 6 HOH A 189 789 39 HOH HOH . G 6 HOH A 190 790 92 HOH HOH . G 6 HOH A 191 791 147 HOH HOH . G 6 HOH A 192 792 183 HOH HOH . G 6 HOH A 193 793 62 HOH HOH . G 6 HOH A 194 794 134 HOH HOH . G 6 HOH A 195 795 208 HOH HOH . G 6 HOH A 196 796 9 HOH HOH . G 6 HOH A 197 797 41 HOH HOH . G 6 HOH A 198 798 6 HOH HOH . G 6 HOH A 199 799 200 HOH HOH . G 6 HOH A 200 800 151 HOH HOH . G 6 HOH A 201 801 173 HOH HOH . G 6 HOH A 202 802 213 HOH HOH . G 6 HOH A 203 803 204 HOH HOH . G 6 HOH A 204 804 221 HOH HOH . G 6 HOH A 205 805 178 HOH HOH . G 6 HOH A 206 806 156 HOH HOH . G 6 HOH A 207 807 176 HOH HOH . G 6 HOH A 208 808 181 HOH HOH . G 6 HOH A 209 809 203 HOH HOH . G 6 HOH A 210 810 174 HOH HOH . G 6 HOH A 211 811 192 HOH HOH . G 6 HOH A 212 812 167 HOH HOH . G 6 HOH A 213 813 187 HOH HOH . G 6 HOH A 214 814 82 HOH HOH . G 6 HOH A 215 815 224 HOH HOH . G 6 HOH A 216 816 55 HOH HOH . G 6 HOH A 217 817 212 HOH HOH . G 6 HOH A 218 818 186 HOH HOH . G 6 HOH A 219 819 162 HOH HOH . G 6 HOH A 220 820 177 HOH HOH . G 6 HOH A 221 821 32 HOH HOH . G 6 HOH A 222 822 129 HOH HOH . G 6 HOH A 223 823 116 HOH HOH . G 6 HOH A 224 824 215 HOH HOH . G 6 HOH A 225 825 207 HOH HOH . G 6 HOH A 226 826 220 HOH HOH . G 6 HOH A 227 827 98 HOH HOH . G 6 HOH A 228 828 214 HOH HOH . G 6 HOH A 229 829 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OXM . . . F 5 10.47 -11.391 32.673 1 54.52 ? C1 OXM 505 A 1 HETATM 2 N N1 OXM . . . F 5 9.432 -12.228 32.825 1 64.21 ? N1 OXM 505 A 1 HETATM 3 O O1 OXM . . . F 5 10.348 -10.175 32.674 1 60.95 ? O1 OXM 505 A 1 HETATM 4 C C2 OXM . . . F 5 11.843 -12.108 32.434 1 44.47 ? C2 OXM 505 A 1 HETATM 5 O O2 OXM . . . F 5 12.211 -11.973 31.274 1 46.83 ? O2 OXM 505 A 1 HETATM 6 O O3 OXM . . . F 5 12.399 -12.732 33.376 1 40.02 ? O3 OXM 505 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #