data_8VBO # _model_server_result.job_id -owKRK2Jnzzyfg9zGR5APw _model_server_result.datetime_utc '2024-11-24 17:07:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vbo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":304}' # _entry.id 8VBO # _exptl.entry_id 8VBO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VBO _cell.length_a 70.107 _cell.length_b 150.891 _cell.length_c 51.318 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VBO _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 L CYS 23 1_555 A SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 138 L CYS 134 1_555 A SG CYS 197 L CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 215 L CYS 211 1_555 B SG CYS 265 H CYS 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 B SG CYS 22 H CYS 22 1_555 B SG CYS 95 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 106 H CYS 103 1_555 B SG CYS 126 H CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf6 B SG CYS 116 H CYS 113 1_555 B SG CYS 130 H CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf7 B SG CYS 189 H CYS 186 1_555 B SG CYS 245 H CYS 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 284 n n S O2 SO4 doub 285 n n S O3 SO4 sing 286 n n S O4 SO4 sing 287 n n # _atom_sites.entry_id 8VBO _atom_sites.fract_transf_matrix[1][1] 0.014264 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006627 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019486 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL H 1 301 302 GOL GOL . D 3 GOL H 1 302 303 GOL GOL . E 4 SO4 H 1 303 1 SO4 SO4 . F 4 SO4 H 1 304 2 SO4 SO4 . G 4 SO4 H 1 305 3 SO4 SO4 . H 5 HOH L 1 301 32 HOH HOH . H 5 HOH L 2 302 25 HOH HOH . H 5 HOH L 3 303 4 HOH HOH . H 5 HOH L 4 304 2 HOH HOH . H 5 HOH L 5 305 5 HOH HOH . H 5 HOH L 6 306 21 HOH HOH . H 5 HOH L 7 307 8 HOH HOH . H 5 HOH L 8 308 39 HOH HOH . H 5 HOH L 9 309 28 HOH HOH . H 5 HOH L 10 310 30 HOH HOH . H 5 HOH L 11 311 12 HOH HOH . H 5 HOH L 12 312 15 HOH HOH . H 5 HOH L 13 313 6 HOH HOH . H 5 HOH L 14 314 17 HOH HOH . H 5 HOH L 15 315 13 HOH HOH . H 5 HOH L 16 316 1 HOH HOH . H 5 HOH L 17 317 7 HOH HOH . H 5 HOH L 18 318 3 HOH HOH . H 5 HOH L 19 319 19 HOH HOH . H 5 HOH L 20 320 24 HOH HOH . H 5 HOH L 21 321 18 HOH HOH . H 5 HOH L 22 322 22 HOH HOH . H 5 HOH L 23 323 47 HOH HOH . I 5 HOH H 1 401 31 HOH HOH . I 5 HOH H 2 402 35 HOH HOH . I 5 HOH H 3 403 38 HOH HOH . I 5 HOH H 4 404 41 HOH HOH . I 5 HOH H 5 405 51 HOH HOH . I 5 HOH H 6 406 36 HOH HOH . I 5 HOH H 7 407 9 HOH HOH . I 5 HOH H 8 408 29 HOH HOH . I 5 HOH H 9 409 14 HOH HOH . I 5 HOH H 10 410 23 HOH HOH . I 5 HOH H 11 411 10 HOH HOH . I 5 HOH H 12 412 11 HOH HOH . I 5 HOH H 13 413 16 HOH HOH . I 5 HOH H 14 414 27 HOH HOH . I 5 HOH H 15 415 20 HOH HOH . I 5 HOH H 16 416 26 HOH HOH . I 5 HOH H 17 417 49 HOH HOH . I 5 HOH H 18 418 43 HOH HOH . I 5 HOH H 19 419 40 HOH HOH . I 5 HOH H 20 420 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . F 4 2.076 38.845 -20.769 1 98.52 ? S SO4 304 H 1 HETATM 2 O O1 SO4 . . . F 4 2.926 38.173 -21.749 1 92.93 ? O1 SO4 304 H 1 HETATM 3 O O2 SO4 . . . F 4 0.678 38.716 -21.17 1 92.58 ? O2 SO4 304 H 1 HETATM 4 O O3 SO4 . . . F 4 2.264 38.234 -19.457 1 84.24 ? O3 SO4 304 H 1 HETATM 5 O O4 SO4 . . . F 4 2.436 40.259 -20.701 1 91.89 ? O4 SO4 304 H 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 5 #