data_8VGA
#
_model_server_result.job_id            6Qzzy2BKsMyJroikL-peKg 
_model_server_result.datetime_utc      '2024-11-06 08:48:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          8vga 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":401}' 
#
_entry.id    8VGA 
#
_exptl.entry_id    8VGA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          115.23 
_cell.angle_gamma         90 
_cell.entry_id            8VGA 
_cell.length_a            109.055 
_cell.length_b            61.468 
_cell.length_c            111.871 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 8VGA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 51 A SER 51 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? 
metalc ? metalc2 A OG1 THR 191 A THR 191 1_555 C MG MG . A MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc3 C MG MG . A MG 401 1_555 D O3G GSP . A GSP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc4 C MG MG . A MG 401 1_555 D O2B GSP . A GSP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc5 C MG MG . A MG 401 1_555 G O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
metalc ? metalc6 C MG MG . A MG 401 1_555 G O HOH . A HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? 
metalc ? metalc7 B OG SER 51 B SER 51 1_555 E MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc8 B OG1 THR 191 B THR 191 1_555 E MG MG . B MG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc9 E MG MG . B MG 401 1_555 F O3G GSP . B GSP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
metalc ? metalc10 E MG MG . B MG 401 1_555 F O2B GSP . B GSP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc11 E MG MG . B MG 401 1_555 H O HOH . B HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
metalc ? metalc12 E MG MG . B MG 401 1_555 H O HOH . B HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     8VGA 
_atom_sites.fract_transf_matrix[1][1]    0.00917 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004321 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016269 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009882 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 401 1381 MG MG . 
D 3 GSP A 1 402 1382 GSP GSP . 
E 2 MG B 1 401 1381 MG MG . 
F 3 GSP B 1 402 1382 GSP GSP . 
G 4 HOH A 1 501 41 HOH HOH . 
G 4 HOH A 2 502 120 HOH HOH . 
G 4 HOH A 3 503 11 HOH HOH . 
G 4 HOH A 4 504 94 HOH HOH . 
G 4 HOH A 5 505 2 HOH HOH . 
G 4 HOH A 6 506 39 HOH HOH . 
G 4 HOH A 7 507 61 HOH HOH . 
G 4 HOH A 8 508 133 HOH HOH . 
G 4 HOH A 9 509 85 HOH HOH . 
G 4 HOH A 10 510 66 HOH HOH . 
G 4 HOH A 11 511 67 HOH HOH . 
G 4 HOH A 12 512 89 HOH HOH . 
G 4 HOH A 13 513 129 HOH HOH . 
G 4 HOH A 14 514 24 HOH HOH . 
G 4 HOH A 15 515 76 HOH HOH . 
G 4 HOH A 16 516 6 HOH HOH . 
G 4 HOH A 17 517 149 HOH HOH . 
G 4 HOH A 18 518 68 HOH HOH . 
G 4 HOH A 19 519 119 HOH HOH . 
G 4 HOH A 20 520 146 HOH HOH . 
G 4 HOH A 21 521 122 HOH HOH . 
G 4 HOH A 22 522 88 HOH HOH . 
G 4 HOH A 23 523 91 HOH HOH . 
G 4 HOH A 24 524 12 HOH HOH . 
G 4 HOH A 25 525 14 HOH HOH . 
G 4 HOH A 26 526 92 HOH HOH . 
G 4 HOH A 27 527 15 HOH HOH . 
G 4 HOH A 28 528 13 HOH HOH . 
G 4 HOH A 29 529 48 HOH HOH . 
G 4 HOH A 30 530 63 HOH HOH . 
G 4 HOH A 31 531 59 HOH HOH . 
G 4 HOH A 32 532 51 HOH HOH . 
G 4 HOH A 33 533 57 HOH HOH . 
G 4 HOH A 34 534 5 HOH HOH . 
G 4 HOH A 35 535 10 HOH HOH . 
G 4 HOH A 36 536 127 HOH HOH . 
G 4 HOH A 37 537 81 HOH HOH . 
G 4 HOH A 38 538 47 HOH HOH . 
G 4 HOH A 39 539 97 HOH HOH . 
G 4 HOH A 40 540 145 HOH HOH . 
G 4 HOH A 41 541 100 HOH HOH . 
G 4 HOH A 42 542 95 HOH HOH . 
G 4 HOH A 43 543 104 HOH HOH . 
G 4 HOH A 44 544 26 HOH HOH . 
G 4 HOH A 45 545 148 HOH HOH . 
G 4 HOH A 46 546 28 HOH HOH . 
G 4 HOH A 47 547 139 HOH HOH . 
G 4 HOH A 48 548 112 HOH HOH . 
G 4 HOH A 49 549 90 HOH HOH . 
G 4 HOH A 50 550 36 HOH HOH . 
G 4 HOH A 51 551 56 HOH HOH . 
G 4 HOH A 52 552 64 HOH HOH . 
G 4 HOH A 53 553 82 HOH HOH . 
G 4 HOH A 54 554 110 HOH HOH . 
G 4 HOH A 55 555 144 HOH HOH . 
G 4 HOH A 56 556 135 HOH HOH . 
G 4 HOH A 57 557 70 HOH HOH . 
G 4 HOH A 58 558 27 HOH HOH . 
G 4 HOH A 59 559 69 HOH HOH . 
G 4 HOH A 60 560 125 HOH HOH . 
G 4 HOH A 61 561 108 HOH HOH . 
G 4 HOH A 62 562 35 HOH HOH . 
G 4 HOH A 63 563 136 HOH HOH . 
G 4 HOH A 64 564 86 HOH HOH . 
G 4 HOH A 65 565 140 HOH HOH . 
G 4 HOH A 66 566 102 HOH HOH . 
G 4 HOH A 67 567 29 HOH HOH . 
G 4 HOH A 68 568 130 HOH HOH . 
G 4 HOH A 69 569 126 HOH HOH . 
G 4 HOH A 70 570 134 HOH HOH . 
G 4 HOH A 71 571 131 HOH HOH . 
G 4 HOH A 72 572 105 HOH HOH . 
G 4 HOH A 73 573 80 HOH HOH . 
G 4 HOH A 74 574 99 HOH HOH . 
G 4 HOH A 75 575 79 HOH HOH . 
G 4 HOH A 76 576 115 HOH HOH . 
G 4 HOH A 77 577 138 HOH HOH . 
G 4 HOH A 78 578 137 HOH HOH . 
H 4 HOH B 1 501 141 HOH HOH . 
H 4 HOH B 2 502 143 HOH HOH . 
H 4 HOH B 3 503 18 HOH HOH . 
H 4 HOH B 4 504 8 HOH HOH . 
H 4 HOH B 5 505 20 HOH HOH . 
H 4 HOH B 6 506 43 HOH HOH . 
H 4 HOH B 7 507 53 HOH HOH . 
H 4 HOH B 8 508 71 HOH HOH . 
H 4 HOH B 9 509 117 HOH HOH . 
H 4 HOH B 10 510 114 HOH HOH . 
H 4 HOH B 11 511 107 HOH HOH . 
H 4 HOH B 12 512 55 HOH HOH . 
H 4 HOH B 13 513 3 HOH HOH . 
H 4 HOH B 14 514 34 HOH HOH . 
H 4 HOH B 15 515 113 HOH HOH . 
H 4 HOH B 16 516 33 HOH HOH . 
H 4 HOH B 17 517 87 HOH HOH . 
H 4 HOH B 18 518 38 HOH HOH . 
H 4 HOH B 19 519 49 HOH HOH . 
H 4 HOH B 20 520 22 HOH HOH . 
H 4 HOH B 21 521 75 HOH HOH . 
H 4 HOH B 22 522 58 HOH HOH . 
H 4 HOH B 23 523 1 HOH HOH . 
H 4 HOH B 24 524 73 HOH HOH . 
H 4 HOH B 25 525 60 HOH HOH . 
H 4 HOH B 26 526 109 HOH HOH . 
H 4 HOH B 27 527 7 HOH HOH . 
H 4 HOH B 28 528 83 HOH HOH . 
H 4 HOH B 29 529 54 HOH HOH . 
H 4 HOH B 30 530 93 HOH HOH . 
H 4 HOH B 31 531 4 HOH HOH . 
H 4 HOH B 32 532 30 HOH HOH . 
H 4 HOH B 33 533 31 HOH HOH . 
H 4 HOH B 34 534 116 HOH HOH . 
H 4 HOH B 35 535 101 HOH HOH . 
H 4 HOH B 36 536 121 HOH HOH . 
H 4 HOH B 37 537 40 HOH HOH . 
H 4 HOH B 38 538 21 HOH HOH . 
H 4 HOH B 39 539 72 HOH HOH . 
H 4 HOH B 40 540 147 HOH HOH . 
H 4 HOH B 41 541 23 HOH HOH . 
H 4 HOH B 42 542 16 HOH HOH . 
H 4 HOH B 43 543 45 HOH HOH . 
H 4 HOH B 44 544 32 HOH HOH . 
H 4 HOH B 45 545 25 HOH HOH . 
H 4 HOH B 46 546 50 HOH HOH . 
H 4 HOH B 47 547 98 HOH HOH . 
H 4 HOH B 48 548 19 HOH HOH . 
H 4 HOH B 49 549 37 HOH HOH . 
H 4 HOH B 50 550 17 HOH HOH . 
H 4 HOH B 51 551 44 HOH HOH . 
H 4 HOH B 52 552 9 HOH HOH . 
H 4 HOH B 53 553 96 HOH HOH . 
H 4 HOH B 54 554 62 HOH HOH . 
H 4 HOH B 55 555 42 HOH HOH . 
H 4 HOH B 56 556 77 HOH HOH . 
H 4 HOH B 57 557 103 HOH HOH . 
H 4 HOH B 58 558 78 HOH HOH . 
H 4 HOH B 59 559 123 HOH HOH . 
H 4 HOH B 60 560 124 HOH HOH . 
H 4 HOH B 61 561 74 HOH HOH . 
H 4 HOH B 62 562 128 HOH HOH . 
H 4 HOH B 63 563 46 HOH HOH . 
H 4 HOH B 64 564 106 HOH HOH . 
H 4 HOH B 65 565 111 HOH HOH . 
H 4 HOH B 66 566 65 HOH HOH . 
H 4 HOH B 67 567 84 HOH HOH . 
H 4 HOH B 68 568 142 HOH HOH . 
H 4 HOH B 69 569 118 HOH HOH . 
H 4 HOH B 70 570 132 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               162.459 
_atom_site.Cartn_y               7.595 
_atom_site.Cartn_z               144.837 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        32.86 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           32 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#