data_8VNX # _model_server_result.job_id uzNIOtG3W4EiwNpcteEGEA _model_server_result.datetime_utc '2025-01-18 10:47:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 8vnx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 8VNX # _exptl.entry_id 8VNX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 444.91 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4P)-4-[5-(2-chloro-6-fluoroanilino)-6-(methoxymethyl)-1H-indazol-1-yl]-N-methylthiophene-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 8VNX _cell.length_a 52.22 _cell.length_b 71.21 _cell.length_c 107.74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 8VNX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H18 Cl F N4 O2 S' _chem_comp.formula_weight 444.91 _chem_comp.id WHQ _chem_comp.mon_nstd_flag . _chem_comp.name (4P)-4-[5-(2-chloro-6-fluoroanilino)-6-(methoxymethyl)-1H-indazol-1-yl]-N-methylthiophene-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C19 N4 WHQ sing 376 n n N4 C18 WHQ sing 377 n n C18 O01 WHQ doub 378 n n C18 C16 WHQ sing 379 n n C15 C16 WHQ doub 380 n y C15 C1 WHQ sing 381 n y C16 S1 WHQ sing 382 n y N2 C4 WHQ doub 383 n y N2 N1 WHQ sing 384 n y C4 C3 WHQ sing 385 n y C1 N1 WHQ sing 386 n n C1 C17 WHQ doub 387 n y N1 C2 WHQ sing 388 n y S1 C17 WHQ sing 389 n y C3 C2 WHQ doub 390 n y C3 C8 WHQ sing 391 n y C2 C5 WHQ sing 392 n y C8 C7 WHQ doub 393 n y C5 C6 WHQ doub 394 n y F1 C14 WHQ sing 395 n n C7 C6 WHQ sing 396 n y C7 N3 WHQ sing 397 n n C13 C14 WHQ doub 398 n y C13 C12 WHQ sing 399 n y C6 C20 WHQ sing 400 n n C14 C9 WHQ sing 401 n y C12 C11 WHQ doub 402 n y C9 N3 WHQ sing 403 n n C9 C10 WHQ doub 404 n y C11 C10 WHQ sing 405 n y C10 CL1 WHQ sing 406 n n C20 O1 WHQ sing 407 n n O1 C21 WHQ sing 408 n n C13 H7 WHQ sing 409 n n C15 H8 WHQ sing 410 n n C17 H9 WHQ sing 411 n n C21 H21 WHQ sing 412 n n C21 H17 WHQ sing 413 n n C21 H16 WHQ sing 414 n n C11 H5 WHQ sing 415 n n C12 H6 WHQ sing 416 n n C19 H12 WHQ sing 417 n n C19 H13 WHQ sing 418 n n C19 H11 WHQ sing 419 n n C20 H15 WHQ sing 420 n n C20 H14 WHQ sing 421 n n C4 H1 WHQ sing 422 n n C5 H2 WHQ sing 423 n n C8 H3 WHQ sing 424 n n N3 H4 WHQ sing 425 n n N4 H10 WHQ sing 426 n n # _atom_sites.entry_id 8VNX _atom_sites.fract_transf_matrix[1][1] 0.01915 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014043 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009282 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 WHQ A 1 501 501 WHQ 21J . C 3 HOH A 1 601 4 HOH HOH . C 3 HOH A 2 602 56 HOH HOH . C 3 HOH A 3 603 80 HOH HOH . C 3 HOH A 4 604 29 HOH HOH . C 3 HOH A 5 605 87 HOH HOH . C 3 HOH A 6 606 22 HOH HOH . C 3 HOH A 7 607 132 HOH HOH . C 3 HOH A 8 608 20 HOH HOH . C 3 HOH A 9 609 59 HOH HOH . C 3 HOH A 10 610 109 HOH HOH . C 3 HOH A 11 611 53 HOH HOH . C 3 HOH A 12 612 63 HOH HOH . C 3 HOH A 13 613 139 HOH HOH . C 3 HOH A 14 614 117 HOH HOH . C 3 HOH A 15 615 8 HOH HOH . C 3 HOH A 16 616 25 HOH HOH . C 3 HOH A 17 617 130 HOH HOH . C 3 HOH A 18 618 15 HOH HOH . C 3 HOH A 19 619 101 HOH HOH . C 3 HOH A 20 620 21 HOH HOH . C 3 HOH A 21 621 9 HOH HOH . C 3 HOH A 22 622 86 HOH HOH . C 3 HOH A 23 623 125 HOH HOH . C 3 HOH A 24 624 98 HOH HOH . C 3 HOH A 25 625 46 HOH HOH . C 3 HOH A 26 626 69 HOH HOH . C 3 HOH A 27 627 55 HOH HOH . C 3 HOH A 28 628 47 HOH HOH . C 3 HOH A 29 629 5 HOH HOH . C 3 HOH A 30 630 1 HOH HOH . C 3 HOH A 31 631 90 HOH HOH . C 3 HOH A 32 632 41 HOH HOH . C 3 HOH A 33 633 99 HOH HOH . C 3 HOH A 34 634 28 HOH HOH . C 3 HOH A 35 635 68 HOH HOH . C 3 HOH A 36 636 7 HOH HOH . C 3 HOH A 37 637 39 HOH HOH . C 3 HOH A 38 638 19 HOH HOH . C 3 HOH A 39 639 10 HOH HOH . C 3 HOH A 40 640 26 HOH HOH . C 3 HOH A 41 641 60 HOH HOH . C 3 HOH A 42 642 49 HOH HOH . C 3 HOH A 43 643 23 HOH HOH . C 3 HOH A 44 644 57 HOH HOH . C 3 HOH A 45 645 77 HOH HOH . C 3 HOH A 46 646 88 HOH HOH . C 3 HOH A 47 647 30 HOH HOH . C 3 HOH A 48 648 135 HOH HOH . C 3 HOH A 49 649 12 HOH HOH . C 3 HOH A 50 650 54 HOH HOH . C 3 HOH A 51 651 38 HOH HOH . C 3 HOH A 52 652 40 HOH HOH . C 3 HOH A 53 653 52 HOH HOH . C 3 HOH A 54 654 83 HOH HOH . C 3 HOH A 55 655 89 HOH HOH . C 3 HOH A 56 656 14 HOH HOH . C 3 HOH A 57 657 75 HOH HOH . C 3 HOH A 58 658 70 HOH HOH . C 3 HOH A 59 659 16 HOH HOH . C 3 HOH A 60 660 122 HOH HOH . C 3 HOH A 61 661 3 HOH HOH . C 3 HOH A 62 662 95 HOH HOH . C 3 HOH A 63 663 66 HOH HOH . C 3 HOH A 64 664 91 HOH HOH . C 3 HOH A 65 665 140 HOH HOH . C 3 HOH A 66 666 6 HOH HOH . C 3 HOH A 67 667 51 HOH HOH . C 3 HOH A 68 668 136 HOH HOH . C 3 HOH A 69 669 17 HOH HOH . C 3 HOH A 70 670 42 HOH HOH . C 3 HOH A 71 671 31 HOH HOH . C 3 HOH A 72 672 115 HOH HOH . C 3 HOH A 73 673 131 HOH HOH . C 3 HOH A 74 674 137 HOH HOH . C 3 HOH A 75 675 67 HOH HOH . C 3 HOH A 76 676 18 HOH HOH . C 3 HOH A 77 677 121 HOH HOH . C 3 HOH A 78 678 102 HOH HOH . C 3 HOH A 79 679 124 HOH HOH . C 3 HOH A 80 680 61 HOH HOH . C 3 HOH A 81 681 58 HOH HOH . C 3 HOH A 82 682 128 HOH HOH . C 3 HOH A 83 683 65 HOH HOH . C 3 HOH A 84 684 35 HOH HOH . C 3 HOH A 85 685 64 HOH HOH . C 3 HOH A 86 686 48 HOH HOH . C 3 HOH A 87 687 119 HOH HOH . C 3 HOH A 88 688 33 HOH HOH . C 3 HOH A 89 689 73 HOH HOH . C 3 HOH A 90 690 50 HOH HOH . C 3 HOH A 91 691 96 HOH HOH . C 3 HOH A 92 692 71 HOH HOH . C 3 HOH A 93 693 94 HOH HOH . C 3 HOH A 94 694 37 HOH HOH . C 3 HOH A 95 695 43 HOH HOH . C 3 HOH A 96 696 36 HOH HOH . C 3 HOH A 97 697 2 HOH HOH . C 3 HOH A 98 698 62 HOH HOH . C 3 HOH A 99 699 123 HOH HOH . C 3 HOH A 100 700 34 HOH HOH . C 3 HOH A 101 701 11 HOH HOH . C 3 HOH A 102 702 134 HOH HOH . C 3 HOH A 103 703 108 HOH HOH . C 3 HOH A 104 704 74 HOH HOH . C 3 HOH A 105 705 120 HOH HOH . C 3 HOH A 106 706 113 HOH HOH . C 3 HOH A 107 707 27 HOH HOH . C 3 HOH A 108 708 126 HOH HOH . C 3 HOH A 109 709 85 HOH HOH . C 3 HOH A 110 710 13 HOH HOH . C 3 HOH A 111 711 78 HOH HOH . C 3 HOH A 112 712 97 HOH HOH . C 3 HOH A 113 713 105 HOH HOH . C 3 HOH A 114 714 45 HOH HOH . C 3 HOH A 115 715 82 HOH HOH . C 3 HOH A 116 716 84 HOH HOH . C 3 HOH A 117 717 114 HOH HOH . C 3 HOH A 118 718 72 HOH HOH . C 3 HOH A 119 719 32 HOH HOH . C 3 HOH A 120 720 81 HOH HOH . C 3 HOH A 121 721 93 HOH HOH . C 3 HOH A 122 722 24 HOH HOH . C 3 HOH A 123 723 133 HOH HOH . C 3 HOH A 124 724 110 HOH HOH . C 3 HOH A 125 725 116 HOH HOH . C 3 HOH A 126 726 79 HOH HOH . C 3 HOH A 127 727 107 HOH HOH . C 3 HOH A 128 728 127 HOH HOH . C 3 HOH A 129 729 44 HOH HOH . C 3 HOH A 130 730 103 HOH HOH . C 3 HOH A 131 731 92 HOH HOH . C 3 HOH A 132 732 104 HOH HOH . C 3 HOH A 133 733 112 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 WHQ . . . B 2 18.575 11.696 36.674 1 26.42 ? C13 WHQ 501 A 1 HETATM 2 C C15 WHQ . . . B 2 22.841 4.575 31.99 1 24.68 ? C15 WHQ 501 A 1 HETATM 3 C C17 WHQ . . . B 2 23.222 6.293 30.356 1 25.17 ? C17 WHQ 501 A 1 HETATM 4 C C21 WHQ . . . B 2 23.849 12.561 30.012 1 39.08 ? C21 WHQ 501 A 1 HETATM 5 O O01 WHQ . . . B 2 25.742 2.481 31.284 1 38.17 ? O01 WHQ 501 A 1 HETATM 6 C C11 WHQ . . . B 2 17.427 13.279 35.193 1 22.78 ? C11 WHQ 501 A 1 HETATM 7 C C12 WHQ . . . B 2 17.571 12.529 36.505 1 25 ? C12 WHQ 501 A 1 HETATM 8 C C16 WHQ . . . B 2 23.974 4.031 31.288 1 23.95 ? C16 WHQ 501 A 1 HETATM 9 C C19 WHQ . . . B 2 24.515 0.451 32.725 1 45.25 ? C19 WHQ 501 A 1 HETATM 10 CL CL1 WHQ . . . B 2 18.162 13.96 32.705 1 34.21 ? CL1 WHQ 501 A 1 HETATM 11 C C1 WHQ . . . B 2 22.424 5.861 31.432 1 24.67 ? C1 WHQ 501 A 1 HETATM 12 C C10 WHQ . . . B 2 18.311 13.09 34.237 1 28.13 ? C10 WHQ 501 A 1 HETATM 13 C C14 WHQ . . . B 2 19.597 11.485 35.565 1 27.38 ? C14 WHQ 501 A 1 HETATM 14 C C18 WHQ . . . B 2 24.632 2.703 31.631 1 28.59 ? C18 WHQ 501 A 1 HETATM 15 C C2 WHQ . . . B 2 21.422 8.017 32.218 1 28.04 ? C2 WHQ 501 A 1 HETATM 16 C C20 WHQ . . . B 2 23.045 11.402 31.924 1 29.44 ? C20 WHQ 501 A 1 HETATM 17 C C3 WHQ . . . B 2 20.182 8.283 32.853 1 24.14 ? C3 WHQ 501 A 1 HETATM 18 C C4 WHQ . . . B 2 19.543 7.011 32.973 1 25.85 ? C4 WHQ 501 A 1 HETATM 19 C C5 WHQ . . . B 2 22.313 9.012 31.937 1 25.68 ? C5 WHQ 501 A 1 HETATM 20 C C6 WHQ . . . B 2 22.02 10.326 32.274 1 28.9 ? C6 WHQ 501 A 1 HETATM 21 C C7 WHQ . . . B 2 20.783 10.616 32.904 1 28.42 ? C7 WHQ 501 A 1 HETATM 22 C C8 WHQ . . . B 2 19.877 9.58 33.184 1 25.26 ? C8 WHQ 501 A 1 HETATM 23 C C9 WHQ . . . B 2 19.483 12.138 34.416 1 24.08 ? C9 WHQ 501 A 1 HETATM 24 F F1 WHQ . . . B 2 20.62 10.618 35.795 1 24.36 ? F1 WHQ 501 A 1 HETATM 25 N N1 WHQ . . . B 2 21.327 6.593 32.017 1 22.56 ? N1 WHQ 501 A 1 HETATM 26 N N2 WHQ . . . B 2 20.227 6.031 32.502 1 26.18 ? N2 WHQ 501 A 1 HETATM 27 N N3 WHQ . . . B 2 20.419 11.967 33.305 1 24.1 ? N3 WHQ 501 A 1 HETATM 28 N N4 WHQ . . . B 2 23.897 1.722 32.398 1 35.39 ? N4 WHQ 501 A 1 HETATM 29 O O1 WHQ . . . B 2 22.936 11.641 30.545 1 43.12 ? O1 WHQ 501 A 1 HETATM 30 S S1 WHQ . . . B 2 24.462 5.138 30.009 1 30.39 ? S1 WHQ 501 A 1 HETATM 31 H H7 WHQ . . . B 2 18.66 11.233 37.476 1 31.65 ? H7 WHQ 501 A 1 HETATM 32 H H8 WHQ . . . B 2 22.264 4.043 32.488 1 29.55 ? H8 WHQ 501 A 1 HETATM 33 H H9 WHQ . . . B 2 22.939 6.854 29.774 1 30.14 ? H9 WHQ 501 A 1 HETATM 34 H H21 WHQ . . . B 2 24.703 12.173 29.983 1 46.83 ? H21 WHQ 501 A 1 HETATM 35 H H17 WHQ . . . B 2 23.871 13.328 30.552 1 46.83 ? H17 WHQ 501 A 1 HETATM 36 H H16 WHQ . . . B 2 23.583 12.797 29.143 1 46.83 ? H16 WHQ 501 A 1 HETATM 37 H H5 WHQ . . . B 2 16.719 13.869 35.066 1 27.28 ? H5 WHQ 501 A 1 HETATM 38 H H6 WHQ . . . B 2 16.952 12.658 37.186 1 29.94 ? H6 WHQ 501 A 1 HETATM 39 H H12 WHQ . . . B 2 23.894 -0.093 33.171 1 54.24 ? H12 WHQ 501 A 1 HETATM 40 H H13 WHQ . . . B 2 25.258 0.598 33.28 1 54.24 ? H13 WHQ 501 A 1 HETATM 41 H H11 WHQ . . . B 2 24.794 0.026 31.935 1 54.24 ? H11 WHQ 501 A 1 HETATM 42 H H15 WHQ . . . B 2 23.911 11.103 32.132 1 35.26 ? H15 WHQ 501 A 1 HETATM 43 H H14 WHQ . . . B 2 22.863 12.189 32.403 1 35.26 ? H14 WHQ 501 A 1 HETATM 44 H H1 WHQ . . . B 2 18.705 6.902 33.359 1 30.96 ? H1 WHQ 501 A 1 HETATM 45 H H2 WHQ . . . B 2 23.118 8.809 31.518 1 30.76 ? H2 WHQ 501 A 1 HETATM 46 H H3 WHQ . . . B 2 19.067 9.774 33.595 1 30.25 ? H3 WHQ 501 A 1 HETATM 47 H H4 WHQ . . . B 2 20.75 12.656 32.894 1 28.86 ? H4 WHQ 501 A 1 HETATM 48 H H10 WHQ . . . B 2 23.088 1.893 32.661 1 42.41 ? H10 WHQ 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 227 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 48 #